Lonchura striata (white-rumped munia): 110468264
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Entry
110468264 CDS
T05897
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04110
Cell cycle
lsr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110468264 (SMC3)
04114 Oocyte meiosis
110468264 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110468264 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lsr00535
]
110468264 (SMC3)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110468264 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
110468264 (SMC3)
Proteoglycans [BR:
lsr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110468264 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
110468264
NCBI-ProteinID:
XP_021381691
UniProt:
A0A218UUD8
LinkDB
All DBs
Position
6:25824024..25847538
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccgttcagctctaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttattgcacgaaggcacaggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattccgacaacaggttaccgattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaacgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatatagtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagactgaagttactaaga
gaagtagccggtaccagagtgtatgatgaacgtaaagaggagagtatttcactaatgaaa
gaaacagagggcaagcgagagaaaatcaatgagttgttgaaatacattgaggagcgactg
catactctagaagaggagaaagaagagcttgcacagtaccagaaatgggataaaatgagg
agagcattagaatacaccatttataatcaggaacttaatgaaacccgagctaagcttgat
gagctttctgctaaacgagagacaagtggagaaaaatcaagacagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagactaag
atttctgcaatgaaagaagagaaagagcaactcagtgctgaaagacaggagcaaattaaa
cagaggactaaattagagttgaaggctaaagatcttcaggatgaattagctggcaacagt
gagcaaaggaaaagactactaaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggctgaaacagagccaaaatttaacagcgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaagaaagaacagatctttatgcaaagcaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggactta
gaggatacagaggcaaacaaggagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgagctacagagtgaaagaaattatttatggagagaagagaatgcagaacaa
caagctcttgctgcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattctgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaaccaacatgttctgaatggctatcatggaatcgtgatgaataacttt
gaatgtgaaccagcattctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaagtcagtacaaagatcctaatggaatttaataaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgagatacaatccaagatttgat
aaagctttcaaacatgtttttgggaagactttaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcacaatggattgtatcactctagaaggtgatcaagtcagccac
cgaggtgctttgactggaggttattatgacaccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaggaacttggtgaacttgaagcaaagctcaatgaaaactta
cgtaggaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaagaggcagcagtctgaaaagacgtttatgcctaagcaacgtagcttg
cagagcctggaggcaagtttacatgccatggagtcaactagagaatcgttaaaagcagag
ctggggacagatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactgcagcaagaaaacagacagcttttgaatgagaggattaaa
ttagaaggcattatcacaagagttgaaacatacctcaatgagaatctaagaaaacgcttg
gaccaagtggaacaagagctgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaactcgaggctatcaacaaacgagtgaaggatacactggcacggtca
gatgacctggataactctattgacaaaacagaagcaggaattaaagaacttcaaaagagc
atggaacgctggaagaacatggaaaaggagcatatggatgctattaaccatgatacaaaa
gaacttgaaaaaatgaccaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaataagagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggagctggacaggggctacaaatccatcatggaactgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccaaaagttagtacctggtggtaaggccacactggtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagtactgagagcgaaagggga
tctggatctcagagcagtgttccatctgtagatcagttcactggagttggcataagggta
tcgttcacagggaagcagggggaaatgagagaaatgcagcaactttcaggtggacagaag
tctttagtggccctggccctaatatttgctatccagaaatgtgatccagctccattttac
ttgtttgatgaaattgaccaagccttggatgcccagcatagaaaagctgtgtcagatatg
attatggaactggctgaacatgctcagtttattacaacaacttttaggccagaactgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaagtcagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggttaa
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integrated database retrieval system
