Lonchura striata (white-rumped munia): 110468014
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Entry
110468014 CDS
T05897
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X1
KO
K06824
nephronectin
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04512
ECM-receptor interaction
lsr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110468014 (NPNT)
04518 Integrin signaling
110468014 (NPNT)
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Motif
Pfam:
EGF_CA
cEGF
MAM
FXa_inhibition
EGF_3
EGF
EGF_PEAR1L
EGF_MSP1_1
EGF_DL_JAG
EGF_2
JAG1-like_EGF2
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
110468014
NCBI-ProteinID:
XP_021381185
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Position
4:24168838..24217478
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AA seq
568 aa
AA seq
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MELSLRLLLASCLSLGAAGEFDRRWPRQMVSSAGLCRFGSRIDCCWGWARVAWGQCQPFY
VLRQRIASLRCQPKAICQPGCKHGECIGPNKCKCHPGYTGKTCNQDLNECGLKPRPCKHR
CMNTYGSYKCYCLNGYMLMPDGTCSNALSCLMANCQYGCDVLKGEVRCRCPSPGLQLGPD
GRTCVDIDECATGRVLCPRFRHCVNTFGSYICRCHKGFDLMYIGGKYQCHDIDECSLGHH
QCGSFSHCYNTPGSYKCKCKEGYRDNGTNCIQRPVTRPTAHPTPGLTARPTPGPTQLAPR
TTRLTPKPTTRYVPVTTRPVTTPVVKPPPPTTPQPTTVRPTLAPQRTPLVTTEEPSHVPI
ETTSSQGVIDDNRIQPDPQKPRGDVFIPRQPGVSNNLFEILEIERGITADEFEANDDPGV
LVHSCDFDSGLCGWIKDKDDDLHWEPVRDVSGGQYLTISDPKGKEGGVAHLILPLGHLAQ
AGDLCLSFRHKVPGLHSGALQVFVRKTGAHGPAVWGRNGGHGWRQTHITLRGIGIKSVIF
RGEKGKGRTGDIGLDDVVLRRRRCSEEH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagctctccctgcggctgctcctggcgtcctgcctctcgctgggggcggccggggaa
tttgacagaaggtggcccagacaaatggtctcgtctgcaggactgtgtcggtttggaagc
agaattgactgctgctggggctgggcccgagtggcctggggacagtgccaaccattctac
gtcttaaggcagagaatagccagcctaaggtgccagcccaaagctatatgccagccaggg
tgcaaacatggtgaatgcattgggccaaataagtgtaagtgccacccaggatacactgga
aaaacttgtaaccaagatctgaatgagtgtggactaaagccgcggccgtgcaagcaccgg
tgtatgaacacctacggcagctacaagtgctactgcctgaacggctacatgctaatgcca
gacggaacgtgctcaaatgccctttcttgcctgatggcaaactgtcagtatggctgtgac
gtgctgaaaggggaggtgcgctgccgctgtccttctccagggctgcagcttgggcctgat
ggcaggacttgtgtagatattgatgaatgtgctactggaagggttctctgcccacgattt
aggcactgtgtcaataccttcgggagctatatttgcaggtgtcataaaggctttgatctg
atgtacattggaggcaaataccaatgccatgatatagatgaatgttcccttggccaccac
cagtgtggtagtttttcacattgctacaacactccaggatcctacaaatgcaaatgtaaa
gaagggtacagagacaatggaacaaactgcatacaaaggccagtgaccaggccgacagct
catccgacacctgggctgacagctcgtccgacacctgggccaactcaacttgcacccagg
acaactcgactgacacccaagccaaccacgagatacgtgccagtgacaacaaggccggtc
acgacaccagtggtgaagcctccgcctccaacaacacctcagcctacaacagtaagacct
acactagcaccacaaagaactcctctggtaacaactgaagagccttcacatgttcccatt
gaaactacatcttcccaaggagttatagatgacaacaggatccagccagatcctcagaaa
ccccgaggagatgtgttcattccacgccagcctggagtgagcaataatctgtttgaaata
cttgaaattgaaagagggattacagctgatgaatttgaagcaaacgatgacccaggtgtg
ctggtacacagctgtgattttgacagtggactgtgtggatggatcaaggacaaagatgat
gacttgcactgggaaccagtgagagatgtatcgggggggcagtaccttaccatctctgat
cccaagggcaaagaaggaggagtagcacatcttatcctgccattgggtcacctggctcag
gctggagatttgtgcctgtcctttaggcataaggtacctgggctgcattctggtgccctg
caagtctttgtaaggaaaactggtgctcatggcccagctgtttggggaagaaatggtggc
catggctggagacagacacacataacgttacgaggcataggcatcaagagtgttattttc
agaggtgagaaagggaaaggaagaactggggatattggactagatgatgtggtcttgagg
agacgacgctgctctgaagagcattag
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