Lonchura striata (white-rumped munia): 110467874
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Entry
110467874 CDS
T05897
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110467874 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110467874 (ATRX)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110467874 (ATRX)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110467874 (ATRX)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110467874 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
110467874
NCBI-ProteinID:
XP_021380943
LinkDB
All DBs
Position
4A:complement(17424652..17491479)
Genome browser
AA seq
2439 aa
AA seq
DB search
MTAEPVSESKLNTLVQKLHDFLAHSSEESEDTNSPPALSKNKSIGKSREPKGSPASMENN
RDEGSSSSERTKSLGSSRSKRKPTVVTKYVGSDDEQIVDETVNEDISNENSENDVDMQSL
PKGTVVVQPEPVLNEDRDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCTACGQQVN
HFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAF
CKKCILRNLGRKELSTILDENNQWHCYICHPEPLLDLVTACDSVFENLEQLLQQNKKKMR
VENEKSKIYDHTVKFSPKRNNANCNGEEKKLDNSYSGSLTYSYKALMVPKDLLKKTKKLI
ETTTNLNSSFVSFLKNAAENVEISPAVQLCQLKAFKSVLSDMKKAHLSLEEGLNLEIQAL
NVKIKDKNTKEKKTEVRSEKNEVKKDEGKEHAALQEDDATQTQEKVVLEQPDNEPMDQSV
PSAEQTDNKAAPGEEKKAGRNEEPQYEPNSTEALDMDIVSIPSSVPEDIFETLESAMEIQ
MPPDEQDSGNTAADHEAPNSNTKVNAPVKDTKGGTKLKSSAKGTKELIVKLTPVSLTESM
VKGEDQDNSLEKESKDIDASKDVDACKDADPSQPRAADSDSGKQNDNVGSEPSMEDDTVP
VEDPDLRRSPRVKTTPLRRPTDISPLTSNSEEDSNDTSNEKQRRKPSKQPRRKNDKRNTS
DSAADGASPNKLSKSKKPYDLGHSSDSDEVPAVLKEAGMMSRSSSDSESNSEAPAKNQKT
SDSQKSQPVKDENGKRKRKSSSSGSDLDAKRGKSPKNAAAAKKKRQNYSDSSNYDSELEK
EIQMLSKIDAAKKSKKKFSRKDDSYDSSEEEQKKKVSSKRKVNLKNKRAKSSEDDDAEKS
SPEKEINHSSKDKKMGKRSAAKDKISRDSKEKSAKGKRDESSDAEKSSLEKEESPEVKKK
KDLKKKKAQDDSSSESTEKSAKKEHKLESLKDRLKNKKGSESKTKKSEKLKKKGFKKEQD
DSSSDLDKSSPEKGSSNSSENDKIKKEPVFTEKRKLRERVATRVHIDLSSDTEKSPQKEE
SSDDDAMRHKKRTETKEKKKISHKKKISKKEQNDSSSSDEESYEDTKKKVKRGSVKESKK
SNLKKVAKKKVVVTSSSPSDKEENDDQNSTGDGSSDEQKIRPVTESLMLSADTGFCQSSG
DEGDALSRTIPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDTSSDEQPEEEKKKPA
KQTENTGADGEKEKEDKKSEKEEANSESDSEEEETSKKPRYRHRLLRQKLTVSDGESGEE
KKVVKPKDKKEGGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAE
ENQRSYKQKKKRRRIKVQEDSSSENENKSNSENEDNDDSKSPGKGRKKIRKIIKDDKLRT
ETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQ
VHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTV
LLCDKLDFRTGLVVCPLNTALNWLNEFEKWQEGLEDEEKLEVYELATVKRPQERSYMLQH
WQDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAV
SKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCAD
STPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYL
DHLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFI
ASDSDETSMSLSSDDYAKKKKSKGKKVTKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNV
EDLTNNPASTKSEEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAE
ELGDKVLVFSQSLISLDLIEDFLELANREKSERDQPSIYKGEGKWFRNIDYYRLDGSTTA
QSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVY
RFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEP
DLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERK
AAWAEYEAEKKGLTMRFNMPTGTNTMPTNFNSQTYIPYNLGALSAMSNQQLEDLINQGRE
KVVEATNSVAAARIQPLEDIISAIWKENLTLTESQVQALALNRQASQELDVKRREAIYND
VLGKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMGHLMMPKPPNLIMNPSSYPA
IDVRGMYQSVSGGMQPPPLQRAPPPMRGKNAGPSQGKSM
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccgtgagtgaaagcaagttgaatacattggtacagaaactccatgac
ttcttggctcactcatcagaagaatctgaggacacaaactctcctccagcattatctaaa
aacaaaagtataggtaaaagcagagaacctaaaggaagtccagcttcaatggagaacaac
agggacgaggggagtagctcttcggaaagaaccaaatccttaggatcatcccgttccaaa
aggaaacctacagttgtaacaaaatatgttgggtcagatgatgaacaaatcgtagatgaa
actgtaaatgaagatatttcaaatgagaactcagagaatgatgtagatatgcaaagcttg
cctaaaggtacagtggttgtacagcctgagccagtgctgaatgaagacagagatgatttt
aaagggcctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaag
cgtggagaagaaggactccatggaattgtgagctgtacagcctgtgggcagcaggtgaac
cattttcaaaaggattcaatctatagacaccctacactgaaagtgcttatttgtaagact
tgctacaaatattacatgagtgatgacatcagtcgtgattcagatgggatggatgaacag
tgtaggtggtgtgctgaaggtggaaatttgatttgctgtgacttttgccataatgccttc
tgtaaaaaatgcattttgcgcaacctgggccgaaaggagctctcaactatcctggatgaa
aataaccagtggcactgctatatttgccacccagagcctttgttggacttggtcactgcg
tgtgacagtgtctttgaaaatttagaacagttacttcaacaaaacaaaaaaaagatgaga
gttgaaaatgaaaaaagtaaaatatatgaccacacagtaaagttttctccaaagagaaat
aatgcaaattgtaatggggaagaaaaaaaattagataattcatattcaggttcactaaca
tattcttataaggcactaatggtgccaaaagacttgcttaagaaaacaaaaaaactgatt
gaaactacaacaaatctgaattctagctttgtaagctttctgaaaaatgctgcagaaaat
gtagaaataagcccagctgtgcaactgtgccagctgaaagcttttaaatctgtgctgagt
gacatgaaaaaagctcatctgtcactagaagaaggcctaaacctggagattcaagcactg
aatgttaaaatcaaagataaaaataccaaagagaaaaaaaccgaggttcggtcagaaaaa
aatgaggtgaaaaaagatgaaggaaaggaacatgcggcattacaagaggatgacgccaca
cagacacaggaaaaggttgtgttggagcagcctgacaatgagcccatggatcaaagcgtt
ccctcagcggaacagacagataacaaggcagctcctggggaagagaaaaaggctggcaga
aatgaagaaccccagtatgagcccaacagtacggaggctttagacatggatattgtgtcc
atcccctcatctgtacctgaagatatttttgagactctggaatctgctatggagattcag
atgccgccagatgagcaggacagtggaaacacagcagcagatcatgaggctccaaattca
aatacaaaagtgaacgctcctgtgaaagataccaaaggtggtaccaagttaaaatcatcg
gctaaaggaacaaaagaactgattgtaaaattgactccagtttctcttacagaatccatg
gttaaaggtgaagatcaagacaacagcctagaaaaggagagtaaagacattgatgcctct
aaagacgttgatgcatgtaaagatgctgatccatctcaacctagggcagcagattctgat
tctggaaaacaaaacgacaatgttggtagcgagccctcaatggaggacgacactgtgccc
gtggaggacccggatctccggaggtcgccgcgtgtcaagaccaccccgctgaggcgtcct
acggacatcagccccctgacatccaactcagaagaggacagcaatgacacgagcaatgaa
aaacagaggagaaaaccatccaagcaaccgaggaggaaaaacgataaaagaaatacttct
gacagtgctgctgatggggccagtcctaacaaactgtccaaatccaaaaagccatatgac
ttaggtcacagctcagactctgatgaggtgccagctgtccttaaagaagcagggatgatg
agtcgcagctcctcagacagtgagagcaacagtgaagcaccagcaaagaatcagaagact
tcagattctcaaaagagtcaaccagtaaaggatgaaaatgggaaacgaaaaaggaagagt
tccagttccggttcagatttagatgctaaaagaggcaaatcacctaaaaatgctgctgct
gctaaaaagaaacgacaaaactactctgattcttcaaactatgattctgagttggaaaaa
gagatacaaatgttgagtaaaattgatgctgcaaagaaatcaaagaaaaaattctcaaga
aaagatgatagttatgattcctctgaagaagagcagaagaaaaaagtaagcagtaagaga
aaggtaaatctgaagaataagagagctaaatcttctgaagatgatgatgctgagaagtct
tctccagagaaggaaattaatcactcttctaaagataaaaaaatgggtaagaggtcagct
gctaaggacaagataagcagagactcaaaagaaaaatctgcaaagggaaaacgtgatgag
tcatctgatgctgagaagtcttcactggaaaaagaggagagtcctgaagttaagaagaag
aaggatttgaaaaagaaaaaagcacaggatgattcttcttctgagagtactgagaaatca
gcaaagaaagagcacaagttggagtctttaaaagacagactcaagaacaaaaaaggatca
gaaagcaaaacaaagaaatctgaaaaattgaaaaagaaaggtttcaagaaagaacaagat
gattcctcttctgatcttgataagtcatctccggaaaaaggaagtagcaattcttctgaa
aatgacaaaattaaaaaggagcctgtgtttacagaaaagagaaaattgagagagagagta
gctacaagagtacacattgatttatcctctgatactgagaaatctcctcaaaaagaggag
agttctgatgatgatgccatgcggcataaaaaacgcactgaaacaaaagaaaagaagaaa
ataagccacaaaaagaagatttccaagaaagaacagaatgactcatcctcttctgatgag
gagtcttatgaagacactaagaaaaaagttaaaagaggatcagtaaaagaaagtaaaaag
agcaacttaaagaaagtggcaaaaaagaaggtggttgtcacttcctcttccccatctgat
aaggaagaaaatgatgatcagaattccacaggcgatggaagcagcgacgagcagaagatc
aggcccgtgaccgaaagcttgatgctgtctgctgatacaggattttgtcagtcatcagga
gatgagggagatgctctatcaaggactatcccaatggaggaggaggaagatgatgatgat
gacgaccctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaatctt
tcctctgatgaggatacgtcttcagatgagcagcccgaggaagaaaaaaagaaacctgca
aagcaaactgaaaacacaggagctgatggagagaaggaaaaggaagacaagaagtctgaa
aaggaagaagctaattctgagtcggattcagaggaggaagaaacatccaagaagcccaga
tacagacacagactgctgaggcagaagctcaccgtgagtgatggggagtctggagaagaa
aagaaggtggtgaaaccaaaagacaaaaaagaaggggggaagcgcagaaatagaaggaaa
gtgagcagtgatgactccaatgactctgagttccacgagtctgcagtgagtgaggaggtc
agtgagtctgaggatgaccagcggccaaggaccagatctgccaaaaaagctgaggcagag
gaaaaccagcgcagctacaaacagaaaaagaaacgaaggaggataaaggttcaagaggat
tcatcgagtgaaaatgagaataagagtaattctgagaatgaggataatgatgactcaaaa
tctcctggaaaaggcagaaagaagatcaggaaaattattaaagatgataagcttagaaca
gaaacacaaaatgcacttaaagaagaagaagaaagaagaaaacgtatagcagagagagaa
cgagagagagagaaattgagagaggtgatagagattgaagatgcctcacctctgaaatgt
cccatcacaaccaagctggttttagatgaagatgaagaaaccaaagaaccattagtgcag
gttcacaggagtatagtgaccagactgaaaccacaccaagtagatggtgttcagttcatg
tgggattgctgttgtgaatctgtaaaaaaaaccaagacatctcctggctctggctgcatt
cttgctcactgtatgggcctggggaaaacattacaggtagtaagttttctccacacagtc
ttgctgtgtgacaagctggattttcggacaggtctggtcgtgtgtccactcaacactgcc
ttgaactggctgaatgagtttgaaaaatggcaagaaggtttagaagatgaggagaaacta
gaggtctatgagctggcaactgtgaaaaggcctcaggagaggagctacatgctgcagcac
tggcaggatgagggaggtgtgatgatcattggctacgagatgtatagaaacctggcacaa
ggcaggaatgtgaagagtagaaaacttaaagaaatatttaataaagctttagttgaccca
ggtcctgactttgtggtgtgtgatgaaggacacatattgaaaaatgaagcatctgctgtc
tccaaggcaatgaattctattaaatctaggagaagaataattctgacaggaacaccactg
cagaataatcttatagaatatcactgcatggttaacttcattaaggagaatttgcttggc
tcaattaaggagttccggaaccgattcatcaatcccatccagaacgggcagtgtgcagac
tccactcctgtggatgtcagagtgatgaagaaacgtgctcacatcctctatgagatgttg
gctggctgtgttcagaggaaggattacacagcattaaccaagttcctgccccccaaatac
gagtacgtgctcgaggtgaggatgaccccaatccagtgcaagctgtaccagtattacctg
gatcatttgacaggtgtaggtggtggcaatgaaggtggaagaggcaaagctggagctaaa
ctattccaggatttccagatgttgagcagaatctggactcacccttggtgtttgcagctg
gactatattagcaaagaaaataagggctattttgatgaagacagcatggatgacttcata
gcttcagattccgatgaaacttccatgagcttaagttctgatgattatgcaaagaaaaaa
aaatccaagggaaagaaggtgacaaaagagtgtagctcgagtggaagtggcagtgataac
gatgttgaagtcattaaagtctggaattcaagatcacgtggaggtggggaaggaaatgta
gaagatcttacaaacaacccagcatcaacaaagtcagaggaaggcaaagctacatcctct
tccaatcctggtagcccagctccagactggtacaaagattttgtcactgatgcagatgct
gaggtgttggaacattctgggaaaatggtgctgctctttgaaattcttcgaatggcagag
gagctgggagacaaagttctagtgttcagccagtccctaatatctctggatttgatagaa
gatttcctggagctggctaacagggagaaatctgagagagatcagccttctatctacaaa
ggtgaaggaaaatggttcagaaatattgactattatcgtttggatggctcaaccacagct
caatccagaaagaaatgggctgaggagtttaatgatgaaactaatgtgagaggccgcttg
tttatcatatccactaaagcaggttccctgggaataaacctggtggctgctaacagagtc
atcatctttgatgcctcctggaacccctcctatgacatccagagcatcttcagggtttat
cgctttgggcagaacaagcctgtgtttgtctacaggtttttggctcagggaaccatggag
gacaagatctacgaccggcaggtgacgaagcagtcgctgtccttcagggtggtggaccag
cagcaggtggagcggcacttcaccatgaacgagctcaccgagctctacaccttcgagcca
gacctgctggacgaccccaactccgagaagaagaagaagagggacacccccatgctgcca
aaagacacaatcctggcagagctgctccagatcaacaaggagtacatagttgggtaccac
gaacatgattcactcctggaccataaggaggaagaggaactcactgaagaagagaggaag
gcagcctgggcagaatatgaagcagaaaagaagggcctgaccatgcgtttcaacatgccc
acagggaccaacacaatgcccacaaatttcaactctcagacatatattccttacaatttg
ggtgctctgtcagcaatgagtaaccaacagctggaggacctcattaatcaaggaagagag
aaggtagtggaagcaaccaacagtgtggcagcagcaagaatccagcctcttgaagacatc
atttcagccatatggaaagaaaacttaaccctgacggagagccaggtgcaggccctggcc
ctgaacagacaggcgagccaggagctggatgtgaagcgccgagaagccatttacaacgac
gtccttgggaaacagcagatgttaatcggttgtgtccagaggatcctgatgaacaggcgg
ctccagcaccagtacaaccagcagcagcagcagcagatgtcctaccagcaagcagccatg
ggccacctcatgatgccaaagcctccaaatttaattatgaatccttccagctacccagcc
atagatgtgagaggaatgtatcagtcagtgtctggtgggatgcagccaccacccctacaa
cgagcaccacccccaatgagaggcaaaaatgcagggccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
