Lonchura striata (white-rumped munia): 110468108
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Entry
110468108 CDS
T05897
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110468108 (ZC3H12C)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110468108 (ZC3H12C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
110468108
NCBI-ProteinID:
XP_021381375
UniProt:
A0A218UTN1
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Position
1:45171624..45209841
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AA seq
857 aa
AA seq
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MGLKDHLGHDLGHLYVGSTGTEINAIVPWSMAEKPTMDKVNSRKEDREKETSEETSGSSS
CDSEESTNSDNESERLNNSASESHLLPKTHRQLCRSLCLEPHILKRNEILQDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVTNANTSVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKSDGTSELKRAAPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAGKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSMSGPRSPERRFSLDTDYRISSVASDC
SSEGSISCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNAQPFLQSYHEPLAR
VQSYSHEEPKHHHKSPIPYMAVHLQHPAVGARSSCPNDYSAPQSSSHSKTLHLGRALVST
RIDSISDSRLYENSPLRHRKPYSGQEGLGGWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQPWRIPYCGIPQDPPRLQDTREKVYVNLCNIFPPDLVRMVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acagagataaatgcaattgtaccttggtcgatggcggagaagccaacaatggataaggtt
aattctaggaaagaagacagagaaaaggagacatctgaagagacttctggaagctccagc
tgtgactctgaagaaagcacaaattctgataatgagtcagagagactgaataattctgca
tcggagtcacatttattgcctaagactcatcgacagctgtgccgatctctttgcttagag
cctcatatactaaaaagaaatgaaatcttgcaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagcctcctgatgtggtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaactaatgctaacactagtgtaatgcgtgaagcgtcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacagaggatggagacaacctgagg
ccaatagttattgatggcagcaatgttgcaatgagccatgggaacaaagaagtattttct
tgtcgaggaatcaaactggcagtagattggtttttggagagaggccacaaggatgttact
gtgtttgtgccagcatggaggaaagaacagtcaagaccagatgcacttataacagatcaa
gaaatcttacgaaaattggaaaaggagaagattctcgtgttcacaccatcccggcgcgtg
caagggagaagggtggtgtgctatgatgaccgattcatagtgaagttggcctttgaatca
gatggcatcattgtctctaatgataactacagggatctagctaatgaaaagccagaatgg
aagaagttcatagatgaacgcttgttgatgtattcatttgttaatgacaaatttatgcct
cctgatgatcctcttggccgccatggtccaagtctggacaatttccttaggaagaagcct
attgtgccagagcataagaagcaaccatgtccatatgggaagaaatgtacctatggacac
aaatgcaaatactaccatccagaaagaggaaatcagcctcagcgatctgtagctgatgaa
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagcgttccctgtagcactaaaagtgatggcacttcagagctgaagcgtgctgct
ccaaagaggcaatcggatcctagtataaggactcaagtctaccaagacttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagtataccaagt
tcctctgctggaaaaccccaaagtactgcacctttaactaacggccttccatccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcatggaacaccaatgccttatgaccagtatccaaaatgtgaatctccggtggat
gtaggctattactctatgctgagtgcatattcaaacctcagcatgtctggaccacgtagt
cctgagaggcgcttctccttggacacagattatcggattagctctgtagcctccgactgc
agcagcgaggggagcatcagctgtggcagcagcgattcctacgtgggttacagcgaccgc
tcttacatgagttcacctgacccacagctggaggagaacttgaagtgccagcacatgcac
ccccacggccgccttaacgctcagcccttcctgcagagctaccacgagcccctcgctcga
gtgcagagctatagtcacgaagaaccaaagcatcaccacaaatctcccattccgtatatg
gctgtgcatctgcagcatccagcagtcggtgctcgttccagctgtccgaacgactactct
gcacctcagagctcatctcattcgaagaccctgcatctggggagagccttggtgtccaca
agaatagacagcatttcagactcgcgtttgtatgaaaactctccgttaagacacaggaag
ccttactctggccaggaagggctgggaggttgggataggcagagttacgggatggatgcc
tacggctaccgccagacgtactccttgcccagcaaccccacgcagccatgctacgagcag
tttgccttccaaagccttcccgagcagcaggaccagccctggcgcataccttactgtgga
atcccgcaagaccccccaaggctccaagacacccgggagaaggtttacgttaacctctgc
aacatcttcccccccgatctcgtgaggatggtgatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgctgccatcttagtggagaaatctcagctaggttattga
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