KEGG   Lonchura striata (white-rumped munia): 110468108
Entry
110468108         CDS       T05897                                 
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110468108 (ZC3H12C)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110468108 (ZC3H12C)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 UBA_N4BP1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 110468108
NCBI-ProteinID: XP_021381375
UniProt: A0A218UTN1
LinkDB
Position
1:45171624..45209841
AA seq 857 aa
MGLKDHLGHDLGHLYVGSTGTEINAIVPWSMAEKPTMDKVNSRKEDREKETSEETSGSSS
CDSEESTNSDNESERLNNSASESHLLPKTHRQLCRSLCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVTNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSDGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSMSGPRSPERRFSLDTDYRISSVASDC
SSEGSISCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNAQPFLQSYHEPLAR
VQSYSHEEPKHHHKSPIPYMAVHLQHPAVGARSSCPNDYSAPQSSSHSKTLHLGRALVST
RIDSISDSRLYENSPLRHRKPYSGQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQPWRIPYCGIPQDPPRLQDTREKVYVNLCNIFPPDLVRMVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acagagataaatgcaattgtaccttggtcgatggcggagaagccaacaatggataaggtt
aattctaggaaagaagacagagaaaaggagacatctgaagagacttctggaagctccagc
tgtgactctgaagaaagcacaaattctgataatgagtcagagagactgaataattctgca
tcggagtcacatttattgcctaagactcatcgacagctgtgccgatctctttgcttagag
cctcatatactaaaaagaaatgaaatcttgcaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaactaatgctaacactagtgtaatgcgtgaagcgtcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccatgggaacaaagaagtattttct
tgtcgaggaatcaaactggcagtagattggtttttggagagaggccacaaggatgttact
gtgtttgtgccagcatggaggaaagaacagtcaagaccagatgcacttataacagatcaa
gaaatcttacgaaaattggaaaaggagaagattctcgtgttcacaccatcccggcgcgtg
caagggagaagggtggtgtgctatgatgaccgattcatagtgaagttggcctttgaatca
gatggcatcattgtctctaatgataactacagggatctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcatttgttaatgacaaatttatgcct
cctgatgatcctcttggccgccatggtccaagtctggacaatttccttaggaagaagcct
attgtgccagagcataagaagcaaccatgtccatatgggaagaaatgtacctatggacac
aaatgcaaatactaccatccagaaagaggaaatcagcctcagcgatctgtagctgatgaa
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagcgttccctgtagcactaaaagtgatggcacttcagagctgaagcgtgctgct
ccaaagaggcaatcggatcctagtataaggactcaagtctaccaagacttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagtataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaactaacggccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgaatctccggtggat
gtaggctattactctatgctgagtgcatattcaaacctcagcatgtctggaccacgtagt
cctgagaggcgcttctccttggacacagattatcggattagctctgtagcctccgactgc
agcagcgaggggagcatcagctgtggcagcagcgattcctacgtgggttacagcgaccgc
tcttacatgagttcacctgacccacagctggaggagaacttgaagtgccagcacatgcac
ccccacggccgccttaacgctcagcccttcctgcagagctaccacgagcccctcgctcga
gtgcagagctatagtcacgaagaaccaaagcatcaccacaaatctcccattccgtatatg
gctgtgcatctgcagcatccagcagtcggtgctcgttccagctgtccgaacgactactct
gcacctcagagctcatctcattcgaagaccctgcatctggggagagccttggtgtccaca
agaatagacagcatttcagactcgcgtttgtatgaaaactctccgttaagacacaggaag
ccttactctggccaggaagggctgggaggttgggataggcagagttacgggatggatgcc
tacggctaccgccagacgtactccttgcccagcaaccccacgcagccatgctacgagcag
tttgccttccaaagccttcccgagcagcaggaccagccctggcgcataccttactgtgga
atcccgcaagaccccccaaggctccaagacacccgggagaaggtttacgttaacctctgc
aacatcttcccccccgatctcgtgaggatggtgatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgctgccatcttagtggagaaatctcagctaggttattga

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