Lonchura striata (white-rumped munia): 110468242
Help
Entry
110468242 CDS
T05897
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X2
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110468242 (TRUB1)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110468242 (TRUB1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110468242 (TRUB1)
Prokaryotic type
110468242 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
110468242
NCBI-ProteinID:
XP_021381599
LinkDB
All DBs
Position
6:27975577..28007607
Genome browser
AA seq
285 aa
AA seq
DB search
MAGEAGGAALGRAAEKLFSLSGLFAVRKPKGRTSAAVLNLLKERLLAEAGVQTKGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCASVQELTRTKQGPFTLEEHAL
HEDKWTIDDIAQSLEHCTALLLGEPARKKLKTEHPGETAVICEEK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgccgccgagaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacgcacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaaagggaacaaaagaaatcag
gttttgaaaattggacatggagggactttggacagtgcagccacaggagtcctggtggtt
ggtattggaaaaggaacaaaaatgctggggactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatactttagatgctacaggaaaagtaactgaa
gaaaagccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagcctgctcggccagtgagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctggatgttgaatgtggt
ggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacctgtgcc
tcggtgcaggagctgacgcgcaccaagcaggggccgttcacgctggaggagcacgccctg
cacgaggacaagtggacaattgatgacattgcccagtccttggagcactgcacagccctg
ctcctgggagagccagctcggaaaaaactgaagacagagcatcctggtgaaactgctgtg
atctgtgaggaaaagtga
DBGET
integrated database retrieval system
