Lonchura striata (white-rumped munia): 110468254
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Entry
110468254 CDS
T05897
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110468254 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110468254 (VTI1A)
Membrane trafficking [BR:
lsr04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
110468254 (VTI1A)
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
Laminin_II
MMPL
MFS_2
Sec8_N
DUF1664
Fusion_gly
Peptidase_S46
Mer2
FapA
SKA2
Motif
Other DBs
NCBI-GeneID:
110468254
NCBI-ProteinID:
XP_021381665
UniProt:
A0A218UTW7
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Position
6:26585706..26842221
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AA seq
224 aa
AA seq
DB search
MSSEFESYEQDFAVLTADITGRIAKVPKLVGDEKKQMVANVEKQLEEARELLEQMELEVR
EIPPQSRGMYSSRMRSYKQEMGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRILTGMLRRIIQNRILIVVLAVIIIFTTMMAIYFSVRGR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagttcgagagctacgagcaggacttcgccgtgctcacggcagacatcacg
ggccgcatcgcgaaggtgcccaagctggtaggagatgagaagaagcagatggttgcaaat
gttgagaaacagcttgaagaagcaagggaactgcttgagcagatggaacttgaagttcga
gagatcccacctcaaagccgagggatgtacagcagtcgaatgagaagctacaaacaagaa
atgggaaaacttgaagctgatttcaaaaggtcacgaatcgcctacagtgatgaggtgcgg
aatgaactcctgggggatgacgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgagcagattggacaggagatgcttgaaaacctc
agccatgacagagagaagatccagcgtgctcgggaaaggcttagagaaacagatgcaaac
ctagggaagagttccaggattttgacgggaatgttgcgaaggatcatccaaaaccggatt
ttgatcgttgttctggcagtcatcatcatcttcaccaccatgatggctatttatttttct
gtcaggggacgctga
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