Lonchura striata (white-rumped munia): 110468135
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Entry
110468135 CDS
T05897
Name
(RefSeq) desmoglein-2
KO
K07597
desmoglein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110468135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110468135
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Major cadherins
110468135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
CADH_Y-type_LIR
RibLong
Motif
Other DBs
NCBI-GeneID:
110468135
NCBI-ProteinID:
XP_021381415
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Position
2:108180267..108202372
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AA seq
1124 aa
AA seq
DB search
MSRGPVAAVRLLALLICLNYGHGLYVKVYHQNDRSGLLSHPSSLVRQKREWTVPPAFIRE
EEDNSYKNPIARIHSDLEDTGIVVTYTISGQGVTEPPYGLFVINGKTGDLNITGRVDREK
TPMLLVRGHALDKNGAKLEEPIDLPIKVVDINDNFPVFSHEVFVGSIEELSETGTIVMRI
NATDADEPNNLNSKIAFRIVSQSPSTPFIIDKNTGEVRVAKINLDRETQSSYSLVVEAKD
RGGEKDGNAATCSLEIKILDVNDNLPVVESRTFEASIEENRANVEILRIKVFDKDEEFSD
NWLANFTFVSGNEGGFFKIVTDTQTNEGILTVVKELDYEKMQSLNLGIVVTNKAEFHKSI
KASYKAETIPIKIKVINVKEGPVFPGGTKIIEASEKTQIKQVIGQYQAYDEDTGKIAEHI
TYMKGKDAANWITVDSVTGEILLAKNLDYESPYVKNGTYTITMLGVTTDSPRKTITGTVV
IQVKDENDNCPVIVNPVRTVCSDAKLVDVTAYDLDGYPNSYPFSFTVIDEPEGTAAKWII
ASGNDTSIQLVPQNLKPGRTEVPLLIKDFQGVSCALPQSLQLTVCECADNGVCQEKFVAS
KSVGLAPAAVALIILAFLLLLLVPLLLLLCPGGLGAKGFAGTKTFTDIPDHSEAMLRQWN
SEGAAPQEKPVLSFIPPTALGDLKGGTAAAAAGAAGGGMSGEEALIGAGSSVSHVGEHHN
TITRERWEEQRHLLSAADCGAMAAGAAEGMAGVDGKTVVSGGGAAVGVAGAMNEGFLRDY
FNDKAVSFADEDEEQAAKDCLLVYSQGESGSPHGSVGCCSFIEGDFDDHFLDDLGDKFKT
LAEICIGRQINMKEGGYKNESGFGLSEAKSQFLHQQNTSTSGQAFASGSGFQSIPPVHAG
SGTGESSLSKEVVTETTFSSSHPGQHNARHLPTGHTESHVTVTETSYSVGAPACSAPVFL
DPQFKENVVVTERVLAPASSIQGMVKIPDLPHGSNVVVTERMVKSACAGPGSLAVQDLPD
SQYVVVRERERVLVPAAEQGSLSFPASTQECSTVLNERVVTASGLQGRAEQATGASSGRQ
EHALSTDSPLNLMGSDLQGSPPASATLSKSSRVTKYSTVQYTRS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggccccgtggcggcggtgcggctgctggcgctgctgatctgtttgaattat
ggacatgggctctatgtgaaggtttatcatcaaaatgacaggagtggcctgctgtctcat
cccagcagcctagtcagacagaagcgagaatggacagtccctccagctttcatacgggag
gaagaagacaattcctataagaatccaattgctagaatacattcagatcttgaagataca
ggaattgtagtaacttacactatatctggtcaaggagtaacagaacccccatatggatta
tttgttatcaatggaaagactggtgacctgaacataacaggaagggtggacagagaaaag
actccaatgcttcttgtccgaggccatgcactagataaaaatggggcaaaactggaagag
ccaatagacctcccaattaaagttgtagacataaatgacaattttccagtgttttcacat
gaagtttttgttggttcaattgaagaattaagtgaaacaggtacaattgtaatgaggata
aatgcaacagatgcagatgaaccaaataacctaaattccaaaattgctttcaggattgtt
tcccaaagccctagcactccattcatcatagataagaatactggcgaagttcgagtagca
aaaataaaccttgacagagagacacaaagtagctactctttggtggtggaagcaaaggac
cgtggtggtgaaaaagacgggaatgctgcaacatgttctttagaaatcaagattctggat
gtcaatgacaatctgcctgttgttgaaagtcgtacatttgaagcaagcattgaagaaaac
agagcaaatgtggaaattttgagaataaaagtatttgacaaagatgaagagttttctgat
aattggctggcaaactttacatttgtttctggcaatgaaggtggttttttcaaaattgtg
acagatacccaaacaaatgaaggaattttgactgttgtgaaggagctggattatgaaaaa
atgcaaagtctaaacttaggcattgttgttacaaacaaagcagagttccacaagtcgatt
aaagccagttacaaagcagaaacaattccaatcaaaattaaggtgatcaatgtgaaggaa
ggccctgtgtttcctggtggcacaaaaattattgaagcaagtgagaaaacgcagataaaa
caggttattggacagtatcaagcttatgatgaagacactggaaaaatagcagagcacatt
acatacatgaaaggaaaagatgcagcaaactggatcactgtagactcagtcacaggtgaa
atcctacttgctaaaaatcttgattatgaatcaccttatgtaaaaaatggtacctacact
atcaccatgttgggtgtaactactgattccccaaggaaaacaatcactggcacagtcgtc
attcaagttaaagatgagaatgataactgcccagttattgtgaaccctgtgcggactgtg
tgttcagatgcaaaattagttgatgttacagcttatgatttggatggttacccgaacagt
tatcccttcagctttactgtcattgatgagccagaagggacagcagcaaaatggataatt
gcatctggaaatgacaccagcatacagctggtaccacaaaacctgaagccaggcagaact
gaagttcccttactaataaaggatttccaaggggtcagctgtgctctgccacagtctctg
cagctgactgtttgtgagtgtgcagataatggcgtgtgccaggagaagtttgttgcctcg
aagtcagtgggtctggcaccagcagcggttgcactaatcatcttggcatttttacttttg
ctgctcgttccactgttactgctgctgtgtccaggtggcttgggagcaaagggatttgct
ggaacaaagacgtttacggacataccagaccacagtgaagcgatgttgcgtcagtggaac
agtgaaggagcagctcctcaggagaagccagtgctaagcttcattccacccactgcactt
ggggacttgaaaggaggaacagcagcagcagcagcaggagcagcaggaggaggaatgagt
ggagaagaagctctaataggagcaggcagctctgtctctcacgtaggagagcatcacaac
actattaccagggaaagatgggaagagcaaaggcatcttctttctgctgccgactgtgga
gccatggcagctggagcagctgaaggcatggcaggtgtagacggcaagacagtcgtgtcg
ggaggaggagctgctgtgggagtggctggagccatgaatgaaggattcttaagagactac
ttcaacgataaagctgtctcttttgcggatgaagatgaggagcaagctgcaaaagactgt
ctcctggtttattcccagggagaatcaggctcccctcatggctccgttggctgctgcagc
tttattgagggggattttgatgaccattttcttgatgatttaggagacaagtttaagact
ctagcagaaatatgtataggtaggcagatcaacatgaaagagggtggctacaagaatgaa
tcaggttttggtcttagtgaagcaaagtcacagttcttacaccagcaaaatacttccacc
tctggacaagcttttgcctcaggcagtggtttccagtccatcccacccgtgcacgcaggc
agtggcacaggagaaagcagcctgtccaaggaggtggtgacagaaacaaccttttcatca
tcccatcctgggcagcacaatgcccggcacctccccacaggccacacagagagccatgtc
accgtgacggaaacatcctattctgtgggggctcctgcctgctcggcccctgtcttttta
gacccccagtttaaggagaacgtagtggtgacagagagagtgctggcacctgcatcgagc
attcaggggatggtgaaaatccctgatttgccgcatggaagtaacgtggtggttacagaa
aggatggtgaagtcagcgtgtgcagggccaggatccctggcagttcaggatcttcctgac
tcgcagtatgtcgtggtgagggagcgagagagggttcttgtgcctgctgcagagcagggc
tcgctcagcttccctgcttcgacacaggaatgcagcacagtgctgaatgaaagggtggtg
acagcctcagggctgcagggcagagctgaacaggcaacaggtgccagctcaggaaggcaa
gagcatgctctgagcacagactccccacttaacttgatgggctctgacttacaagggtca
cctcctgccagtgccacactgagcaagtcttccagggtcaccaaatacagcacagtgcag
tacactcgctcatag
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