Lonchura striata (white-rumped munia): 110467708
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Entry
110467708 CDS
T05897
Name
(RefSeq) pinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lsr04030
]
110467708
G protein-coupled receptors [BR:
lsr04030
]
Rhodopsin family
Vision
Opsin
110467708
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srh
CitMHS
Motif
Other DBs
NCBI-GeneID:
110467708
NCBI-ProteinID:
XP_021380641
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Position
19:8362272..8364904
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AA seq
348 aa
AA seq
DB search
MDSTQEPPNSSTPGPFDGPQWPHQAPRATYVAVAVLMGLVVASASVLNGLVIVVSIRHKR
LRSPLNYILLNLAVANLLVTLCGSSVSLSNNVSGFFVFGERLCQLEGFMVSLTGIVGLWS
LAILALERYLVVCRPLGDFRFQHQHAASGCAFTWGWSLLWTTPPLLGWSSYVPEGLRTSC
GPNWYTGGSNNSSYILALFVTCFVVPLSLILFSYTNLLLTLRAAAAQQRESDTTQQAERE
VTRMVVVMVVAFLTCWLPYTTFALVVATNKDIVIQPALASLPSYFSKTATVYNPIIYVFM
NKQFQSCLLGMLCCGHHPRGMGKTSPAAPSPQVAAEELRNKVTPSHPV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacagcacccaggaacccccaaacagcagcaccccggggcctttcgatggcccccag
tggccccaccaggccccccgggccacctacgtggcggtggccgtgctgatggggctggtg
gtggcctcggcctcggtgctcaatggcctggtcatcgtggtgtccatcaggcacaagcgg
ctgcgctcgcccctcaactacatcctgctgaacctggccgtggccaacctgctggtgact
ctctgcggcagctccgtcagcctctccaacaacgtcagcggcttcttcgtcttcggggag
cggctctgccagctggagggcttcatggtgtccctgacgggcatcgtggggctgtggtcc
ctggccatcctggccttggagaggtacctggtggtctgcagacccctgggagactttcgg
ttccagcaccagcacgctgccagtggctgtgccttcacctggggctggtccctgctctgg
acaaccccaccactcctgggctggagcagctacgtgcctgaaggcctgagaacctcctgc
gggcccaactggtacacgggtggcagcaacaacagcagctacatcctggccctgtttgtc
acctgctttgtggtgcccctcagcctgatcctcttctcctacaccaacctgctgctgacc
ctgcgggcggccgcggcgcagcagcgggagtcggacacgacgcagcaggcggagcgggag
gtgacgcgcatggtggtggtcatggtggtggccttcctcacctgctggctgccctacacc
acctttgcgctggtggtggccaccaacaaggacattgtcatccagccagccctggcatcc
ctgccctcctacttctccaagacggccacggtttacaaccccatcatctacgtcttcatg
aacaaacagttccagagctgcctgctgggaatgctgtgctgtggtcaccacccgcggggg
atggggaaaacctctccagctgcccccagtccccaggtcgctgcagaggagctgaggaac
aaggtgacaccatcccaccccgtgtga
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