Lonchura striata (white-rumped munia): 110468059
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Entry
110468059 CDS
T05897
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110468059 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110468059 (ABCC8)
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
110468059 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
RsgA_GTPase
AAA_23
MMR_HSR1
nSTAND1
AAA_25
TMD0_ABC
TraD_N
DEAD
AAA_15
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
110468059
NCBI-ProteinID:
XP_021381295
LinkDB
All DBs
Position
5:48785050..48859157
Genome browser
AA seq
1601 aa
AA seq
DB search
MCAEAEAAPGCAQGPAMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITF
PILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHL
HLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGF
SQLRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKTPKEVKPPEDLQDLGVRFLQPFVNL
LSKGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKFNSDQNKRSS
TPQGSRSIWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTK
ILGVFFISSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKI
MQLSTSNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGIS
ALIGAAVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFH
SSVEETRQKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFAS
LSLFHILVSPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKSSELRSADNHSKYQ
AVPLKVVNRKRPAREDWNNYSSHMRRPINITEADDFCVKITNGFFTWTPEGPPALSNIDI
RIPQGQLTMIVGQVGCGKSSLLLAILGEMQKISGNISWTSCTSDSETGEDFSPEKECPVD
MEVRKRGAVAYASQKPWLLNATVEENITFESSFNKQRYKAVIDACSLQPDIDILPHGDQT
QIGERGINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDK
RTIVLVTHKLQYLPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEK
ETTIEENPVLERTNLRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRAC
GKYLSAAGILLLPLLLLSQLLKHTVMVAIDYCLALWTEHAISIKIEPETKNCSQCMEFDH
SPYSKVFSILCCLGIVLCLVTSIAVEWTGLKVTKKLHSSLLNKIILAPMRFFETTPLGSI
LNRFSADCNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALLPLAIMCYFIQKY
FRVASRDLQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFL
TAANRWLEVRMEYIGACVVLIAAVTSITSCLYNKITSGLVGLGLTYALMVSNYLNWMVRN
LADMEIQLGAVKRINGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPV
LKHVNAHISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSR
LSIILQDPILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGEN
FSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVH
TILNSDLVIVMKRGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggaggcggaggcggcgcccggctgcgcgcagggtcccgccatggccctggcg
ttctgcggcgacgagggcaactccaccgcctacaacgtggaccacggcgtgctcaacaac
ggctgcttcgtggatgcgctcaacgtggtgccgcacgtcttcttgctcttcatcaccttc
cccatcctcttcatcggatgggggagtcagagttccaaagtacatatacatcatagcaca
tggcttcattttcctggccacaatttacgctggatactgacttttatccttttgtttgtg
ctggtgtgtgaaattgcagagggcatagtgtctgatggggtttctgaatcccgccacttg
cacctgtacatgccggcgggaatggcattcctggcagccatcacatcagttgtctattac
cacaatattgaaacatccaatttccccaagctgttaatagcattgctgttctactggact
ttagctttcataactaaaaccatcaaatttgtgaagttctgtgataatggggttggattt
tctcagcttcgattttgcctcacaggactcttggttgtcctttatggaatgctattagct
gtagaaatcaatgtcatcagggtgaggaggtatgttttcttcaaaactcctaaagaagtt
aaacctcctgaggacctccaggatcttggtgtccgattcttgcagccctttgtgaatctg
ttatccaaaggaacatactggtggatgaacaccttcatcaagactgcccataaaaagcca
atagacttgaaaaccataggcaagcttcccattgctatgagagctctgaccaattacatt
cgccttaacgaggcctttgaagcacagaagtttaattctgaccagaataaaagatcatcg
actccccaaggctccagatccatttggcgtgctctctgctgtgcttttggaagaccctta
cttctcagcagcacattccgtatcctggctgacttgcttggatttgccgggccgctctgc
atctctgggattgttcacaacgttggcaaaggaaataacaccatccgcccacagactaaa
attctaggtgttttctttatttcatcacaagagttcctgtccaatgcttatgttttggct
gtacttctattttttgccctcctgttgcaaaggacatttctgcaagcatcatactatgtt
gctattgaaacaggaatcaacttgagaggtgcaatacagacaaaaatatacaataaaatt
atgcagctttcaacttctaacatgtctatgggggagatgacagcaggccagatctgtaac
ctggttgccatagacacaaatcagctgatgtggttcttcttcctctgccctaacctttgg
gctatgccagtacagataattgtaggagttcttctgctctactaccttcttggaatcagt
gccttaattggagcagcagtaatcatagtccttgcacctgttcagtactttgtagccaca
aaactctcacaggcccagcgaagcacattggagtactccaacgagagactgaagaagaca
aatgagatgctgcggggcattaagctcctgaaactctatgcttgggagcacatatttcac
agcagcgtggaggaaaccagacagaaagaaatgactagcctcaagtcttttgccctttac
acctccatatccatctttatgaatgcagcaataccaattgcagctgtgcttataacattt
gttgtccatgctcatctgacaagaaaggctgacttctccccatcagtggcatttgcctcc
ctctccctgtttcatatccttgtgtctccgttgttcctgctctcaagtgtggttagatcc
actgtcaaagcattagtaagtgtgcagaaattgagtgaattcctgtcaagtgaagaaatt
ggagaagagcatgataaatcttcagagctaagaagtgcagataatcacagcaagtaccaa
gcagtaccactcaaggttgtgaaccgcaagaggcctgccagggaggactggaacaattac
agctctcacatgagaagacccattaacatcacagaagcagatgatttttgtgtaaagatc
acaaatggattttttacttggacacctgaaggtcctccagcattatctaatattgatatc
cgaatccctcaaggccagctaacaatgattgtaggacaggtgggctgtggtaagtcatct
ctcttgctggccatacttggtgagatgcagaagatctctgggaacatatcctggaccagc
tgcacttctgacagtgagacgggggaagatttcagcccagagaaagaatgtcctgttgac
atggaagtcaggaaaagaggtgcagtggcttatgcatcccagaagccttggctgctcaat
gccacagtggaagagaatatcacgtttgaaagctcttttaacaaacagaggtacaaagca
gtaattgatgcttgttccctccagcctgatattgacattctgcctcatggagaccaaacc
cagattggagagaggggtattaatctgtctggagggcagcgccagcggatcagtgtggca
cgagcactttaccagcagacaaatgttgtgtttctggatgatcctttttctgccctggat
atccacctgagtgaccatctcatgcaagaagggatcctgaagatgctgcgggaggacaag
aggaccattgtgctggtgactcacaagctgcagtacttgccccacgctgactggataatt
gcaatgaaagatggtaacatccagagagaaggaacactcaaggacattcagaaatcagag
actgagctctttgaacactggaagacattaatgaatcgacaagaccaagagctggagaag
gaaacaactattgaggaaaaccctgttttggaaagaacgaatctccggaggacgatgtat
tcccgggaagcattactgaaagatgatgaagaggatgaagaagaagtaacagagagtgat
gatgaagacaacctgtcttcagtgctgcatcagagagccaagatgccctggagagcctgt
ggcaagtacctgagtgcagcagggatcctcctgctgcccctgctgctcctgtcccagctg
ctgaagcacacagtgatggtggccatcgactactgcctggccctttggactgagcatgcc
atttctatcaagatcgagcccgagacaaaaaactgctcccagtgcatggaatttgaccat
tctccatattcaaaggttttcagcattctttgctgccttggaattgtattatgccttgtc
acatcaatagcagtggagtggactggcttgaaagtcaccaaaaagctacactcttcttta
ctaaataaaattattttggctccaatgaggttttttgaaacaacacctctgggaagtata
ttaaacagattttcagctgactgcaataccattgaccagcacatcccagctaccctggag
tgcttgagccgttccaccttgctgtgtgtgtctgcccttgctgtgatctcctacgtcacg
cccatgttcctcattgccctgctgcccctggcaatcatgtgctacttcatccagaagtat
ttccgagtggcctcccgggacctgcagcagctggatgacagcactcagctaccattactc
tcccatttttcagagactgttgaaggtcttaccaccatccgagccttcaggtatgaagcc
aaattccgacaaaaacttcttgaatacacggattccaacaacattgcttcccttttcctc
acagcagccaatcgctggctggaagttcgcatggagtacattggagcatgtgtggtactc
atagcagctgtcacttctattaccagttgcctgtataataaaatcacttcaggacttgta
ggcttgggactaacctatgctcttatggtgtccaactatctgaattggatggttcgtaac
ctggctgacatggagatccagctgggggcagtgaaaagaatcaatggccttctcaaaaca
gaagctgaaaattacgaagggctcctttcttcctcacagattccccagaactggccagac
agaggggagatccaaatccagaacctcagtgttcgatatgacagcaacctgaagccagtg
ctaaaacatgtcaatgcccacatctcaccaggacaaaagattgggatctgcggccgaaca
ggcagtggaaaatcctccttctctcttgcatttttcagaatggttgacacctttgagggg
aggattatcattgatggtatagatattgcaaagctgcccttacagacactgagatccagg
ctgtcaatcatcctccaagatcctattttattcagtggaacaatccggtttaacttggac
cctgagaagaagtgcactgacagcatgctctgggaagcactggaaatagcacagctcaag
catgtggtgaaggcactacctgggggcctagatgcaatagtcacggaagggggtgaaaac
ttcagccagggccaaagacagctgttctgcctggcaagagcttttgtgaggaagacgagc
atcttcatcatggatgaagccacagcatctattgacatggcaacagagaacattctccag
aaggtggtcatgactgcgtttgctgaccggactgtggttacaatagcacaccgtgtgcac
acgatcctcaattcagatttggttattgtaatgaagagaggggttattttggaatatgac
aagcctgaggttctgctagaacaagaagacagtgtctttgcttcttttgtacaagcagat
aagtaa
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integrated database retrieval system
