KEGG   Lucilia sericata (common green bottle fly): 119612397
Entry
119612397         CDS       T08270                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
lsq  Lucilia sericata (common green bottle fly)
Pathway
lsq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119612397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsq03041]
    119612397
Spliceosome [BR:lsq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    119612397
 Complex C
   U5 SnRNP specific factors
    119612397
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_NOL10_N DUF6333
Other DBs
NCBI-GeneID: 119612397
NCBI-ProteinID: XP_037824131
LinkDB
Position
Unknown
AA seq 346 aa
MAKRPSNSLVLMQDPKKSKQDLIAYTNRDKALMEAGVRRTSNLLAPIMLLEGHQGEIFCT
EFHPDGEMLLSSGFDRQIYIWNVYGDCENILAMSGHTGAVLEAHFNTEGSQIFTCSTDKT
LAVWDIVTGNRIRRLKGHNNFVNSVHGTRRGLQMLCSGSDDRTIRIWDARKKLSVHTLEA
PYQVTAVTFNDTAEQVISGGIDNELKVWDIRKQQVLHSLKGHTDTITGISLSPDGSYILS
NSMDNTLRIWDIRPYVPGERCVKIFQGHQHNFEKNLLRCAWSPDGSKISAGSADRYVYIW
DTTSRKILYKLPGHNGSVNDVDFSGKEPLIVSGSSDKNLYLGEIED
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggctaagagaccaagtaacagtttagtgctaatgcaagacccgaaaaagtctaaacaa
gacttaatagcctatacaaatcgtgataaggctttaatggaagcaggagttagaagaacc
tccaacttattggctcctattatgctattggaaggtcatcagggtgaaatattttgtacc
gagtttcatccggatggtgaaatgttgctatcctctggattcgaccggcagatatacatt
tggaatgtttatggtgactgtgaaaatattttggccatgtccggtcatacgggtgctgtt
ttagaggctcattttaatacagaaggttcgcaaattttcacttgttccacagataaaact
ttggccgtatgggatatagtaaccggcaatcgcattagacgtttaaagggtcataataat
ttcgttaattctgtgcatggtactcgtcgtgggctacaaatgttatgttctggttctgat
gatcgcactatacgtatatgggatgcacgcaaaaagctgtccgtacacacactagaagca
ccctatcaagttacagcagtgacctttaacgatacggccgaacaagttatatcaggcggt
attgataatgaattgaaggtatgggatataagaaaacagcaagtgctgcacagtttaaag
ggtcatacggatactattaccggcatttctctatcacccgatggttcctatatcttatcg
aattctatggataatactttacgcatttgggatatacgcccctatgtgccgggtgagcgt
tgtgttaagatattccagggccatcaacataattttgagaaaaatcttttacgttgtgcc
tggtcaccggatggtagtaaaatatcggccggttcagctgatcgctatgtctacatttgg
gatactacaagtcgtaagatattgtataagttgccgggccataatggcagtgtcaatgat
gtagattttagtggcaaagaaccactgattgtatcagggtctagtgataagaatttgtac
ttgggagaaattgaagattag

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