Lonchura striata (white-rumped munia): 110467999
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Entry
110467999 CDS
T05897
Symbol
SEC24B
Name
(RefSeq) protein transport protein Sec24B isoform X1
KO
K14007
protein transport protein SEC24
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110467999 (SEC24B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110467999 (SEC24B)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110467999 (SEC24B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
110467999
NCBI-ProteinID:
XP_021381154
UniProt:
A0A218UTX1
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Position
4:25471986..25514968
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AA seq
1233 aa
AA seq
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MSAPAGLPPRPAAAAAAFSPGGPGSSPEAAAPAGGAPRCQNGPMQSQMQFPSGYGSHLPS
YSAPSGHYSQVPNKAAASHLDNQYRASYYPGYYSAPAQNVMTSVGSNVLNTQESHQLYNN
TPPHSGGSSDRPVQGAVSSASYLHVSAQQSYSAFDNHYSTSVSSSVASQGFPLNSDQYAM
PVVSGAMYPNVSYPPVAAGGVYGQTFTSQSLPAVGQFKETDAFSSQSTSVPHSLQQHVPM
GYNTTLSTVSSAQVVQDNLSRNLTGSVPKVNNQINTGGIDSSKPVHSVSQNVPFTKPGVG
TSASSAVMSSVRSPAPSLSSKPPSSPSVTQSRELALQEGMQYGGYVNNQASSAPAPLSSS
SDDEEEDEEDEEAALDSSSTTSSASPVLNNYDALEGGGYPETRSVTGSPVPSPSVVQTSK
ASKPFGYGYPALQPGYQNATPPTPVQPSNPGHHSGFQHYAQQYPGVNQLSSSLGGLSLQH
SQQPESLRPVNLTHDRNILPVSSVPAPVPNLNSDLRKLNCSPDSFRCTLTNIPQTQALLN
KAKLPLGLLLHPFRDLTQLPVITSSTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDV
PEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVESGY
LTILCQSLLENLDKLPGDSRTRIGFITFDSTVQFYNLQEGLSQPQMLIVSDIDDIFLPTP
DSLLVNLHESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRISVFQTQL
PSLGAGLLHSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLA
SLACMSKYSAGCIYYYPSFHHSHNPAQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSIH
TFHGNFFVRSTDLLSLANVNPDAGFAVQMSIEESLTDTSLVCFQTALLYTSSKGERRIRV
HTLCLPVVSSLTDVYAGADVQAVVCLLANMAVDRSVSSSLADARDALVNAVVDSLSAYMS
TASNLQQSMLIAPNSLKLFPLYILALLKQKAFRTGTSTRLDDRVYAMCQMKSQPLVHLMK
MIHPNLYRIDKLTDESTIHVNDRVVPQPPLQKLSAEKLTREGAFLMDCGSIFYLWIGKNC
DNNFIKDVLGYPNYASVPQKMTQLPEVDAPSSERTRSFISWLRDSRPLSPVLQVIKDENP
AKTDFFQHLIEDRTEAAFSYYEFLLNIQQQICK
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccgccgggctgccgccgcggcccgcagccgccgccgccgcgttttctccg
ggcgggcccggcagctccccggaggccgcggcccctgcgggcggcgcgccgcgctgccag
aacggtcctatgcagagtcagatgcagtttccctctggctatggctcacatcttccaagc
tacagtgcgccttcaggacactattcccaagtgcccaataaagctgctgcttcacatctg
gataatcagtacagagccagttactaccctggttactattcagcaccagcacaaaatgtt
atgacatctgtgggtagcaacgtgttgaatacacaggagtcacatcaattgtacaacaat
actcctccccattcagggggctccagtgacagacctgttcaaggagcagtatcatctgcc
tcctacttgcatgtgagtgctcagcagtcatattcagcttttgataatcactacagcact
tctgtcagctcttcagttgcatctcagggatttccccttaattctgatcagtacgctatg
cctgtggtttctggtgccatgtatcctaatgtttcctatcctcctgtggctgctggaggt
gtgtatgggcagacatttacctctcagagtctacctgctgttggacagttcaaagagaca
gatgcattttctagccagagtacatcagtacctcattctcttcaacagcacgttcccatg
ggatataatacaacgttatcaactgtttcatctgctcaggttgtgcaagacaacctcagc
aggaatctcaccggatctgttcctaaagtaaacaaccaaataaatacaggtggcattgac
tcttcaaagcctgtgcactcagtgagccagaatgttccatttaccaagcctggagttgga
acatctgcttcctctgctgtgatgtcctcagtaaggtcacctgctccaagcctgtcttca
aagccaccatcttcaccatctgttacacagtcacgagagctggcccttcaggaaggcatg
cagtatggtggatatgttaataatcaagctagctctgcaccagctcccttgtcatcaagt
tcagatgatgaggaagaggatgaggaggatgaggaagcagcacttgatagttcctctact
acaagcagtgcctctcctgttctgaacaattatgatgctctggaaggaggtggctatcca
gagacacgttctgtgactggcagtccagttccctctccatcagtcgtccaaacatcaaaa
gcttctaagccctttggttatggatatccagcactgcagccaggctaccaaaatgcaaca
ccacctactcctgtgcagcccagtaatccaggacaccattctggttttcagcactatgca
cagcaatatccaggtgtgaaccagctgtcctcttccttaggaggattaagtctacagcat
tctcagcagccagaaagcttgagaccagtaaaccttacacatgatagaaatattttaccg
gtatcttcagttccagcacctgtgcctaacttgaattctgatcttaggaaattaaactgc
agtccagactcatttcgatgtacattgacaaatattccacagacacaggctttgttaaac
aaagctaagcttcctttgggtttgttgcttcatcccttcagggatctgacgcaattgcca
gtgataacatcaagtacaatagtgagatgcagatcctgcaggacgtacatcaaccctttt
gtttctttcatcgatcaaaggcggtggaaatgcaacctgtgctatagagttaatgatgtt
cctgaagaatttatgtataatcctctgacacggtcttatggagagcctcacaaacggcca
gaggtgcaaaattctacagtggaattcattgcttcttcagactatatgcttcgtcctcct
cagcctgcggtatatttatttgttttagatgtgtctcataatgcagtggagtctggatat
ttgacaatactctgccagtcattgctggaaaacctagacaagctgcctggagattcaaga
acaagaatagggttcataacgtttgacagcactgttcagttttacaacttgcaagaaggt
ttatcacagcctcagatgctgattgtctcagatattgatgatattttcctacctacacca
gatagtttacttgtaaatctccatgaaagcaaagagctgataaaagatctattgaatgca
ttaccaaatatgttcaccaatacaagagaaacacacagtgcattgggccctgctcttcag
gctgcatttaaactgatgtctccaacgggtggtcggatctctgtgtttcaaacacagtta
ccgtctttgggagcagggcttttgcattccagagaggatcccaatcaaaggtcaagcaca
aaggtggtccagcatcttggtccagcaacagacttttataagaagttggcattggactgc
tctggccagcagactgctgtggatttatttctcttaagttcacaatattctgatctagct
tctcttgcttgcatgtccaagtattctgctggatgcatctattactacccatctttccat
cacagccataatcctgctcaggctgaaaagttgcaaaaagacctgaaaagatacctgaca
agaaagattggatttgaagcagttatgcgcataagatgtacaaaaggtctttcaatacac
actttccatgggaatttttttgtacgatctactgatttactgtcccttgccaatgtcaat
cctgatgctggatttgcagtacaaatgtccatagaggaaagtctgactgacacatcttta
gtttgttttcaaacagctcttttgtatacttccagtaaaggtgagcgtcgaattcgagtg
cacacactttgcttgcctgtagtgagttccctgactgatgtgtatgcaggagcagatgta
caagcagttgtgtgcctcttagcaaacatggctgtggatcgctcagtttcatccagcctt
gcagatgcaagagatgccttagtcaatgccgtggtggactccttgtcagcatacatgtca
actgcctcaaatctgcagcagtccatgctgatagcaccaaattccctcaagcttttccca
ctctatatcttggctcttctcaaacagaaagccttcagaacaggcacaagtacacgcttg
gatgatcgtgtctatgcaatgtgccagatgaagagccagcctcttgttcatttgatgaag
atgatacatcccaacttgtacagaatagacaagttgactgatgagagtacaatacatgta
aatgacagagttgttcctcagccacctcttcagaagttgtctgcagagaagttgacaaga
gaaggagcttttcttatggattgtggttcaattttttacctttggattggaaaaaactgt
gataacaacttcataaaagatgtccttggatacccaaattatgcgtcagtgccacagaaa
atgacacagcttcctgaggtggatgcaccttcttcagaaaggacacgatcttttatatct
tggcttagagatagtagacctttaagtccagttcttcaagtaataaaagatgagaaccct
gccaaaacagatttttttcagcatttaattgaggatcggacagaagcagctttctcgtat
tatgaattcctacttaatattcaacagcagatttgtaagtga
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