Lonchura striata (white-rumped munia): 110467670
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Entry
110467670 CDS
T05897
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110467670 (VPS53)
Membrane trafficking [BR:
lsr04131
]
Protein recycling
Others
EARP complex
110467670 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
110467670 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
HAUS1
GrpE
Laminin_II
TPR_CAND1
O_Spanin_T7
hAT-like_RNase-H
NBD94
Syndetin_C
COG3_N
COG5_N
MCPsignal
Snf7
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
110467670
NCBI-ProteinID:
XP_021380576
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All DBs
Position
19:8195174..8258590
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AA seq
832 aa
AA seq
DB search
MEEDEPELEAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRTGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPAEWCMTERIAVDFCHVTRAELSKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGSVQKKPEVPPPTTNPFLEDETGAETDEIVMEKSDTDKPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDTSLMERINLTGEMDTFSIVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKR
SEQSSMLDLFRLRLPAPPPGGDGSGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggaggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgccatcgagcaggtatttcccagccaagatccactggacagagcagat
ttcaatgctgtggagtatattaatgctctctttcccactgagcaatctttggcaaacatt
gatgaagttgtgaacaagatcagattgaaaataaggaggttggatgacaacatccgaact
gtggtgaggggacagaccaacgtgggacaggatggcaggcaggccctggaagaagcccag
aaagccattcaacagctctttggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggtgaaggaaatcaccagggatatcaagcagctggatcatgccaagcgccac
ctgaccacctccatcaccaccctcaaccacctccacatgctggcagggggggtggattct
ctggaggctatgaccaggaggagacaatatggggaagttgccaaccttctccaaggtgtc
gtgaatgtgttggagcacttcaacaaatacatggggatccctcagattcgacagctctct
gaaagggtgaaggcagcccagaacgagttggggcagcagatcctggctgacttcgaggaa
gcctttccttcccaaggtacaaagaggactggtggacccagcaatgtcctacgtgatgcc
tgcctggtagccaacgtcctggatcccaggatcaaacaggaaatcatcaagaaattcatt
aaacagcacctctcggagtatctggtccttttccaggaaaatcaagatgtggcctggctg
gataagattgaccggcgctacgcctggatcaagaggcagctggtggattacgaggagaag
tacgggcgcatgttccccgccgagtggtgcatgacggagcgcatcgccgtggacttctgc
cacgtcaccagggcagagctctctaagatcatgcgcaccagggcgaaggagattgaggtg
aaattgcttttgtttgcaattcagagaacaaccaacttcgaggggctcctggccaagcgc
ttctcaggctgcactcttgctgatggctcagtgcagaagaagccagaagtgccacctccc
accaccaacccctttctggaggatgaaactggggcagagacagatgagattgtgatggag
aaaagtgatacggacaaaccaaagaagccaaaggtccctgacaatcctttccatggcatt
gtttccaagtgctttgagcctcacctttatgtgtatattgagtcccaggacaagaatctg
ggagagctgattgacaggtttgtggctgacttcaaggctcagggtccccccaagcccaac
gtggatgaaggaggagctgtgctgcccagctgtgctgacctctttgtgtactacaagaag
tgcatggtgcagtgctcccagctcagcactggggagcccatgatagccctgaccaccatc
ttccagaaatacctgcgggaatacgcctggaaaatcctctctggaaacctgcccaagaca
accagcagcagtggtgggctcaccatcacaagtttgctgaaagaaaaggaaggctctgaa
gtggcaaagtttactttagaagaactttgcctcatttgcagcatcctgagcactgcagaa
tattgtctggccaccacccagcagttggaagagaagctgaaagaaaaagtggatacaagc
ctaatggagagaatcaacctgacaggagagatggacactttcagcattgtgatctccaac
agcatccagctgttggtgcaggacctggatgcagcctgtgaccctgccctgactgctatg
agcaagatgcagtggcagaacgtggaacatgtcggtgaccagagtccttatgtcacctca
gtgatcctccacattaaacagaatgtccccatcatccgtgacaacctggcctccacgagg
aagtatttcactcagttctgcataaaatttgcaaactccttcattcccaagttcattaac
cacctcttcaagtgcaaacctatcagcatggtgggtgcagaacagctgctgctggacact
cactctctgaagatggttctcctggatctgccctccattgggtcccaagtggtgaggaag
gctcctgccagctacacaaagatagtggtgaaaggcatgactcgggctgaaatgatcctg
aaggtggtgatggctccacacgagcccccagtcgtgtttgtggacaattacatcaagctt
ctcgctgactgcagcactgacacattccagaagatcctcgacatgaagggcctgaagagg
agtgagcagagcagcatgttggaccttttccgcctgcgcctccccgctcctccccccggc
ggggacggctccggctcgctctcgctgagcgctcccacgcccgagcaggaatcctcccgc
atccgcaagctggagaagctcatcaagaagagactctga
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