Lonchura striata (white-rumped munia): 110468117
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Entry
110468117 CDS
T05897
Symbol
RNF17
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110468117 (RNF17)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110468117 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
YscO-like
Motif
Other DBs
NCBI-GeneID:
110468117
NCBI-ProteinID:
XP_031362314
LinkDB
All DBs
Position
1:45525450..45561086
Genome browser
AA seq
1452 aa
AA seq
DB search
MSGRGEFSLLDDSNRELPRGRMKGVRQCPKLLEENFAKPHQRNGNLRHMSKALSAEVLHG
DGKDEDTGLFCFSSPEENNTGQDIDEALSIAVSNLGHFQDASKVLEYLELKVKHKKDKVT
EAADRTLDELITLLSRKRKSFAELKNSINNYSSSIAKTKEVIEEKKQRLIDAIRTAKELK
SSHSLRNCYDLAQIIYDLKLPVEAELSRVKNLKDNILSRLFMNTSEITSSLENLGEIKQG
MTTNEDNGQDTLILDGQEETPDVIIEEVLEDDLEGLTELVLVSHVINPCHFYIRRYSQKK
EAFALQMKLENFCCSKSSYLLPSDILELGARTFIKSEEIGMWCRGTITELIPVESKSRGK
KPCGRIRYKVCDVALLEVFLIDFGSSVVLIFSGCGPTERPDPATLQTIETHDICLFVRKP
DEHIEAELAAIPPLAVRCSLKDVVPKNEDEGWGEEAKTKFLEMVNNKVVSMMVFREDNGV
LIVDLRKPPFNEVSSNTPLSLKDALVFLDLARFKLQLPRQLENCTISQYSPPNIPQEGEE
VFVVVCHINSPSDFYLRLRESVESLALSEKIQEIYKQENGKNLEIFNPVEGQACVAKQED
GNWYRAQIIGLPSCQEVLVKYVDYGNIANISHKDIRRVKQEFLSFPEKAIRCRLACIEPF
KGAHEWKREAKERFEEMTEDKLMLCSVIEILDNNILSIELFNASADNGKKFSINCQLVEE
DLASYVPRYTERTEVKPNEIWDDPLEEISKTSEAFIPIDMESVDEDFRSLCNKELHGRIS
YVVSPSKIFIQLLASESILKSLQEEMASIYKESQPQSVKWEREMHCAVYVHDVEQWQRGQ
IRRIVSETSAEVLLYDSGAEKTVEISCLRKLEENMKTIRTLAIECSLTEIRPTGGSTEWT
ATVCECLSYYLTGAQVKIVIQKNDVGGALPVKILCKDETGKVTDTSEYLIEQGLALRNRR
TGKADRASMVSKEHLEVHFEQENTQLDGCNSKIASARNRTVPEENATISESEQKSLKIHE
PLPHSEMDEVYKSPIVPEAKIFQAVVSCIGGDGTIYIIPKLFETALNKLMAEIQNAFKGL
GLLIPYCWKKGEACVVRGSDTAWYRAKIVEVSGSTLLVQYVDHGYIESIPQCHLYPTTFY
TGIPPFCIPCQLYKTLPIGNFWPQEAVEYLQELLKNEEVEIHVKELPDNPWGKLSISLYF
GGMSLSSFMAYQRYCVAEDCQNIEKQGDFEGNLLPSYLLQPLPVPGETFPVTVSHLVSPK
EVYIRLDYSENLTKSSATERSACCDSESLSKALKWCNKIVKTLPHLTNFKKELPCLAEYV
DGLWYRAKLLSITQLVPVQILVQFVDYGTYLVAPISRLRRIPCHLLKYPVQAVRVLLAGF
RPASDDKNVERIPYSPEWSLKALWTMVDCVEGKHLFASILTVSPEVTISLYGDDKNLVHL
KLIEMGLAELDQ
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaggggagagttctccttgttggatgatagtaatagagagcttcccagaggc
agaatgaaaggtgtgaggcaatgtcctaagctactagaagaaaattttgcaaagccacat
cagagaaatggcaatttgcgtcatatgtcaaaagctctcagtgcggaagtgttgcatggt
gatgggaaggatgaagacactggtttgttttgtttctcttctccagaagaaaacaacact
gggcaagatattgatgaagctttgagcatagctgttagtaatcttggccacttccaagat
gcaagcaaggtgctggaatacttggagttgaaagtaaagcataaaaaagacaaagttaca
gaagctgcagatagaacacttgatgaacttattactcttctgtcaaggaaaaggaaatca
tttgcagaattgaagaacagcatcaacaactacagttctagtattgcaaaaactaaggaa
gtcatcgaagagaagaagcagcgcttgattgatgccattaggacggcaaaggaattaaaa
tcttcacattctctaagaaattgctatgatcttgctcagattatttatgacttgaagctg
ccagtggaggctgagctctcaagagtgaagaacttaaaggacaatatactttcaaggttg
ttcatgaacacttccgaaattacatcttcattagaaaatttgggcgagattaaacaggga
atgacaacaaatgaagataatggacaagacactcttatccttgatggccaggaagaaaca
cctgatgtcataatagaagaagtacttgaagatgacttggaaggtttgacagaattggtg
ttggtaagccatgttataaatccatgccatttctatattcggagatattcacagaagaaa
gaagcatttgctttacagatgaaattggaaaacttctgctgtagtaagagttcctatctc
ttgccttcagacattttggaactaggtgctagaactttcattaagagtgaggaaattggc
atgtggtgccgtggaaccatcactgaactaattcctgtagaaagtaaaagtagggggaag
aagccatgtggtcgaataagatacaaagtgtgtgatgttgcactgctggaagtattcctg
attgattttggaagctctgtagttctgattttctcaggatgtggtcccactgaaaggcca
gatcctgctactctgcaaactattgaaacccatgacatttgtctgtttgtgaggaagcct
gatgagcacattgaggcagagcttgcagccattcctcctttagcagtacggtgttcactg
aaggatgttgttcccaaaaatgaagatgaaggttggggagaggaggcaaagacaaaattt
ttagaaatggtaaataataaagttgtttcaatgatggtgtttagagaagacaatggtgtt
ctcattgtggatctgagaaaacctccatttaatgaagtaagcagtaatacaccactgtct
ctcaaggatgcattggttttcttagatttggcaaggtttaaattacaacttcctaggcag
ttggaaaattgcaccatctcacagtacagtccaccaaatattccacaggaaggagaagaa
gtctttgttgtggtttgtcacattaacagtccaagtgatttctatcttcgcttgagagag
agtgtggaatctttagctctttcagagaaaattcaggagatatataaacaagagaatggc
aaaaaccttgaaattttcaacccagttgaaggccaagcatgtgtcgcaaagcaggaggat
gggaattggtacagagcacagattatagggctgccaagttgtcaagaagttctggtaaag
tacgttgactacggcaacattgctaacatatctcataaagacatacgcagagtgaaacag
gagtttctgagctttccagaaaaggcaatcaggtgtaggctggcttgcattgagccattc
aaaggggcacatgagtggaagagagaagccaaggaaagatttgaagaaatgactgaagat
aaacttatgctgtgctcagttattgaaattttagataataacatcttatctattgaactc
ttcaatgcctctgctgataatgggaaaaaatttagtattaactgtcagctagttgaggaa
gacttagcatcctacgtacctagatacactgaaagaactgaagtaaagcctaatgaaata
tgggatgatcctctagaagaaatttctaaaacctcagaagcttttattcctatagacatg
gaatctgtggatgaagatttcagatcactttgtaacaaggagttacatgggagaattagt
tatgttgtatctcctagcaaaatttttatacagttgctggcatcagaaagtatactgaaa
agtttacaggaggagatggcttccatctacaaagaatcccagccacagtctgtaaagtgg
gagagggaaatgcactgtgctgtttacgtacacgatgtggaacagtggcagagaggtcag
atccgcaggattgtctctgaaacaagtgcagaggttctactttatgattctggagctgaa
aaaacagtggagatcagctgtctaagaaaacttgaggaaaacatgaagaccatcaggaca
ttagcaatagaatgttcactgacagaaataagacccacaggtggaagcacagagtggaca
gcaacagtgtgtgaatgcttgtcctattacctaactggagcacaagtgaaaatagttata
cagaaaaatgatgtgggtggtgccttacctgtgaaaattctttgcaaagatgaaacagga
aaagtgactgatacttctgaatatcttattgaacagggtttggctcttagaaaccgaaga
actggtaaagctgatagggcttctatggtctccaaggaacatcttgaagtacattttgag
caggagaacacacagctggatggttgtaattccaaaattgcatctgcaagaaacaggact
gttccagaggaaaatgccactatttcagagagtgaacaaaaatcactcaaaattcatgaa
ccactgcctcattcagaaatggatgaagtatataaatctcccattgttcctgaagcaaaa
attttccaggctgtagtgagttgtattggaggggatggaactatttatataataccaaaa
ttatttgaaactgctctaaacaaattgatggctgaaatacaaaatgcattcaaaggcctt
ggtctcctgattccctactgctggaagaagggagaagcctgtgttgtaagaggatcagat
actgcatggtatcgagctaaaattgtagaagtcagcggcagtactctcctggtccagtat
gtagatcatggttacatagagagcattcctcagtgtcacctgtatccaactacattttac
actggcattcctccgttttgcatcccatgtcagctctacaagactctgcccattggaaat
ttttggccacaggaggcagtagaataccttcaagaacttctcaaaaatgaagaagttgaa
attcatgttaaggagttaccagataacccgtggggcaagttgtccatcagcctctatttt
ggtgggatgtcgctttcgtccttcatggcataccagaggtactgtgttgctgaagattgc
cagaacatagaaaagcagggggactttgaaggaaaccttttgccttcgtacctgctgcaa
ccactgcctgttccaggagaaacctttcctgtcacagtttcccacttggtgtcccccaag
gaggtttatattcgtctcgattactcagagaaccttacaaagagctctgccacagagaga
tctgcctgctgtgactcagagagccttagtaaagccctgaagtggtgcaataaaattgta
aagacacttcctcacctaacaaacttcaaaaaagagctgccttgccttgcagagtatgtg
gatggtttatggtatagagcaaagctcctctctattacacagcttgtccctgttcagatt
ctggttcagtttgttgactatggtacttacttagttgccccaataagcagattgcgtcgc
ataccttgtcatcttctgaagtatccagttcaagcagtacgagttctgttggctggattt
agacctgcttcagatgacaaaaatgtggaaagaattccttattccccagaatggagcctg
aaagctttgtggaccatggtggactgtgttgaaggaaagcatctctttgcttccatactt
actgtttcaccagaggttaccatttctttgtatggagatgacaaaaatctggttcatctg
aagctgatagaaatgggtcttgcagagttggatcagtga
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