Lonchura striata (white-rumped munia): 110467621
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Entry
110467621 CDS
T05897
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110467621 (PIF1)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110467621 (PIF1)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110467621 (PIF1)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110467621 (PIF1)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
110467621 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Herpes_Helicase
AAA_16
Mg_chelatase
ABC_tran
PhoH
AAA_7
Motif
Other DBs
NCBI-GeneID:
110467621
NCBI-ProteinID:
XP_021380503
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Position
8:complement(19862662..19869184)
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AA seq
606 aa
AA seq
DB search
MEAAELRCTAAVEQPLPGGLAPRRRVMRNATVLLGRNELRQPVLRVAGGSGAAAAVLSFV
LAGDAVRLFTRFAGEGRAAVRVGPDGAQVLLSDCPPDALRRFLRLLRLKVAAGSRDAPRR
PRLLERPPPSFSVISPVQERDLLCGPGRRRPGEERGERPAEVPRAERRPPARLSAEQEAV
LGAVRSGKSIFFTGSAGTGKSFLLKRIVGSLPPNVTYPTASTGVAACHIGGTTLHAFAGI
GSGKAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDEPFG
GIQLIICGDFLQLPPVSKANEETKFCFQAKCWRKCIHINMELTEVRRQTDKTFVSILSAI
RLGRCTEEVTRQLMQTAAHKSERDGILATRLCTHKDDVDITNERRLQQLPGEVHVFEALD
SDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKGLPKV
RFLCGVTQLIKMEKWVIKGASGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFE
SGQAYVALSRARSLAGLRVLDFDPKAVRADPAVLQFYRHLRRHQLLAQDSLHTHSDTDEK
ENWKCN
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagctgcgctgcacggcggccgtggagcagccgctgccggggggactc
gccccgcgccgccgcgtcatgcggaacgcgaccgtgctgctgggccgcaacgagctgcgg
cagcccgtgctgcgggtggccggcggcagcggcgcggcggcggcggtgctgagcttcgtg
ctggccggtgacgccgtccggctcttcacgcggttcgcgggcgaggggcgggcggcggtg
cgcgtggggccggacggcgcccaggtgctgctgtccgactgccccccggacgcgctgcgc
cgcttcctccgcctcctgcggctcaaggtggccgccgggtcgcgggacgcgccgcgccgc
ccccgcctgctggagcggccgccgccgtccttctccgtcatcagcccggtgcaggagcgg
gacctgctgtgcggccccggccgccgccgccccggcgaagagcggggggagcgcccggcg
gaggtgccccgcgccgagaggcggcccccggcgaggctctcggcggagcaggaggcggtg
ctgggcgccgtgcgcagcgggaagagcatcttcttcaccggctctgcagggaccgggaag
tcgttcctgctgaagagaatcgtgggctccctccctccgaacgtcacctaccccacagcc
agcacgggagtggcggcttgtcacatcggtggcactactctgcatgcctttgcagggatc
ggctctgggaaggcaccgctggaacagtgcattcagcttgcagagaggccaggggtgcgc
cagcattggctggcctgccagcacttaattattgatgagatttcaatggtggatggcaag
ttctttgacaagctggaagcagtggcaagggctgtcagaaaacgggatgagccttttgga
ggaattcagctaattatctgtggggatttcttacagctacccccagtctccaaggctaat
gaagaaaccaagttctgcttccaggcaaaatgctggaggaaatgcatccacataaacatg
gagctgactgaagtgcggagacagactgacaagacctttgtctcaatcctgagtgcaatc
cgtttaggcaggtgcacagaggaggttaccagacaactgatgcagacagctgctcacaag
tctgagcgtgatgggatcctggctacgaggctctgcacccataaagatgatgtagacata
accaatgagagacgcttgcaacagctaccaggagaagtgcatgtgtttgaggctttggac
agtgacccaatgctagtgaagttaattgatgctcagtgtcctgtgggtggtagagttgag
ctaaagctcggagctcaggtgatgttagcaaagaatcttgatgtgtctcaagggctagtg
aatggggcacgaggtgttgttgtagggtttgaaagtgaacagaaggggttgcctaaggtg
aggtttctttgtggggtcacacagctcataaaaatggagaaatgggtcattaaaggagca
tcaggagttcatctgagtcgccagcaattacctttaaaattggcatgggccatttccatt
cacaagagtcagggcatgtctttagactgtgtggaaatctccctgtctcgtgtctttgaa
agtgggcaggcttacgtagccctctcccgagcccggagccttgcgggtctccgtgttctg
gattttgatccaaaagcagtgagagctgaccctgctgtgctgcagttctacagacacctg
agacgtcatcagcttctagcccaggattcattacacacccattcagatactgatgagaag
gagaactggaaatgcaactga
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