Lonchura striata (white-rumped munia): 110467649
Help
Entry
110467649 CDS
T05897
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110467649 (MED13)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
110467649 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
110467649
NCBI-ProteinID:
XP_021380548
UniProt:
A0A218UVJ0
LinkDB
All DBs
Position
19:8788215..8841044
Genome browser
AA seq
2180 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNNPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSSVGAPH
CSTACLGVHQVPASTRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCEEETADKVASWDFVEATQ
RTNCNCSRHKNLKPRNSGQQGQAPPVGPQQPAAPKHKTNEKQDKGDKPQKRPLTPFHHRV
SISDDVAMEADSASQRLVMAAPDSQVRFANIRTADGAKPPQLHGAELANSPQPPPLSPHP
CDGADEGVPKAPSTPQSQHFYQMPTPDPLVPTKAMEDRLDGLSQPFPATFPEVIEPTVYV
GTAVNLEEDEADTTWKYYKVPKKKDVEFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQYLTAVATEADQEPEIDPYAFVDGDVEFLFPDSKKDRQNIE
REVGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRLAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGTDDKSNCKEAKTGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDTTLGGTVLEGNSSTVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPPGPAMP
FIKDGDGSTMDQEYGPAYTPQTHTPFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATSIEHGSAGLKEPEKLPDDLILLLQDQCTN
LFSPFGAADQDSIAKVGAVSNLVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNDAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPSSQAASALPPVTAP
AANPNTPSSAPAAPASSTIAVTSSSSAMSSAATTANSTLTTTAPSSSSASLGSGIPTSKP
SSFPPFSNINNTTPASLPTQAAPVPNGQTGGQQQQPTLQTAGMSGDTAAAPAQPHPEVSE
STMDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMV
QVLPPHIKNIISVQIVPCQYLLQPVKHEDRQIYTQHLKSLAFSAFTQCRRPLPTSTNVKT
LTGFGPGLAMETALRSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGY
CLSHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMS
SLPWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACL
VAMEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASS
TYTTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPGGSPVHSPGSHYPHG
GDMGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPL
FLKASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRS
CLPIHFVVLNQLYNFIMNML
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggctgatctgactgggattaaatggaagcgctacgtgtggcagggcccaacgtct
gcccccatcctgttcccggtgacggaggaggatcccatcctcagcagcttcagccgctgc
ctcaaggccgacgtgctcagcgtctggcgccgggaccagaggcctgggcgcagggagctc
tggatattctggtggggggatgaccccaactttgctgacctgatccatcatgacctctca
gaagaggaagatggggtttgggagaacgggctgtcctacgagtgccgcactctgctgttc
aaagccgttcacaacctgctggagaggtgtctgatgaacaggaacttcgtgcgcatcggc
aaatggttcgtcaagccgtacgagaaggatgagaaacccatcaacaagagtgagcacttg
tcctgctccttcaccttcttcctgcatggggacagcaacgtgtgcaccagcgtggagatc
agccagcaccagcccgtgtacctgctcagtgaggagcacctcaccctggcccagcagtcc
aacaaccccttccaagttatcctgagcccctttgggttgaatggcacactcacagggcag
tccttcaagctttctgattcatccacaaagaaactgattggggagtggaagcaattctac
cccgtcacatccaacttgaaggagggatctgaggaaaaacaagaagaaatggattgggag
gatgattctttagctgctgttgaagtccttgttgctggtgtgaggatggtgtacccagcg
tgcttcgtgctggtccctcagacagacatccctgctcccagctccgtgggggctccccac
tgctccactgcctgcctgggggtccaccaagtgcctgcttccaccagagaccctgccatg
tcctcggtcaccctgacgccacccacgtcccctgaggaagttcagacagttgatgctcaa
tctgcccagaaatgggtgaagttttcctcggtttcagacggatttatctcggatagtacc
agccatcacggtggcaaaatccccagaaaactggccaaccaagtggtggacagagtctgg
caagagtgcaacatgaacagagcacagaacaagaggaagtattctgctacatcaaatggc
ttgtgtgaggaggagacagctgacaaggtggcatcctgggattttgttgaagccacacag
aggacaaattgcaattgttcaaggcacaaaaatctcaaaccaagaaattcaggtcaacag
gggcaggccccacctgtgggcccccagcagccggcggctccgaagcacaagacaaatgag
aagcaagacaaaggggataagccacagaaacgccctttgactccttttcatcatcgtgta
tctatcagtgatgatgttgccatggaggcagattcagcgagtcagaggcttgtgatggcc
gcaccagacagccaagtgaggtttgccaatatccgaactgccgacggagcgaagcccccg
cagctgcacggggccgagctggcgaactcgccgcagccgccgccgctcagcccccacccc
tgcgacggcgccgacgagggggtgcccaaggctccctccacgccccagagtcaacatttc
taccagatgccaacgcctgaccccttggtccccacaaaagcaatggaagacaggctcgat
ggcttgtcccagcctttcccagccacgttccccgaggttatagagcccaccgtgtacgtc
ggcactgccgtcaatttggaggaggatgaagctgacacgacttggaagtattacaaagtt
ccaaagaaaaaggatgtggagttcttaccgccccagcttccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaatgtaacttcagttacagaattaatggtgcaa
tgtaggaaacctttgaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
tatttaacagctgtagcaacggaagctgaccaggaacctgaaattgatccttatgccttt
gtggatggagatgtggaattcctatttcctgacagtaaaaaggacaggcagaacattgag
agggaagtggggaagaaacacaaggctgaggatgggacatccagcgttacagttctatcc
catgaaggagaggatgcaatgtctctgtttagtccttctgtcaagcaagatgcccagcgc
ttggctgcccacgcccgcactgcctcgaccagcctgttccacgagacagacctggtggtg
tcctacaccgacctggacaatctcttcaattctgatgaagatgaactcacacctggatct
aaacgaacagtgaacggcactgatgacaaatccaactgcaaagaggcaaaaacaggaaat
ctagacccactgtcatgcataagcactgcagatctccataaaatgtatccaactccccct
tcactggaacaacatattatggggttttctccaatgaacatgaacaataaggagtacggc
agcatggacactacacttggaggaacagtgctggaagggaatagctctactgtgggagct
cagttcagaatcgaagtagacgagggtttctgcagccccaaacctgctgaaatcaaggat
tattcttacgtttataaacctgaaaactgtcaagctttagtgggatgttccatgtttgca
ccactgaagactcttcccagccagtgtcttcctcccatcaaactgcccgaggaatgcatt
taccgccagagctggactgtgggaaagctggatctgcttcctccaggccctgccatgcct
ttcatcaaagatggtgatgggagcaccatggaccaggagtacggccctgcctacaccccc
cagacccacactccgtttgggatgcccccgagcagtgcccctcccagcaacggcggggct
ggaatcctcccttctccttccacccctcgcttcccaactcccagaacaccaaggactccc
cgcacgccccgcggagccggcgggcctgcgagcgcccagggctcagtgaaatacgagaac
tccgatttgtactccccagcttccaccccctccacgtgtcggccgctgaactcggtggag
cccgccacggtgccttccatccctgaggcacacagcctgtacgtgaatctcatcctctcc
gagtccgtcatgaatctcttcaaagactgcaacttcgacagctgctgcatttgcgtttgc
aatatgaacatcaaaggtgctgatgttggagtttacattcccgatccgacacaagaggcc
cagtataggtgtacctgtggtttcagtgctgttatgaatagaaaatttggcaacagttcc
gggctgtttcttgaagatgagttggatattctggggcgaaacacagagtgcggcaaagaa
gcggaaaaacgctttgaggctctcagagctacttccattgaacacggcagtgcagggctg
aaagaaccggagaaactgcccgatgacttgatactgttgctgcaggatcagtgcaccaac
ctgttctcaccctttggagcagcagaccaagactccatagccaaagttggtgccgtcagc
aacctggtacgtgtagaagaaagggattgttgcaatgactgctacttagccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaagttgacgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgtggtggatgtgagcatgcagtgttcccag
gacatcctgcgcatgctgctctcgctgcagcccgtgctgcaggacgccatccagaagaag
cgaacggtccggtcctggggtgtgcagggacccctcacgtggcagcagttccacaaaatg
gctgggagaggctcctacggaactgatgagtccccagaaccactgccaatcccaacattt
ttgttgggatacgattacgatttcctggtgctgtctccatttgcattgccctactgggag
aggctgatgctggaaccttacggatctcagcgagacgttgcttacgtggtggtgtgcccg
gagaacgaggctctgctcaacggagccaaaagcttctttagggatctgactgcaatatat
gagtcctgcaggcttggtcagcacagacctatctgtaagttactgcctgatgggatcatg
agggttggtcctacagcctccaagaagctctcggagaagttggtcacagagtggttctca
cagacagccaatgccaacaacgatgcgttctctaaactcaaactctatgctcaagtttgc
agatatgagctgggtccttatcttgcttctcagcctttggacaattctctactttcccaa
acaaacctggtccctccctccagccaggcagcctctgctctgcccccagtgacagcccct
gctgccaatcccaacactccgtcatcggctcccgcagctcccgccagcagcaccatcgca
gtgacctcctccagcagtgccatgtcctctgcagccactacagccaactccaccctgacc
accactgccccctcgtcctcctctgccagcctgggcagtggcattccaacgagcaagcct
tcctcattcccacctttcagcaatatcaacaataccactcctgcctccctgcccacccag
gctgcaccagtcccaaatgggcaaactggggggcagcagcagcagccaacactgcaaaca
gcagggatgtctggagacacggctgcagcacctgcacagccccatccagaggtttctgaa
agcactatggatcgtgataaagttggagtccccacagatggagattcacatgctatcacc
tatccacctgcaatagtagtttacataattgatcctttcacatatgaaaaaaaggatgag
aacagtagctcatccagtttgtggacacttggacttctgcgctgctttctggagatggtt
caggttcttcctccccacatcaagaacatcatttctgtgcagattgtcccatgtcagtac
cttctccagcctgtgaaacacgaggaccggcagatttacactcagcatttaaaatctttg
gcattttcagctttcactcagtgtcggagacctctcccaacttccaccaacgtgaaaacc
ttaactggctttggcccagggttagccatggaaactgctcttaggagccctgatagacct
gagtgtattcgactgtacacccctccttttatactggctccagtaaaggacaagcaaaca
gagctgggagaaacctttggagaagctggccagaagtataatgtgctttttgtgggctac
tgtttgtctcatgatcagaggtggctgcttgcatcctgtacagacctctatggagagcag
ttagaaacttgcataatcaatattgatgtaccaaacagagctcgcaggaaaaagggttct
gcccgcagacttggtctccagaaactctgggaatggtgcctgggacttgtgcagatgagc
tctttgccatggagagttgtcataggccgcttgggaagaataggacatggggaattaaaa
gactggagctgtttgctgagccgccggaacctgcagtccctgagcaagaggctgaaggac
atgtgcaggatgtgtgggatctctgctgcagactcccccagcattctcagtgcttgcttg
gtggccatggaaccccagggatccttcattattatgccagattccgtgtccacgggctcc
gtgttcgggcgcagcaccactctgaacatgcaaacgtctcagctgaacacgccccaggac
acgtcctgcactcacatcctggtgttccccacctctgcctctgtgcaagtggcatcatcc
acttacaccactgagaacctggatctggcctttaacacaaacaatgatggagcagatgga
atgggaatctttgacttgttagacactggagatgatcttgatcctgatattataaatatt
cttcctgcatctcctggtggatcccctgtgcattctccagggtcccactacccccacgga
ggtgatatgggcaagggtcaaggtacagatcgattgctttccacagaatctcacgatgaa
gtaacaaatatactgcagcagccactggccctcggttattttgtgtcaactgccaaagca
ggtccattgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttg
tttcttaaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccac
agtaaacactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctg
gaacagtacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtca
tgtctcccaattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctg
tga
DBGET
integrated database retrieval system
