Lucilia sericata (common green bottle fly): 119612245
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Entry
119612245 CDS
T08270
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119612245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119612245
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119612245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
119612245
NCBI-ProteinID:
XP_037823934
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MDTNESPTNSVAGKNKTKSKTTAIGEFKSIEEFTKKGLSEIIEATKCANAFPQGASRDLY
CAYPTYGRVIDEQSHRILGLISHVLKWQNVKGNIQRRQPDEQFEMLLECNDVMFERLQSN
LDELAGIKKNPQTIVVESRLNSISTGATPGKGAGSWNLKNNDSSPTIAARLITAKNIARP
QVKFQIPVDNSAETPFVPKIKDKPNSLKPLAILPEYDEHGNVVSYLHPYEYELMKFEAPN
SLLKPRQPQKPKDTAQTELMYVDSPAKLRQALEELRTATELAIDVEHHSYRTFLGFTCLV
QISSRTKDYIFDALELREEMQLLNEVFTNPKIVKIFHGADSDVEWLQRDLSLYIVNMFDT
HQAAKALNFARLSLAYLMKHYCDIEIDKTFQLADWRIRPLPQELVAYARQDTHFLIYIYE
RLTNDLLEAAHQQPQLLRSIYQRSNEICKKRYNKPTINADSHMDLYRKSKRIFDNRQLYA
YSEIFKWRDTIARLEDESYGYVLPNHMMLQISESLPREMQGILACCNPIPPLVRQHLHTL
HQIILKARDQPLVKPILEAEASHRVAYANVKDYNSKLHCPHDLSHHEEFRDDLPTLISFD
KEKGVKFNTDVESLGKTKIKKPVLSVFDTPENSEEDEQTIRHQLVEKQKILLPYQRYMAV
LPMVEKEKREEAARIDAENKKRQLCPQAPTLMPVEKDSKDAINIKKEDDMYSMPIREMLK
RKYEESVAKKAANSAAAKRIKTEENSITTTTPTDDKLKFVNLPPTKKELKQQKQLKRPAP
QDNSTTTISDDEDEQEVVEDDDVEDGPPEERPTSSRPLDGQVSKNKFKNKNKKGKFQNSG
KAYQSSDKPVQTNFDYQKVDFKKFQGGAQKAKGTELKPQFHGKGNSSKAQNKKFNKLFTF
SNVKANKK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggataccaatgaaagtccaacaaatagcgtagctggtaaaaataaaacaaagtctaaa
actactgccataggagaatttaaaagcattgaagaatttactaagaaaggtttatcagaa
attatagaagccacgaaatgtgccaacgcctttcctcaaggagcctctagagatctttat
tgtgcttatcctacttatggacgtgttatcgatgaacaatcgcatagaatattaggtctt
atatcgcacgtgttaaagtggcaaaatgttaagggcaacatacaacgccgccagccagat
gaacaattcgaaatgctattggagtgcaacgatgtcatgtttgagagactgcagtctaat
ctagatgaattagctggcatcaaaaagaatccacaaaccatagtagtagagtcgcgcctc
aattccatatcaacgggagcgactcccggcaaaggtgctggcagttggaatttgaaaaat
aatgacagtagtcctacaatagctgccagattgattacagccaaaaatattgccagacca
caggtgaaattccaaataccagtggacaatagtgccgaaacaccatttgtacccaaaatt
aaggacaaaccaaattctctaaaacctttggctattttgcccgaatacgatgagcatggc
aatgtggtcagctatctacatccttatgaatatgagttaatgaaatttgaagcacccaac
agtttgttgaaaccgcggcaaccacaaaaaccaaaagatactgcccaaacagaactgatg
tatgttgattcacctgctaagctaagacaagctttggaagagttgcgaacagctacagaa
ttagcaattgatgttgaacatcattcctatcgtactttcctgggtttcacttgtttggta
cagatttccagccgcactaaagactatattttcgatgctctggaattgagggaagaaatg
caactgctcaatgaggtttttaccaatccgaaaattgtaaaaatcttccacggtgctgat
tcggatgttgaatggctgcagcgcgatctatcgttgtacattgttaatatgtttgatact
caccaggcggcgaaagctttaaattttgcccgtctatccttggcatacttaatgaaacat
tattgtgacatagaaatcgataaaacttttcaactagccgattggcgtatacgaccttta
ccccaagaactggtggcatatgccagacaagatacacatttcctcatctacatttatgag
cgtctgaccaatgatctcttggaggcagctcatcaacaaccacaattattgcgctcgatt
taccagcgctctaacgagatttgtaaaaaacgttataataaacctacaattaacgccgat
tctcatatggatctttatcgcaaatcaaaaagaatctttgacaatcgtcaactatatgct
tatagcgaaatatttaagtggcgtgataccatagcccgtttggaagatgaaagttacggc
tacgtcttacctaatcacatgatgttacaaatatctgaaagtttaccacgtgaaatgcaa
ggtattttagcttgctgtaatcccataccgccattggtacgacaacatttacacactctt
catcaaattattttaaaggctcgtgaccaacctttggttaaaccaattttagaagctgaa
gctagtcaccgcgtggcttatgcgaatgttaaagattacaatagtaaattacattgtcct
cacgatttgtcgcatcatgaagagtttagagatgatttgccaactttgattagtttcgat
aaggaaaaaggtgtcaagttcaataccgatgtcgaatcattgggtaaaacaaagattaaa
aagccggtcctaagtgtattcgatacaccagagaattccgaagaggatgaacaaacgata
cgtcatcaacttgttgaaaaacaaaaaatacttttaccttatcagcgttatatggcggtt
ttgcctatggtagaaaaagagaaacgtgaagaggcagctcgcatagatgctgaaaataag
aaacggcaattatgtccacaagcaccaactcttatgccagtcgaaaaagactctaaagat
gccattaatatcaaaaaggaagatgacatgtatagtatgcctatcagggaaatgctgaaa
cgtaaatacgaagagtcagttgctaagaaagccgcaaattctgctgcagctaaacgtatt
aaaaccgaagagaatagtataacgacgacaacaccaacagatgataaattgaagtttgtt
aatttgcctccaaccaaaaaagaacttaaacaacaaaaacaacttaaaagaccagctccc
caagataattctaccactacaatatccgacgatgaagacgaacaagaagttgtagaagac
gatgatgtagaggatggaccacccgaagaaagacccacctcttcacgtccgcttgatggc
caagtttcgaaaaataaatttaaaaataaaaataagaaaggaaaattccaaaactctggc
aaagcttatcaatcgtctgacaaacctgtgcaaacaaatttcgattatcaaaaggtggac
tttaagaaattccagggaggagctcagaaagctaaaggcacagaattgaaacctcaattt
catggcaagggcaactccagcaaggctcaaaacaagaaatttaataaactatttacattt
tctaatgtaaaggcgaataaaaaataa
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