KEGG   Lonchura striata (white-rumped munia): 110468199
Entry
110468199         CDS       T05897                                 
Name
(RefSeq) nucleoporin GLE1-like
  KO
K18723  nucleoporin GLE1
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03013  Nucleocytoplasmic transport
lsr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110468199
   03015 mRNA surveillance pathway
    110468199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110468199
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110468199
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 110468199
NCBI-ProteinID: XP_031361597
LinkDB
Position
10:complement(1854682..1878202)
AA seq 636 aa
MLHMKGFAVRVICARVFDQFVTQAAVEPLNWIGRSGLDAEPSVFYSRMVFQSLDTRLQPP
GSHKSKGSLIRQEQLMARKKLDSPRCPLPVKKPVVVKKAVPLAVPKPVYRAPASFLDPRM
ALLLGKQAESLKQRPVAVDTALRLSEKFALDCISGKDMRENQNHHPSTEPQNSVTITTLP
TALPNPVTMWQKENDHLSLLEINQEVTPAGVSSTVAKVEGCIRMYEEMHRLKARERLRRR
QEELEKMVRAAHAQATEHLKRFDELRELKRHQEFQELQEVMEKSSKEAQRQQEKLKEEHR
HRAKILNLKQQKEGLQVKTEESIMQWYLQLQDAAEQCVAAFSEIGNCKGNAEVKKIKTNL
QKAATIPVSQISSISGSKLREVFDKINNLLSGKPVHSEGQMVLVTQHPQGLDFVSYKLAE
KFVRHGEGEVAFHHDSAFPIAVVLSGIWELHPRVGDIFLAHLHKKCPYSVPFYPTRKEGT
SVEEYQRLLGYEVHDSTVEEQDHFLKRMSGMIRLYAAIIQLRWPYGNKQGAHPHGLSYGW
RWLAQMLNLEPLADVTAMLLLDFLEVCGNALMKQYGIQFWKTMLFIQKSYIPRIEAVSGS
GQMGCLSRLKTFVQKCLQVEEIPLPKGIPTPSFWRT
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgttacatatgaagggcttcgctgtcagggtgatctgtgctcgtgtttttgaccaattt
gttactcaggcggccgtggagcccctgaactggattgggcggtccggacttgatgccgag
ccctcggtgttctacagccgcatggtgttccagagccttgacaccaggctgcagcccccg
ggcagccacaagagcaagggcagcctgataagacaggagcagctgatggccagaaagaag
ctggacagtcccaggtgccccttgccagtgaagaagccggtggtggtgaagaaggcagtt
cccctagcagtccccaagccagtgtaccgtgctcccgcctccttcttggatcccaggatg
gctctgctactcgggaaacaagcagagagcctgaagcagcgaccagtcgctgttgatact
gcactgcggctgtcggagaagtttgctttggattgtatatcaggaaaggacatgagagag
aaccagaaccatcacccctcaacggagccacaaaatagcgtcactatcaccactttgccg
acagccctgccaaatcctgtgaccatgtggcagaaggaaaatgatcaccttagtcttctg
gaaataaatcaggaagttactccagcaggtgtgtcatctacagttgcaaaagtggaaggc
tgcattcggatgtatgaagagatgcacaggctgaaagcaagggagaggctgagacggcgg
caggaggagctggagaagatggtgagggcagcccatgcccaggccactgagcacctgaag
cgctttgatgaactgagggagctaaagcggcatcaggaattccaagagttgcaagaagta
atggagaagagctcaaaggaggctcagaggcagcaagagaagttgaaggaagagcaccga
cacagagcaaagatattgaacctaaagcagcagaaggaaggccttcaagttaaaacagaa
gaaagtatcatgcagtggtacctgcagcttcaggatgctgctgagcaatgtgttgctgct
ttcagtgaaattggaaactgcaaaggcaacgctgaggtgaagaagataaaaacaaacttg
cagaaagcagctacaatccctgtgagccagatctccagcatatcaggctctaagctgaga
gaggtgtttgataagatcaataacctgctctctgggaagcctgttcactctgaaggccaa
atggtgttggtgactcagcatccacaggggctggactttgtttcttacaaacttgcagag
aagtttgtgagacatggggaaggagaagtagcttttcaccacgattcagctttcccaatt
gctgtggtgctctcaggaatctgggaattacaccctcgagttggagacatctttttagct
cacctgcacaagaagtgcccatattctgtgcccttttaccctactcggaaagaagggact
tctgtggaagagtatcagaggctgcttggatatgaagttcatgattctacagtggaagaa
caagatcattttctcaaaaggatgtcaggaatgattcgtctctatgctgccatcattcag
ctccggtggccttacggaaacaaacaaggggctcatcctcacggtctgagctatggatgg
cgctggctggcgcagatgttgaatctggagcctctggcagatgtgacagctatgctgctc
ctggatttcctggaagtgtgtggcaatgctctgatgaagcagtatgggattcagttctgg
aaaacaatgctctttatccagaaatcctatatcccaagaattgaagctgtgtccggttct
gggcagatgggctgtttgtcacgcttaaagacttttgtgcagaaatgtttgcaggtagag
gaaattccattaccaaagggcattccaacaccttccttttggagaacataa

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