Lucilia sericata (common green bottle fly): 119612101
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Entry
119612101 CDS
T08270
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119612101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119612101
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119612101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP40_S1
KH_6
Rrp40_N
RRP4_S1
RRP40_N_mamm
ECR1_N
Motif
Other DBs
NCBI-GeneID:
119612101
NCBI-ProteinID:
XP_037823759
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
MPEIVMPGDRITAAEEMAKXKKVILGPGLRRQDEQVVACKAGTLQHKEPNTFWVESYQRR
YVPVRGEAVIGVVTAKAGDIFRVDIGGCEQASLSYLAFEQATKKNRPDVNTGDLVYARLI
VASKDFEPELVCVNSVGKKGKLGVLPDGFVFNCSLNLARMILREDCPLLAALTKEMPFEI
AVGLNGRIWIKAKSVKETIAVGNAILAAEHASNEQIAKICENIGNILFT
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatagttatgcccggtgatcgtataacagccgctgaagagatggctaaanca
aagaaagtaatattgggacccggtctgagaagacaagacgaacaagttgtggcctgcaaa
gccggaacactacaacacaaagaacccaacacattttgggtggaaagctatcagaggaga
tatgtgcccgtaagaggagaagcagtcattggtgtagtgacagccaaggcaggtgatatc
tttcgtgtcgatataggaggctgtgaacaagcctctctttcctatttggccttcgaacag
gccaccaagaaaaatcgtccggatgttaatacaggcgatttagtgtatgcccgccttata
gtggcaagtaaagatttcgaacccgaattggtgtgcgtcaattcggtgggtaaaaaagga
aagctgggagtacttccagatggatttgttttcaattgtagtttaaatttggcacgtatg
attttgcgcgaagactgcccacttttggcggcgctaacaaaggagatgccatttgaaatt
gcggtaggtttaaatggacgcatctggattaaggcgaagtcggtgaaagaaactatagca
gtgggtaatgctatattggcggcagaacatgcctccaatgagcaaattgcaaaaatatgt
gaaaatattggaaatatattatttacttga
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