Lonchura striata domestica (Bengalese finch): 110467844
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Entry
110467844 CDS
T05897
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04510
Focal adhesion
lsr04512
ECM-receptor interaction
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110467844 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110467844 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110467844 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
110467844
NCBI-ProteinID:
XP_021380867
LinkDB
All DBs
Position
2:101564376..101661077
Genome browser
AA seq
3083 aa
AA seq
DB search
MGSGGRRLLALLAATSLLWVPGQGQPRGLFPAILNLASNAHISTNATCGEKGPEMFCKLV
EHVPGRPLRNAQCRVCDSHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLDL
RQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPPT
YKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLRLQRIRT
LNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCQCE
HNTCGESCNKCCPGYHQKPWRPGTLSAGNKCEKCNCHNKAEDCYYNQSIADQKRSMDIHG
QFIGGGVCLNCTQHTTGINCEMCADGYFRPHKVSPYEDHPCYPCDCDPLGSLSSVCVKDE
HHSDSQHGTWPGQCQCREGYAGEKCDHCAFGYRGYPNCLRCNCSLVGSINEDPCTEPCLC
KENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQISDMTGWLVTDL
YKERSVQPQRSQFDGPHQISINNTEAVKVLKNTYYWSAPEAYLGNKLTAFSGDLKYTVSY
DIPMESVDSDIVSSVDVIIQGNRQILSTRAAGLSLQPYEEYSNSVRLVSENFIDFNTKKA
IDREMLMTVLANVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVEFCECPQ
GYTGLSCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGPFCDQCL
PGFYGNPSQGTSEDCQPCACPLSSAANNFSPTCQLSEEGGIVCDKCLPGYTGSQCERCAN
GYYGNPLMPGQSCAPCECNGNVNPQEEGHCDPSTGQCLKCLGNTAGHHCEKCADGYYGDA
VTDRNCRACACHVNGSLSSTCQHETGVCSCKSNVIGEKCDKCLNGYYGLLTGLGCVPCNC
SQFGSVSEDCNHQGQCHCVPGVAGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNADSGQ
CICPPHTQGQKCELCEENYWGLSPKLGCKACNCSGAGSANFQCNVLTGQCQCKIEFGGRD
CSRCALGYRDYPDCVACDCDLSGTKAETCNDTEGVCGCEEETGVCTCKENVFGLQCSECK
PGTFGLSANNALGCSPCFCFGMSTSCSELEDHVRIPITLTPDQAILHVVAQSNLTGTVEG
VFSQFPDVLLDAAIVRKYLNTETFYWKLPEQFQGDQLMAYGGKLRYTVAFYALDGFGTSN
FEPQILMKGGQTSKLVIYVDIPSPENGVRTDKEVEMKEDSWKYFNSVSDEPVLHSDFMSV
LSNIEYILIKAAYGQGLQQSRIANISMETAVKFEEMHIGRPVAHLVEQCRCPAGYTGLSC
QSCAPGYYRGRHTELGVREQHTLIAPCVPCQCNNHSETCDPDTGKCLNCRDNTVGDYCSA
CAPGYYGKVTGSASDCSPCACPRANPVSFSPTCVLKGVQDYHCDACLPGYEGQYCERCSP
GYYGDPQLAGGSCRLCQCDPGGSVHGDCDGATGQCLCKPGVTGQLCQECEPRHLLLQDQC
VSCDDNCTGVLLNSLDDLNEAILSVNLTGIDLMPYGILTELENAAQHLKRSVVPREDPTY
SLDTAKENLLNLSGGIDYLHEETTRFLKKAQQLDTMTQKTRNKSQELTGFIDTVHSTIKV
LAEVALSLNETLGLDLPLSDATSQSLQDDISALLDALRKKDFVQQHHNATTVLKVAEKLL
TQVQKEYLKPQQELAELKTNASQFLSKQNSRLQDAQDLVNEALANINETHRLFPLISSNL
AELNDKKLKINEGEEISTMLIQEGEVLLNDAAALAQDVENSTFNVEVHQDGLVLWSTKLR
HHVDELVMQMSVRGVLDLVYRAEEHATQFQRLADALESDLSRVRNLTLNTAAAIYTHSSV
QSVIERIESLADDASKAVNGPLDLSFSLLGKEALLLTSKFQNEAKSLKKKGDGLLFGLNG
LNKKVEKIQESTNKIGNQLNDSLLALRGLPNNTRKYMLEVKELAVSANTSAVVDLSHFGE
FSQKLMNTSSTLSQVNDTLRKTSELITDSTKAALKAEKQVKEVEAQASLLLDRLKPLKML
EENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVKTAEP
DNLLFYLGSNGKPDFLAVEMRRGKVALLWDLGSGSTRVEYPDLQIDNNKWHRIHATRFGK
TGTLSIEEMNSNQKPSPKSGTSLGTASILDVNKSTLMFIGGLGGQIKKSPAVKVTHFKGC
LGEASLNGKSIGLWNYIEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQILI
SFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRVTVDLGSGPLALTTENRYNNGTWYKIS
FNRNKKQGILAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIFIGGLPRSRALRKGLNS
RMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIHSVSIMNNGYIELLPKSLNPESELM
ATFATKNSSGIILVGLSKGLEKRQRRQAHLPFFSIMLIDGHLAVHVNAGDRASTRKVVLQ
SANGTYSDGQEHSVILIRNKRIITVQVDESKPAELRLGSAAENSPINISNFYAGGIPAGE
GILGLKLAGSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKTAVQPSNIVIQP
ELQALPVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSAVRKKLSVQLNLRTFASSGLI
YYMAHQNQVDYAALQLYGGQLHFSFDLGKGKAVALHPAVVSDGKWHTVKMEYVKRKGTII
VDGQELVAVNALGDGSTLDVEGKLYVGGLPLDYIPKNLGNVSHSIPACIGNMTINGNQLD
NESPVSIFAVNKCYETVQDGTFFDGSGFAALAREGYKVRSDVNITLEFRTTAVHGVLLGV
SSAKVDAIGLEIVHGKILFHVNNGAGRITTTYEPRGTNSLCDGKWHKLQANKSKHHISLV
IDGNLVHTDNPYVHSTSADTNNPIYVGGYPADVKQNCLTSKSSFRGCLRNLVLTKGQHTE
LFDFSRAFDLRGVFPHSCPGAEH
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggcgggcggcggctgctggcgctgctggcggcgacttcgctgctgtgggtg
ccggggcagggccagccccgaggcctgtttcctgccattttgaacctggccagcaatgct
cacatctccaccaatgctacctgcggggagaagggaccagagatgttctgcaaactggtg
gagcacgtccccggacggcccctgcgcaacgctcagtgccgcgtctgtgacagtcacagc
gccaatcccaaagagcagcacccaatttccagtgcaatcgatggtaccaataactggtgg
cagagtcccagcattcagaatggcaggcaataccactgggtcaccatcactttggattta
aggcaggtctttcaagttgcatatgtcatcatcaaagctgctaatgctccacgacctgga
aactggattttggaacgctccatagatggcacagagttcagaccatggcagtactatgca
attagtgatactgaatgtttaactcgttacaatattacaccaagaattgggccgccaact
tacaagagagatgatgaagtgatctgcacctcctattattccagactagttcccctggaa
cacggagagattcacacatcactgatcaatggtaggcctagtgctgatgatccttcacag
aagctgttggaatttacttctgcacggtacattcgcctgcgactgcagcgtattagaact
ctgaatgctgacctcatgactctcagccataatgatcctaaggagctagaccctattgtt
accagaaggtactactattcaataaaggacatctctgttggtggcatgtgtatttgttat
ggccatgctcgaagctgcccactggatgaaatcacaaagaaattgcagtgccagtgtgaa
cacaacacgtgtggagagagctgtaacaagtgctgtccaggctaccaccaaaaaccgtgg
agaccaggaaccctttctgctgggaacaaatgtgagaaatgtaactgtcataacaaagca
gaagattgttattacaaccagagtattgcagatcagaaaaggagcatggatattcatggc
caatttataggaggtggtgtgtgtttaaactgtactcaacatactactgggatcaactgt
gaaatgtgtgctgatggatattttagaccacacaaagtttctccctatgaggatcacccc
tgctatccctgtgactgcgaccctcttggctctctgagttctgtctgtgttaaagatgag
caccattctgactctcagcatgggacttggccaggccagtgtcagtgcagggaaggttat
gcaggagaaaaatgtgatcattgtgcatttgggtatcgaggttacccaaactgcctgcgt
tgtaactgcagcctggttggtagcatcaatgaagatccatgcacggaaccttgtctttgc
aaagaaaatgtagaaggtgaaaactgtgatctctgtaaaccaggattctacaatttgcaa
gaaagaaatcctcagggctgcacagagtgtttttgctttggtgtttctgatgtctgtgac
agtcttacatggcccatcagtcagatttcagacatgactggatggctcgttactgatctg
tacaaagaaaggagtgtgcagcctcagcgaagccagtttgatggaccccatcaaataagt
attaacaacactgaggctgtgaaagtactgaaaaacacttattactggtcagcacctgag
gcatatctaggaaataaacttacagcttttagtggagacttgaagtatacagtatcttat
gacattccaatggagagtgtggacagtgatatagtgtctagtgtggatgtcatcattcag
ggtaacaggcagattctgagtacaagagcagcaggcttatcattacagccatatgaggag
tattctaattcagtgagacttgtgtcagagaatttcatagattttaatacaaaaaaggca
atagaccgggaaatgttgatgactgttctggcaaatgtaacccatcttctgatcagggcc
aactacaacattgccaaaaaggctgtgtacaggctggactccgtgaccctggatactgca
agtgcaaatgttatagatctttcttcagcaccagatgtagaattctgtgaatgccctcag
ggttacaccggattatcctgtgagtcctgtctccctgggtactaccgtgtggatggaata
ctctttggaggtatttgtcaaccctgcaagtgcaatggacatgcaactgagtgtgacatt
cacggtgtttgctttgcttgtcaacataacacaacaggacctttctgtgatcagtgcttg
cctggattctatggaaatccatcccaaggaacatctgaggactgccagccctgtgcatgt
cctctgagttctgctgcaaacaatttcagtcccacttgccagctgagtgaagaaggtggg
attgtctgtgacaaatgtcttccaggctacactggttctcaatgtgaaaggtgtgctaat
ggttactatgggaatcctcttatgcctggacagtcgtgtgctccttgtgaatgcaatggc
aatgtaaaccctcaagaagagggccactgtgatccctccacaggacagtgtctgaaatgt
ctagggaacacagcaggtcaccactgtgaaaagtgtgctgatgggtattatggggatgca
gtgactgacaggaactgtcgtgcctgtgcctgccatgtgaatggttccctttcaagtact
tgtcaacatgagacaggtgtctgctcctgcaaatcaaatgtaattggagaaaaatgtgat
aaatgcttgaatgggtattatgggctgcttactgggcttggctgtgttccctgcaactgc
agtcagtttggctcggtgtccgaggactgcaatcatcaggggcagtgtcactgtgtgcca
ggagtggctggagagaagtgtgatcgttgtgctcatggcttttatgcgttccaggatggt
ggctgcacaccctgtgactgtgcccatactcaaaacaactgtaatgctgattctggccag
tgcatttgtccccctcacactcagggacaaaagtgtgaactctgtgaagaaaattactgg
ggactttctcctaaacttggttgcaaggcttgcaactgtagcggtgctggttcagccaat
ttccagtgcaatgtgttgacaggtcaatgccagtgcaaaattgaatttggaggacgagac
tgttccaggtgtgccttgggctacagggactacccagactgtgtagcctgcgactgtgat
ttgagtggaaccaaggcagagacgtgtaacgacactgaaggagtttgtggttgtgaagaa
gaaactggtgtctgtacctgcaaggaaaatgtttttggtctacaatgcagtgagtgtaaa
cctggaacttttggtctgtctgccaacaatgcactaggatgttctccatgtttctgtttt
ggaatgtctacttcttgttcagaactagaagaccatgtgcgaattcctataacattaact
ccagatcaggctattctgcatgtagtagctcaaagtaacctgactggaacagtggaagga
gtattttcacaatttccggatgttttattggatgctgccatagttagaaaatatttaaat
acagaaacattttactggaagttgccagagcagtttcagggagaccagctcatggcctat
ggagggaagctgagatatactgttgccttttatgctttggatggctttggaacctcaaat
tttgagccacagattctaatgaaaggaggtcagaccagcaagttagtcatctatgtagac
atcccttctccagaaaatggagtaagaactgacaaggaagtagaaatgaaggaggattct
tggaagtattttaactctgtgtctgatgagcctgtcttacattctgacttcatgtctgtg
ctcagcaatattgaatacatccttatcaaggcagcttatggccaaggattacagcaaagc
agaattgcaaatatctcaatggaaactgcagtcaagtttgaagaaatgcatataggcaga
cctgtagcccatcttgtagagcaatgtaggtgtcctgctggttacactggattgtcctgc
cagagctgtgctccaggatactacaggggaaggcatacagaactcggtgtaagagagcaa
cacactctgatagcaccttgtgtgccgtgccagtgcaacaaccacagtgaaacctgtgat
cctgacactgggaagtgcttgaactgcagagataacacggttggtgattactgcagtgct
tgtgccccaggctactatgggaaagtaactggatctgccagtgactgctctccttgtgcc
tgtcctagggccaaccctgtcagttttagtcccacttgtgtcctgaaaggtgttcaggat
taccactgtgatgcttgtctcccaggatatgaaggacagtactgtgagaggtgctcccct
ggctactacggtgaccctcagcttgctggcggcagctgccgtctgtgccagtgcgatccg
ggcggttccgttcacggggattgcgacggtgccaccgggcagtgcctctgcaagccgggg
gtgacggggcagctctgccaggagtgtgagcccaggcatcttctgctgcaagaccagtgt
gtgtcttgtgatgacaattgcacaggagtcttgttaaacagtttggatgatctcaacgag
gccattctttcagtgaacctcactggtattgaccttatgccctatgggatattgacagag
ttggagaatgcagcacaacatctgaagaggtctgtagttcctagagaagacccaacttac
tcattagatacagcaaaagaaaatcttctgaatttatcaggaggaattgattacttgcat
gaagagacaactagatttttgaaaaaagctcagcaacttgatacaatgactcagaaaacc
aggaataaaagtcaagaactgactggctttattgacacagtacattcaaccatcaaagta
cttgctgaagttgctttgtcactaaatgaaacactgggcctggatctgccactgtcagat
gctacatctcagagcctgcaggatgatatttctgcacttttggatgcattgcgcaagaag
gattttgttcaacagcaccataatgctaccacagtcctgaaagttgcagaaaagttgttg
acccaggttcagaaagagtatctcaaaccccagcaggaacttgctgaactaaaaacaaat
gcaagccaattcttgtcaaagcagaacagcagactgcaggatgcccaggacctggtgaac
gaggcactggcaaacatcaatgagacccatcgcttgtttcctctcatctccagcaacctg
gcagagttaaatgacaaaaagctaaaaataaatgaaggtgaagaaatctcaaccatgctc
atacaagaaggggaggtcctactaaatgatgctgctgctcttgcccaagatgtagagaac
tctacatttaacgttgaagtccaccaggatgggttggtcctgtggagcaccaaactgcga
catcatgtggatgagctggtgatgcagatgtctgtgagaggagtccttgacttggtgtac
agagctgaggaacatgccacccagttccaaagacttgcagatgcactagagagtgacctt
tctagagtgagaaatttgactctgaacacagctgctgctatctacactcactccagtgtc
caaagtgtgattgaaagaatagagagtttggcagatgatgcatctaaagctgtgaatggc
cccttggatttatctttcagtcttctgggaaaagaagctctactgcttacctccaaattt
cagaacgaagctaaaagtctgaagaaaaagggtgatgggcttctatttggattgaatggg
ttgaacaaaaaagtagaaaagattcaggaaagtactaataaaattggcaaccaacttaat
gattctctgttggcactcagaggattgcctaacaataccaggaaatacatgctggaagtg
aaagagctggctgtgtctgcaaacaccagtgctgtggtagatttaagtcactttggagag
ttcagtcaaaagctaatgaatacatcttctacattgtcccaagttaatgacactttgagg
aaaacaagtgaactcataactgattcaacaaaagctgcattaaaagctgaaaaacaagtt
aaagaagttgaagcacaagcaagtcttttattggatagactcaaacctttgaaaatgctg
gaggagaacctgaacagaaacctgtctgaaattaaagaacttatcagccaggcccgcaag
caggcagcatctattaaagttgcagtatcagcagacagagattgcattcgtgcctatcaa
ccccaaatttcatctacaaattacaacaccttaacactcaatgtgaaaactgctgaacca
gataaccttctgttctacttgggtagcaatggaaagccagacttcctggcagtggagatg
cgacgtggtaaggtagctcttctttgggatttgggctctggatcaacgagagtggaatat
cctgatttacaaatcgacaacaacaaatggcacagaatacatgccaccaggtttggaaaa
acaggtacacttagcatagaggaaatgaactccaatcagaagccttcacctaaatctgga
acctctctggggacagccagcatattggatgtcaacaagtcaaccctaatgtttattgga
ggacttggagggcagatcaagaaatcacctgctgttaaggtgacccattttaaagggtgc
ctaggagaagcatccctgaatggcaaatctatcggtctttggaactacatagaaagagag
ggcaagtgcaatggctgttttggaagcccacaggacgaggacacctcattccattttgat
ggcagtggatactcggttgtggagaaggcactccgctcaacagtgactcagatactaata
tctttcagtaccttttcaccaaatgggcttcttctctaccttgcttcaaatggcactaga
gacttcttgtcccttgagcttgttgatggcaaagtgagggtgactgttgatcttggttca
ggacctcttgctcttacaacggagaatcgttacaacaacggaacctggtataaaatctca
ttcaatcggaataagaagcaaggaattctggcagtcatggatgcatataaccttaattat
aaagaaaccaagcaaggagaatctcctggggttgcctcagacctgaaccgctctgataag
gacccaatcttcattggtgggctgccaagatcgagggctctgaggaaaggtcttaatagt
agaatgtatgtgggatgcatcaagaatctggaaatatctcgttccacctttgacttgctt
agaaattcatatggagtaagaaaaggctgtgtattggagcctattcacagtgtaagcatc
atgaacaatggatatattgagttgctacctaaatccttaaacccagagtcagaactgatg
gcaacttttgctacaaagaacagcagtggcatcatcctcgttggactcagcaagggactg
gaaaagcgacagcgaagacaagcacacttgcccttcttttccatcatgctgattgatggt
catcttgcagtgcatgttaatgctggagatagagcaagtactaggaaagtagttcttcag
tctgctaatggaacatacagtgatggacaagaacactctgtcatcctaattcggaataag
aggatcataactgtacaggtggatgaaagtaaacctgcagaattgaggcttggttcagca
gcagaaaatagccccattaatatttccaacttctacgctggtggcattccagcaggagag
ggcatcttagggctaaaattggctggctcctttcatggctgtatcagcaaccttattttt
aacaaggagcttttatattttaccacttccatgaagtatgaacatgtggatatggacagc
tgctttctgtctgagaagcctaaaacagctgtacagccatcaaacattgtgattcaacct
gaacttcaggctttaccagtagtgtgtgcaaaagatgagctgcctgatcatgttcaaggt
gcccatcagtttggacttgccaaaggcagccacttgaccctactcttcaatcagtctgcg
gtcaggaagaaactttccgtccagctgaatctcagaacctttgcctccagtggcctgatt
tactacatggctcaccaaaaccaggttgattatgcagccctacagctttatgggggacag
ctccatttctcatttgatctaggcaaaggaaaagcagtagctcttcacccagctgttgtc
agtgatggaaaatggcatacggtaaagatggaatatgttaaaagaaaaggcacaatcatt
gtggatggacaggaactggtagcagtcaatgctctgggagatggtagcaccttggatgtg
gaagggaagctctacgtgggaggactccccttagactacataccaaagaatcttgggaat
gttagtcacagtattcccgcctgcattggtaacatgacaattaatggcaatcagctggac
aatgagagtcctgtctctatctttgctgtgaataaatgctatgaaacagtgcaagatggt
actttctttgatggaagtggctttgctgctcttgccagagaaggctacaaagtgcggtct
gacgtgaacatcaccctggagttccgcacaacagcggtgcacggcgttctgctcggcgtc
agcagcgccaaggttgacgcaattgggctggaaattgtacatggcaagattttattccat
gtcaacaatggagctggcagaataacgactacatacgaaccaagaggcacaaatagcttg
tgtgatgggaaatggcacaagcttcaagcaaacaaaagcaaacatcacatttcactggta
attgatgggaatttggttcacactgataatccctacgtccactcaacatctgcagatacg
aacaatcccatttatgttggaggttatcctgctgatgtcaagcaaaactgcctcacaagc
aagagttcattccgtggctgtttgaggaaccttgttttgaccaagggccaacatacagaa
ttgtttgactttagcagagcttttgacctgcgtggagtgtttcctcattcctgccctggg
gctgagcactga
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integrated database retrieval system
