Lucilia sericata (common green bottle fly): 119613478
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Entry
119613478 CDS
T08270
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119613478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119613478
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119613478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
RGS
AAA_27
Importin_rep_6
ANC1_spectrin
SBP_bac_3
GCP_C_terminal
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
119613478
NCBI-ProteinID:
XP_037825427
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MEAINANKQEPQLNLDTNARRNFVKFLQKQGEKPVTTVRFFDRTDSYSVHGPEDSDLISR
LVYKSTAYIRQLLADDGQPSPYVMLSKSNFELAVRELLLVRNYRVEVYVRRSTGGEWQLE
YRGSPGNLLQFEDILFSNKEILVGNSILSLQLRVQNNQRNLGVASVEQNDCLFQVVEFVD
DDFFTELEATVVLLGPKECLLPQQDGEYEAVKNLLERNGVMVTVPPKSANNEKNDLIQDL
NHLLRFAKGQQEDATGMPELQLTIAMEALRVAIKYTDLVNDAGNLGHYQIKQLNLKRFVH
LDAAAVSALNILPKPGTHFSSPSYRWQSVLGVLDHCRTAQGHRLMAQWVKQPLRSREILN
DRHNIVQCFLESPTTLNSLHEEFLKRIPDVLMLTKKLLRQKANLQDIFRIYQVMLRTPKI
VNALLSLENATVKSVLCDPLKSYLEDLSGLKQMVEQVMDFDAIETGEYLVKASFDSELLE
MKERMSKLLHKMEKLQEKAAQELDLDKNQNVKLLNVSHVGYHFRITLRDDSALRKNKNYK
IIDVVKGGIRFTSEKLTEINDEFVSLRTRYEEQQKNIVEEIVKVAVGYAAPLTSLNNEFA
QLDCLVSFAIAAQTAPTPYIRPKILPEGAGELVLKDIRHPCLELQEHITFIANNVEFKKD
KCNMFIITGPNMGGKSTYIRSVGTAVLMAHVGSFVPCSEATISMVDSILGRVGASDNIIK
GLSTFMVEMIETSGIIRSATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLF
ATHFHEITNLADTVKTVKNCHMAAVADNENFTLLYQVRPGVMEKSFGIQVARLANFPEKV
VQNAQQVYNEFEDEHANKQSQEDKDLLDKINKAIQDLSTTGNNKDINEKDLSQLVEQFTK
DIKKLDSEYFKAVLTTAVGEN
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggaggctattaatgctaataaacaagagccgcaacttaatttagacaccaatgcccgg
cgaaattttgtaaaatttttacaaaaacagggtgaaaaacctgtcactaccgtgcgtttt
ttcgatcgcactgattcctattctgttcacggcccggaagattccgacttaatttctcgt
ctagtttataaatccaccgcctatatacgccaattgctagctgatgatggacagccttca
ccctatgtcatgctttccaagtcaaatttcgaattggccgttcgagaactattgctagtg
cgtaattatcgtgtggaagtctatgtacgccgttctacgggcggtgagtggcaattagag
tatcgcggctccccgggtaatcttttgcaattcgaggatattctcttttccaataaggaa
atactggtgggcaatagcattttgtctttgcaattgcgtgtgcaaaataatcagcgtaat
ttgggtgtagcttcagtggaacagaatgattgtctttttcaagtggtggaatttgtggac
gatgattttttcactgaattggaagctacggtggtgctattgggtcccaaggagtgtttg
ctgcctcaacaggatggagagtatgaagctgttaaaaatctcttagaacgtaatggcgtt
atggtcacggtgcccccaaaatccgccaacaatgagaaaaatgatttaatacaagatcta
aatcatttactacgttttgctaaaggtcaacaagaagatgctaccggcatgcctgaacta
cagcttacaattgccatggaggctctaagagtagccataaagtatacagacctcgtcaat
gatgctgggaatttgggtcactatcaaataaaacaattaaatcttaaaagatttgttcat
ttagatgctgcagccgttagtgcccttaatatcctacccaagccgggaactcatttctcc
tcaccttcctataggtggcaaagtgttttgggagtactcgatcattgtcgcactgcacag
ggtcatcgtttaatggctcaatgggttaagcaacctttaagaagtcgggaaattttaaat
gatcgccataacatagtacaatgctttctcgaatcgcccaccaccttaaactctttacat
gaagaatttctaaaacgtatacccgacgttttaatgcttaccaaaaagttactacgtcaa
aaggccaatttacaagatatctttcgcatttaccaggtcatgttgcgtacccctaaaata
gttaatgctctgctctctttggaaaatgccaccgttaaaagtgttttatgtgatcccctc
aaaagttatctagaagatctttcgggactcaagcaaatggtagaacaagtaatggacttc
gatgccatagaaactggtgaatatttggttaaagcttcctttgattctgaattactcgaa
atgaaagaaagaatgtccaagttactacacaaaatggaaaagttgcaggaaaaggctgcc
caagagttagatttggataaaaatcaaaatgttaaattattaaatgtctcacatgttggt
tatcattttcgcattaccctaagagatgacagtgcattgcgtaaaaataaaaactataaa
ataattgatgtcgttaagggtggcatacgttttacctcggagaaattaaccgaaatcaat
gatgaatttgtttcgttacgcacccgctatgaggagcagcagaaaaatattgtagaggaa
atcgttaaagtagctgtaggttatgctgctcccttgacaagtctcaacaatgaatttgct
caattggattgtttggttagttttgccatagcagctcaaacggctcccacaccctatata
agacccaagattttgcctgaaggtgctggggaattagtgctaaaagatattcgtcatcct
tgtctggaattacaagagcatattacctttatagccaataatgtggagtttaagaaagat
aaatgtaatatgtttattataactggtcccaatatgggtggcaaatctacctatatacgt
tcggtaggtaccgctgttttaatggctcatgttggctcttttgttccttgttctgaagcc
actatatccatggttgattccatattgggtcgtgtgggtgccagtgataatattattaag
ggcttgagcacctttatggtggaaatgattgaaacttcgggtattataagatctgccaca
gataaatctttggtcattattgatgaattgggtagaggtacttctacctatgagggttgc
ggtatagcctggtctatagcagaacacctcgctaaagaaaccaaatgtttcacactcttt
gccacacatttccatgaaattaccaatcttgccgatacagttaaaaccgttaaaaattgt
cacatggctgccgtagcagacaatgaaaacttcacgctcctatatcaagtaagacctgga
gtaatggaaaaatcatttggtatacaagtggctcgtttggcaaattttcccgaaaaggtg
gtacaaaatgcccaacaagtttacaatgaatttgaagatgaacacgccaataaacaatcg
caagaagataaagatctgttggataaaattaataaagccattcaggatttatcgactacg
ggcaataataaggatataaacgaaaaagatttatcacaattggtagaacaatttaccaag
gatattaaaaaattggatagtgaatactttaaggcggttttaacaacagcagtgggtgaa
aattga
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