KEGG   Lonchura striata (white-rumped munia): 110468014
Entry
110468014         CDS       T05897                                 
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X1
  KO
K06824  nephronectin
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04512  ECM-receptor interaction
lsr04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110468014 (NPNT)
   04518 Integrin signaling
    110468014 (NPNT)
SSDB
Motif
Pfam: EGF_CA cEGF MAM FXa_inhibition EGF_3 EGF EGF_PEAR1L EGF_MSP1_1 EGF_DL_JAG EGF_2 JAG1-like_EGF2 Plasmod_Pvs28
Other DBs
NCBI-GeneID: 110468014
NCBI-ProteinID: XP_021381185
LinkDB
Position
4:24168838..24217478
AA seq 568 aa
MELSLRLLLASCLSLGAAGEFDRRWPRQMVSSAGLCRFGSRIDCCWGWARVAWGQCQPFY
VLRQRIASLRCQPKAICQPGCKHGECIGPNKCKCHPGYTGKTCNQDLNECGLKPRPCKHR
CMNTYGSYKCYCLNGYMLMPDGTCSNALSCLMANCQYGCDVLKGEVRCRCPSPGLQLGPD
GRTCVDIDECATGRVLCPRFRHCVNTFGSYICRCHKGFDLMYIGGKYQCHDIDECSLGHH
QCGSFSHCYNTPGSYKCKCKEGYRDNGTNCIQRPVTRPTAHPTPGLTARPTPGPTQLAPR
TTRLTPKPTTRYVPVTTRPVTTPVVKPPPPTTPQPTTVRPTLAPQRTPLVTTEEPSHVPI
ETTSSQGVIDDNRIQPDPQKPRGDVFIPRQPGVSNNLFEILEIERGITADEFEANDDPGV
LVHSCDFDSGLCGWIKDKDDDLHWEPVRDVSGGQYLTISDPKGKEGGVAHLILPLGHLAQ
AGDLCLSFRHKVPGLHSGALQVFVRKTGAHGPAVWGRNGGHGWRQTHITLRGIGIKSVIF
RGEKGKGRTGDIGLDDVVLRRRRCSEEH
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggagctctccctgcggctgctcctggcgtcctgcctctcgctgggggcggccggggaa
tttgacagaaggtggcccagacaaatggtctcgtctgcaggactgtgtcggtttggaagc
agaattgactgctgctggggctgggcccgagtggcctggggacagtgccaaccattctac
gtcttaaggcagagaatagccagcctaaggtgccagcccaaagctatatgccagccaggg
tgcaaacatggtgaatgcattgggccaaataagtgtaagtgccacccaggatacactgga
aaaacttgtaaccaagatctgaatgagtgtggactaaagccgcggccgtgcaagcaccgg
tgtatgaacacctacggcagctacaagtgctactgcctgaacggctacatgctaatgcca
gacggaacgtgctcaaatgccctttcttgcctgatggcaaactgtcagtatggctgtgac
gtgctgaaaggggaggtgcgctgccgctgtccttctccagggctgcagcttgggcctgat
ggcaggacttgtgtagatattgatgaatgtgctactggaagggttctctgcccacgattt
aggcactgtgtcaataccttcgggagctatatttgcaggtgtcataaaggctttgatctg
atgtacattggaggcaaataccaatgccatgatatagatgaatgttcccttggccaccac
cagtgtggtagtttttcacattgctacaacactccaggatcctacaaatgcaaatgtaaa
gaagggtacagagacaatggaacaaactgcatacaaaggccagtgaccaggccgacagct
catccgacacctgggctgacagctcgtccgacacctgggccaactcaacttgcacccagg
acaactcgactgacacccaagccaaccacgagatacgtgccagtgacaacaaggccggtc
acgacaccagtggtgaagcctccgcctccaacaacacctcagcctacaacagtaagacct
acactagcaccacaaagaactcctctggtaacaactgaagagccttcacatgttcccatt
gaaactacatcttcccaaggagttatagatgacaacaggatccagccagatcctcagaaa
ccccgaggagatgtgttcattccacgccagcctggagtgagcaataatctgtttgaaata
cttgaaattgaaagagggattacagctgatgaatttgaagcaaacgatgacccaggtgtg
ctggtacacagctgtgattttgacagtggactgtgtggatggatcaaggacaaagatgat
gacttgcactgggaaccagtgagagatgtatcgggggggcagtaccttaccatctctgat
cccaagggcaaagaaggaggagtagcacatcttatcctgccattgggtcacctggctcag
gctggagatttgtgcctgtcctttaggcataaggtacctgggctgcattctggtgccctg
caagtctttgtaaggaaaactggtgctcatggcccagctgtttggggaagaaatggtggc
catggctggagacagacacacataacgttacgaggcataggcatcaagagtgttattttc
agaggtgagaaagggaaaggaagaactggggatattggactagatgatgtggtcttgagg
agacgacgctgctctgaagagcattag

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