Lonchura striata (white-rumped munia): 110468199
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Entry
110468199 CDS
T05897
Name
(RefSeq) nucleoporin GLE1-like
KO
K18723
nucleoporin GLE1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
lsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110468199
03015 mRNA surveillance pathway
110468199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110468199
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110468199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
110468199
NCBI-ProteinID:
XP_031361597
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All DBs
Position
10:complement(1854682..1878202)
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AA seq
636 aa
AA seq
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MLHMKGFAVRVICARVFDQFVTQAAVEPLNWIGRSGLDAEPSVFYSRMVFQSLDTRLQPP
GSHKSKGSLIRQEQLMARKKLDSPRCPLPVKKPVVVKKAVPLAVPKPVYRAPASFLDPRM
ALLLGKQAESLKQRPVAVDTALRLSEKFALDCISGKDMRENQNHHPSTEPQNSVTITTLP
TALPNPVTMWQKENDHLSLLEINQEVTPAGVSSTVAKVEGCIRMYEEMHRLKARERLRRR
QEELEKMVRAAHAQATEHLKRFDELRELKRHQEFQELQEVMEKSSKEAQRQQEKLKEEHR
HRAKILNLKQQKEGLQVKTEESIMQWYLQLQDAAEQCVAAFSEIGNCKGNAEVKKIKTNL
QKAATIPVSQISSISGSKLREVFDKINNLLSGKPVHSEGQMVLVTQHPQGLDFVSYKLAE
KFVRHGEGEVAFHHDSAFPIAVVLSGIWELHPRVGDIFLAHLHKKCPYSVPFYPTRKEGT
SVEEYQRLLGYEVHDSTVEEQDHFLKRMSGMIRLYAAIIQLRWPYGNKQGAHPHGLSYGW
RWLAQMLNLEPLADVTAMLLLDFLEVCGNALMKQYGIQFWKTMLFIQKSYIPRIEAVSGS
GQMGCLSRLKTFVQKCLQVEEIPLPKGIPTPSFWRT
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttacatatgaagggcttcgctgtcagggtgatctgtgctcgtgtttttgaccaattt
gttactcaggcggccgtggagcccctgaactggattgggcggtccggacttgatgccgag
ccctcggtgttctacagccgcatggtgttccagagccttgacaccaggctgcagcccccg
ggcagccacaagagcaagggcagcctgataagacaggagcagctgatggccagaaagaag
ctggacagtcccaggtgccccttgccagtgaagaagccggtggtggtgaagaaggcagtt
cccctagcagtccccaagccagtgtaccgtgctcccgcctccttcttggatcccaggatg
gctctgctactcgggaaacaagcagagagcctgaagcagcgaccagtcgctgttgatact
gcactgcggctgtcggagaagtttgctttggattgtatatcaggaaaggacatgagagag
aaccagaaccatcacccctcaacggagccacaaaatagcgtcactatcaccactttgccg
acagccctgccaaatcctgtgaccatgtggcagaaggaaaatgatcaccttagtcttctg
gaaataaatcaggaagttactccagcaggtgtgtcatctacagttgcaaaagtggaaggc
tgcattcggatgtatgaagagatgcacaggctgaaagcaagggagaggctgagacggcgg
caggaggagctggagaagatggtgagggcagcccatgcccaggccactgagcacctgaag
cgctttgatgaactgagggagctaaagcggcatcaggaattccaagagttgcaagaagta
atggagaagagctcaaaggaggctcagaggcagcaagagaagttgaaggaagagcaccga
cacagagcaaagatattgaacctaaagcagcagaaggaaggccttcaagttaaaacagaa
gaaagtatcatgcagtggtacctgcagcttcaggatgctgctgagcaatgtgttgctgct
ttcagtgaaattggaaactgcaaaggcaacgctgaggtgaagaagataaaaacaaacttg
cagaaagcagctacaatccctgtgagccagatctccagcatatcaggctctaagctgaga
gaggtgtttgataagatcaataacctgctctctgggaagcctgttcactctgaaggccaa
atggtgttggtgactcagcatccacaggggctggactttgtttcttacaaacttgcagag
aagtttgtgagacatggggaaggagaagtagcttttcaccacgattcagctttcccaatt
gctgtggtgctctcaggaatctgggaattacaccctcgagttggagacatctttttagct
cacctgcacaagaagtgcccatattctgtgcccttttaccctactcggaaagaagggact
tctgtggaagagtatcagaggctgcttggatatgaagttcatgattctacagtggaagaa
caagatcattttctcaaaaggatgtcaggaatgattcgtctctatgctgccatcattcag
ctccggtggccttacggaaacaaacaaggggctcatcctcacggtctgagctatggatgg
cgctggctggcgcagatgttgaatctggagcctctggcagatgtgacagctatgctgctc
ctggatttcctggaagtgtgtggcaatgctctgatgaagcagtatgggattcagttctgg
aaaacaatgctctttatccagaaatcctatatcccaagaattgaagctgtgtccggttct
gggcagatgggctgtttgtcacgcttaaagacttttgtgcagaaatgtttgcaggtagag
gaaattccattaccaaagggcattccaacaccttccttttggagaacataa
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