Lonchura striata (white-rumped munia): 110467659
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Entry
110467659 CDS
T05897
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04142
Lysosome
lsr04144
Endocytosis
lsr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110467659 (CLTC)
04142 Lysosome
110467659 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110467659 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110467659 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110467659 (CLTC)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110467659 (CLTC)
Exosome [BR:
lsr04147
]
Exosomal proteins
Proteins found in most exosomes
110467659 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
110467659
NCBI-ProteinID:
XP_021380560
LinkDB
All DBs
Position
19:8627824..8657750
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKDMYQEAKLTDQLPLII
VCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVV
RGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRE
NPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELW
ASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNS
VFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD
VNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSS
YMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA
HIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEV
CFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGM
FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAII
TMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAV
TFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLA
QRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQW
FLQENKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEK
VDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQP
GFGYSM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatttgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaatttatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccggagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattgaaagctgggaaaacgctgcaaatctttaacatcgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgccggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcgcagcaaaaccgtgtagtgggagca
atgcagctgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgatctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcaggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaattctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctca
gaggagctgggagaccttgtgaaatctgtggatcctacactagcacttagtgtctatctg
agagccaatgttccaaacaaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactggagcacttcacagacctgtacgacatcaagcgtgcagta
gttcacactcacctcctcaaccctgagtggttagtgaattattttgggtccttatcagta
gaagactctctggagtgtctgcgtgcgatgctgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccacgaacagctgtcaacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttatttcctgggttccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggacatgtaccaggaagctaaactcactgaccagctgcctctcatcatt
gtgtgtgaccgctttgactttgtccacgacttggtgctgtatttgtatagaaataatctt
caaaaatatattgagatttatgtacagaaggtgaatccaagccgtctgccagttgttatt
gggggactgcttgatgtggattgctctgaagatgtgatcaagaacctcatccttgtagtg
agaggtcaattttcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaag
ctgcttctgccctggctggaagcaagaattcatgagggctgtgaggagcctgctactcac
aatgcactggccaagatttacattgacagcaacaacaacccagagagattcctgcgtgag
aatccgtactatgacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctg
gcctgcgtggcttacgagcgtggacagtgcgatctggagctgattaatgtgtgcaatgag
aactccctcttcaagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgg
gccagtgtgctactggaaagcaacccctacagaagacccctgattgaccaggttgtccag
actgcactgtcagagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatg
actgcagatcttcccaatgagctcattgaactgctggagaaaatcgtgctggataattca
gtgttcagtgagcacaggaatctgcagaaccttctcatccttacagctatcaaggctgac
cgcacccgtgtcatggagtacatcaatcgcctggataactatgatgcccctgacatagcc
aatattgctatcagcaatgagctttttgaggaggcatttgctatcttcaggaagtttgat
gtcaatacatcagctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtac
gagttcgctgagcgctgcaatgaacctgcagtgtggagccagctggccaaagcacagctc
cagaaggggatggtaaaggaggcaattgactcctacattaaagcagatgatccttcctca
tacatggaagttgttcaagctgctaatgccagtggaaactgggaagagctggtgaaatat
ctgcagatggcacgcaagaaggcccgggagtcgtatgtggaaacagaattaatctttgct
cttgctaaaacaaaccgcctggcagagctagaggagttcatcaatggccccaacaatgca
catatccagcaggttggtgatcgctgctacgatgagaagatgtatgaagcagccaagctc
ttgtacaacaacgtgtccaacttcggccgtttggcctcaaccttggtgcacctcggcgag
taccaggccgccgtggatggtgctcggaaagccaacagcactcgcacgtggaaagaggtc
tgctttgcttgtgtggatggaaaagaattccgcctggctcagatgtgtgggctccatatt
gtagtgcatgcagatgagctggaagagctaatcaactattaccaggatcgtgggtacttt
gaagaactcatcactatgttggaagcagcgcttgggctggagcgagcacacatggggatg
ttcacagagctggcaattctctactccaagttcaagccacagaagatgagggagcacttg
gagctgttctggtccagagtcaacattcccaaggttttgagagctgcagaacaagcccat
ctgtgggctgaactggtgttcctgtatgataagtatgaagaatatgataatgccataatc
acaatgatgaatcacccaacagatgcttggaaagaaggccagttcaaagatatcatcact
aaggtggccaatgtggagctgtactacaaggcagttcaattctatttggaatttaagcct
ctgctgctcaatgatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtc
accttcttcacaaaggttaaacagctgcccctggttaagccttacctgcgctctgttcaa
aatcacaacaacaaatcagtcaatgagtccctcaacaacctcttcattattgaagaagat
taccaggctcttaggacttctatagatgcttatgacaactttgacaacatttctcttgcc
caacgtttggagaaacacgagctaatagagttccgaaggatcgctgcctatctcttcaaa
ggcaacaaccgctggaaacagagcgtggagctctgtaagaaggacaggctctacaaggat
gccatgcagtacgcttctgaatccaaagatactgagctggcagaagagctgctgcagtgg
ttcttgcaggagaacaagagggaatgctttggtgcttgtctcttcacctgctacgatctc
ctaaggccggatgttgtcttggaaacagcgtggaggcacaacattatggactttgccatg
ccatactttattcaggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaag
gtggataaactggatgcatcagagtctttgagaaaggaagaggagcaagctacagaaaca
caacctattgtttatggccagccccagctgatgctgacagcgggacccagcgtggcagtt
cctccgcaggcacctttcggctacggctacacggcccctccgtacgggcagccgcagccc
ggcttcggctacagcatgtga
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integrated database retrieval system
