Lonchura striata (white-rumped munia): 110468160
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Entry
110468160 CDS
T05897
Symbol
DDX25
Name
(RefSeq) ATP-dependent RNA helicase DDX25
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110468160 (DDX25)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110468160 (DDX25)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110468160 (DDX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
110468160
NCBI-ProteinID:
XP_021381457
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Position
24:complement(4878652..4884266)
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AA seq
479 aa
AA seq
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MAGAERGLRGLGAGNGPGPGCPWHGAAPRRAEPGRGALRPRPAPRAAPRDDERVSLAELS
LMNKLIHTSLVESKQHVEILQRDPSSPLFSIKTFEELPLKKELLQGVYMMGFNRPSKIQE
QALPVMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRASASEKYPQCLCLAPTYELALQIGQ
VVRAIGKFCTDIKVNYAVRGNRVLKGTVLEEQIIIGTPGTTLDWCFKQRVLDLTKISLFV
LDEADIMIDTQGLSCQSIRIQRALPNSCQVLLFSATYKEPVRAFAERIIPNPIVIKLREE
ELTLSNIRQYFMVCQSSDEQYRALCNLYGSFIIGQVMIFCQTRRQADWLSGKMSRDGHQV
AILTAELTVVQRASVIQRFREGKEKVLIATNVCARGIDVQQVTTVVNFGLPVDEDGEPDF
ETYLHRIGRAGRFGHRGIAFSVVQRDTVQLVHKIEEYFQTTIKQLDPYDMDELEKLAAE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggctgagcgcgggctgcgcgggctgggcgccgggaacggccccgggccgggc
tgcccgtggcacggcgccgcgccgcgccgcgccgagccgggccggggcgcgctccggccg
cgccccgcgccccgcgccgcgccgcgggacgacgagagagtgtcgctggcagagctgtca
ctgatgaacaagttgatccacacatccctggtggagtccaagcagcacgtggagatcctg
cagcgggaccccagctccccactcttttccatcaagacctttgaggagctgcccctgaag
aaggagctcttgcagggggtttatatgatgggcttcaacagaccatccaaaatccaggag
caggctctgccagtcatgctggcgtacccgccccaaaatctgattgcccagagccagtca
gggacagggaaaacagcagcttttgtcttggccatgctgagcagagccagtgccagcgag
aaatatccgcagtgcctctgcctggctcccacctacgagctggctctgcagatcgggcag
gtggtgcgcgccattgggaagttctgcactgacatcaaggtgaactatgctgtccgggga
aaccgagttctgaagggcacagtgctggaggagcagatcatcatcggaacaccaggcacc
actctggactggtgcttcaaacaacgtgtcctggacctgacaaagatctccttgttcgtg
ctggatgaggctgacatcatgattgacacgcagggcctctcctgccagagcatccgcatc
caaagggctcttcccaacagctgccaagtgctgctgttctcagccacttacaaggagccc
gtgcgggcctttgcggagcggatcatccccaaccccatcgtgatcaagctgcgtgaggag
gagctcaccctgagcaacatcaggcagtacttcatggtgtgccagagctcggacgagcag
tacagggccctctgcaacctctatggcagcttcatcatcggtcaggtcatgatcttctgc
cagacccggaggcaggcagactggctgtcagggaagatgagccgggacgggcaccaagtg
gccatcctgacagcagagctgacggtggtgcagcgggccagcgtcatccagcgcttccgt
gagggcaaggagaaggtcctcatcgccaccaacgtctgtgccagaggcattgatgtgcag
caggtcaccaccgtggtgaacttcggcctccccgtggacgaggacggcgagccggatttt
gagacctacctgcaccgcattgggagggcgggacgcttcgggcaccgcggcatcgccttc
agcgtggtgcagagagacaccgtgcagctggtgcacaagatagaggagtatttccagacc
acgatcaagcagctggatccgtacgacatggacgagctggagaagcttgcagctgagtga
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