Lonchura striata (white-rumped munia): 110467605
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Entry
110467605 CDS
T05897
Symbol
DCP2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110467605 (DCP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110467605 (DCP2)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
110467605 (DCP2)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110467605 (DCP2)
mRNA degradation factors
5'-3' decay
Decapping complex
110467605 (DCP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
110467605
NCBI-ProteinID:
XP_021380476
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All DBs
Position
Z:complement(5394020..5415021)
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AA seq
419 aa
AA seq
DB search
METKRAEIPSSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFNHCPFLLPQGEDVQKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKEEYIELRINDQLARLYIIPGV
PKNTKFNPKTRREIRNIEWFSIDKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLREWIS
RRNGDSSDSDNGFSSAGSAPSKSNLEKARSKLRCSQQVLTDGVSGEHLVKPKQPQKPSNH
PEVSEVLKIKQSQNLKNNGRKQNQDTSSQKKRTNGLHSQPVKQNNTLKCEKRLNPRRLQD
NFETAEAAYEMCCSSEDALPEHVDGHSMACNGHYKFVFSSRAFLSFKFDHDAIMKSFDL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacgggccgagatccccagcagcgtcctggacgacctatgcagccgattt
attttgcacattccaagtgaagagagagacaatgcaatcagagtgtgttttcagattgaa
cttgcccattggttttatttggatttctacatgcaaaacacaccaggattacctcagtgt
gggataagagactttgctaaagctgtcttcaatcactgcccctttttactgcctcaaggt
gaagatgtacaaaaggttttagatgagtggaaagaatacaaaatgggagtgccgacctat
ggtgcaattatccttgatgagacacttgaaaatgttcttttggttcagggctatttagca
aaatctggttggggatttccaaaagggaaagtaaataaagaagaggcacctcacgactgt
gctgctagagaggtgtttgaagaaactgggtttgacataaaagattatatctgcaaagag
gaatacattgagctgcgaatcaatgatcagttagcacggctgtatatcattcctggagtt
ccaaagaacacaaaattcaaccccaaaactagaagggaaattcggaatattgagtggttt
tccatcgacaaattaccatgccacagaaatgacatgaccccaaagtccaagctgggtttg
gcacctaacaaattttttatggcaattcccttcatcaggccattgagggaatggatttcc
cgaaggaatggagactcctcagacagtgacaatggtttttcatctgcagggagtgcaccc
tctaagtccaacttggaaaaagctagatccaaacttcgctgtagtcagcaggtgcttaca
gatggcgtttcaggagagcacttggtgaagccaaaacagccacagaagccatctaatcat
cctgaggtgtctgaagttttgaaaataaagcagagccagaacctgaagaacaatggcaga
aagcaaaatcaagacacttccagccaaaagaagcgaacaaatggactgcacagtcaacca
gttaagcaaaacaataccttgaaatgtgaaaaaaggcttaatccaagaagacttcaagat
aactttgaaacagcagaagcagcctatgagatgtgttgctccagcgaagacgcactgcca
gaacacgtagatggacattctatggcatgcaatggccattacaaatttgttttttcatca
agagctttcttgagtttcaagtttgaccatgatgccataatgaaaagttttgacctctga
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