Lucilia sericata (common green bottle fly): 119612724
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Entry
119612724 CDS
T08270
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03030
DNA replication
lsq03410
Base excision repair
lsq03420
Nucleotide excision repair
lsq03430
Mismatch repair
lsq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119612724
03410 Base excision repair
119612724
03420 Nucleotide excision repair
119612724
03430 Mismatch repair
119612724
03440 Homologous recombination
119612724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsq03032
]
119612724
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119612724
Enzymes [BR:
lsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119612724
DNA replication proteins [BR:
lsq03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
119612724
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
119612724
MMR (mismatch excision repair)
DNA polymerase delta complex
119612724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
VWC2L_2nd
DUF6079_6th
Motif
Other DBs
NCBI-GeneID:
119612724
NCBI-ProteinID:
XP_037824505
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MSNFANKRKFAGAAATNGAPKKPRNYDDEDDDMGGGGFEVDFNNDDMDMTQLMGEGPENQ
QTSVKWSRVDPPELDCETDALIFQQIDIENYIGAPLPGMPGARMGPVPVIRMYGITMEGN
SVCCHVHGFCPYFYLAAPKGFEQKHCHELRSALDKKVLADMRGGNKDNVQEAVLSVELIE
RLNIYGYQGDSKQKYIKITLSLPKFVAAASRLLKKEVIYNEFDFQDCRAFENNIDFDIRF
MVDCDVVGCNWIELPAGSWRQRGRNSKPLPESRCQLEVDVAFDKFISHEPEGEWSKVAPF
RILSFDIECAGRKGIFPEPKIDPVIQIANMVIRQGDPEPFIRNVFTLKTCAPIVGSQVLC
FDTEKELLDKWSSFVREVDPDILTGYNINNFDIPYLLNRAAHLKVQNFEFLGRIKNIRSV
IKEQVLQSKQMGRRENKYVNFEGRVPFDLLFVLLRDYKLRSYTLNAVSYQFLQEQKDDVH
HSIITDLQNGDEQTRRRLAMYCLKDAYLPLRLLDKLMSIVNYMEMARVTGVTLESLLTRG
QQIKVLSQLLRKAKTKGFIMPSYSSQGSDEQYEGATVIEPKRGYYADPISTLDFASLYPS
IMMAHNLCYTTLLQPGMKDKLGLSDKDYEKTPSNNTFVKATVRRGLLPEILESLLAARXR
AKNDLKVETDPFKRKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTSYGRTMIE
LTKNEVESHYTRANGYENDAVVIYGDTDSVMVNFGVKSLERSMELGKEAADLVSAKFVRP
IKLEFEKVYYPYLLINKKRYAGLYFTRPETYDKMDCKGIETVRRDNSPLVANLMNTCLQK
LLIERNPDGAVEYVKQVISDLLCNRIDISQLVITKELAKTDYAAKQAHVELAAKMKKRDP
GTAPKLGDRVPYVICAAAKNTPAYAKAEDPLYVLENSVPIDANYYLEQQLSKPLLRIFEP
ILGDKAESILLKGEHTRTRTVVTSKVGGLAGFMTKKSSCLGCKSLMPKGYENEPLCPHCK
PKMGELYMKEVVAKRQMEEKFARLWTECQRCQGSLHEEVLCSNRDCPIFYMRQKIRMDLD
TQEKRVRRFGLPEW
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattttgctaacaaaagaaaatttgctggagcagcagccacaaatggggcacct
aaaaagcccagaaattacgatgacgaagatgatgatatgggcggaggtggttttgaagtt
gatttcaacaatgatgacatggacatgacccagttgatgggtgagggtccagaaaatcaa
cagacctctgtcaaatggtctcgcgtagatcctcctgaactagattgtgaaacagatgct
ttaatatttcaacaaatagatattgaaaactacataggagctcctctgccgggcatgccc
ggtgctcgcatgggtccagtaccggttatacgcatgtatggcataaccatggagggtaat
tctgtgtgttgtcatgtccatggcttttgtccgtatttctatttggctgcccccaaaggc
ttcgagcagaaacattgtcatgaactaagatcggccttggataagaaggttttggctgac
atgcgtggcggcaacaaggataatgtacaggaggcggttttaagtgtggaattgatagaa
cgtttaaatatttacggctatcagggggatagcaagcagaaatatatcaaaataactctt
tcgctgcccaaatttgtggctgccgcttcacgtttattgaagaaagaagttatttacaat
gaatttgatttccaggattgtcgtgcctttgagaataacatagattttgatatacgtttt
atggtggactgtgatgtagtgggttgtaattggatagaactgcctgcaggctcatggcgt
caaaggggacgcaattccaaacctctacccgaaagtcgttgccagttggaggtagatgtt
gcgtttgataaattcatatctcatgagccagaaggtgaatggagtaaagtggctcctttt
cgcatattatcctttgacatagaatgcgctggtcgcaagggcatatttcctgagcctaaa
atcgatcctgttatacaaattgccaatatggtgatcagacaaggtgatcccgagcccttt
atacgcaatgtttttacattgaaaacctgtgctcccatagtgggcagccaggttttatgt
tttgatactgaaaaagaactgctagataaatggtctagttttgtgcgtgaggttgatcca
gatatattaaccggttataatatcaataattttgacattccctatctgctgaatcgcgcc
gctcatctgaaagtgcaaaactttgaatttttgggtagaattaagaatatacgttcggtt
atcaaagaacaagttctgcaatctaaacaaatgggtcgtcgtgaaaataaatatgtaaat
tttgagggtagagttccctttgatttgctgtttgtactgctaagagattacaagctaaga
tcctatactctcaacgctgtgagttatcagtttttgcaagaacaaaaggatgatgttcac
cacagcattatcaccgatttgcagaatggtgatgagcaaactcgtcgtcgtttggccatg
tattgccttaaggatgcctatttgcctttaagacttctcgataaacttatgtctattgtc
aactatatggaaatggccagagtaacgggagttaccttagaatctctactcactagaggc
caacagattaaggtgttgtctcagttgttgcgcaaagccaaaactaaaggtttcattatg
ccctcttattcgtctcagggatcggatgaacagtatgaaggcgccacggttattgaaccc
aaaagaggttattatgccgatcctatatcaacacttgattttgcttctctatatcctagt
ataatgatggcccataatttgtgttataccacgctcttgcaaccgggcatgaaagataaa
ttgggtttaagtgataaagattatgagaaaacaccctccaataacacctttgtcaaggcc
accgtccgtcgtggtttattgccggaaattttggaatctttattggctgctcgtnaaaga
gccaaaaacgatttaaaagtggaaactgatcccttcaaacgcaaagtgttggatggtcgt
caattggctttgaaaatatctgctaattctgtatatggtttcacaggagcccaggtgggt
aagctaccttgtttggaaatttctggttcggttacctcttatggtcgcaccatgattgag
cttaccaaaaatgaggtagaatctcattatacacgagccaatggttatgaaaatgacgct
gtagttatttatggtgatactgattcagtaatggttaactttggcgttaaatcgctggaa
agaagtatggaattgggtaaggaggcagccgatttggtatcagcgaaatttgttagaccc
attaaattggaattcgaaaaggtgtactatccttacttgctgatcaataagaaaagatat
gccggtttgtattttacacgaccagaaacctacgacaaaatggattgtaaaggtattgag
acagtgcgtcgtgataattctcctttggtggctaatctcatgaatacttgcttgcaaaag
ttgctaattgaaagaaatcctgatggagcggttgaatatgttaaacaagttatatcggat
ttactgtgtaatcgcatagacatttcacagttggttattaccaaggaattggccaagacc
gattatgctgccaaacaggctcatgtggagctggctgcaaaaatgaagaaaagagatcct
ggcacggcacccaaattaggagatcgtgttccctatgttatatgtgcagcagccaaaaat
acaccagcctatgctaaagctgaagatcccttatatgtgctagaaaacagtgtacctata
gatgccaattattatttagaacaacagttatccaaacctttactaaggatattcgaacct
attttaggagataaagcggaatcgattttattaaagggtgaacatacccgcactcgcaca
gtggtcacctccaaagtaggtggtttggcgggctttatgacgaaaaaatcttcctgtttg
ggttgcaaatctctaatgcccaaaggctatgaaaatgaaccgttgtgtcctcattgcaaa
cctaaaatgggtgaattatatatgaaggaagtagtggccaaacgccagatggaagagaaa
tttgcccgcttatggacagaatgccaaagatgtcagggttcattgcatgaagaagtatta
tgttccaatcgtgattgtcccattttctatatgagacaaaagatacgtatggatttggat
acacaggaaaaacgagtacgacgttttggtttacccgagtggtga
DBGET
integrated database retrieval system
