Lonchura striata (white-rumped munia): 110468260
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Entry
110468260 CDS
T05897
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110468260 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
110468260
NCBI-ProteinID:
XP_021381679
UniProt:
A0A218UT75
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All DBs
Position
6:26016752..26080642
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVQSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHLLPSAIK
ELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaacctaggaaaagaaaaggactgtaaagagaaggatccaaaagtccagtcg
tcaaaagaaagggagaaggaggcaaaggcctccggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacaataaaaagacctaatcctgccacaggt
actcgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattctatgcgcttggacttgtccaagaggtctatacacttgcttccatcagctatcaaa
gagctaacacagttaacagaactttatttatacagtaacaaactgcagtgcctgcctgca
gaggtgggctgtcttgtgaacctggtgacactggctctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcacaacaaa
ctgcgagaaatcccctcggtggtgtacaggctaagctccctcgccactctgtacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgagcatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgaactcctggatctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccc
aagtctttagcaaaatgcagtgaacttgatgagctgaacttggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacattggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacatctctccccttggatttcgggaca
tggacaagtatggtagaactgaatttagcaactaaccagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaac
aatcagctgaccacccttccaagaggaatcggtcaccttaccaatctgacgcaccttggg
ctcggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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