Lonchura striata (white-rumped munia): 110468325
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Entry
110468325 CDS
T05897
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110468325 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110468325 (XRCC5)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
110468325 (XRCC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
110468325
NCBI-ProteinID:
XP_021381844
UniProt:
A0A218VB83
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Position
7:complement(23983878..24040831)
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AA seq
725 aa
AA seq
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MAPGGKVAIVLCLDVGLTMSSSPGEESSLDQAKKIMTKFLQRQVFAESKDEVAVVLFGTN
GTRNDLASEDQYQNITVHRSLMLPDFDLLEDIQNVIKAGSAQADFLDAIIVCMDLLQKQT
IGKKYEKRHIELFTDLSSPVSEDQLGIIIANLKKTEISLQFFLPFPVSVEGTEDTSASVH
AHMHKNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMERKP
MPWPCQLTIGPNLSIRIVAYKSVTEENVKKVWAIVDAKTLRKEDVQKETVYCLNDDDETE
VQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEAKCFSVLGFTRSSQIQRHYYMGNQALKV
FAAKGDENAAVAFSALVRALDESKMVAVVRYAYDRRCNPQIGVAFPYIKDAYECLIYVQL
PYMEDLRQYVFSSLKNSKKYFPTVDQLSAVDSLIDSMNLVHEDGETFEDLFKPSKIPNPH
FQRLYQCLQHKAFYPDKPLPPIEQHILEMLEMPCVVRERCQTPLERVKALFPLKEVGKKK
EEKTAQDIFKDNEDEPGLKKPKIEDEEESFSIMKLAEGNITSVGSVNPAEDFRILVRKKN
ADFKDVSQQLINRIDQFLENKGSQYYMKGINCIRVFREEAMKLSKVQCFNDFLQALKAKL
EDKAVSDFWEIMVQERISLITKDEAEGSLVTGEEAEKFLAPKEQKNETLPPTDEGGDVDD
LLDMM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccggcggcaaggtggcaatagtgctgtgcctggatgtaggccttacaatgagt
tcttcccctggtgaagagtcttctcttgaccaagccaagaagattatgacaaagtttctg
cagagacaggtttttgctgagagtaaagatgaagtcgctgtagttttgtttggcactaat
ggcactagaaatgaccttgccagtgaagatcaataccaaaacattactgtacatagatca
ctaatgctgccagattttgatctgctggaagacattcaaaatgtgattaaagcaggttct
gcacaagcagactttttggatgctattattgtatgcatggacttgcttcagaagcaaaca
ataggaaagaaatatgagaagaggcacattgaactgtttacagaccttagtagtcctgtc
agtgaggatcagctgggaattatcattgctaacttgaagaaaacagaaatttcacttcag
ttttttctaccatttccagtgagtgttgaaggaactgaagatacaagtgccagtgtacat
gctcatatgcacaaaaactcttttccaataaagggtttaactgaacaacaaaagcaaggt
attgatgtggtgaggaaactcatgtatactttggatgaagaaggaggtctggaagaaatt
tatactttcagagagagcctggaacgcctttcaatgtttaagaaaatggaaagaaagcct
atgccttggccctgccagctcactattggtcctaatttgtctataaggattgtggcctac
aaatcagtcacagaagagaatgtgaaaaaagtttgggcaattgtggatgctaaaaccctc
agaaaagaggacgtgcaaaaagaaactgtttactgcttgaatgatgatgatgagacagag
gttcagaaagatgataccattcaaggttttcggtatgggagtgatatagttcctttttcc
aaggaagatgaagagcaaatgaaatacaaaacagaagctaagtgtttttctgttttggga
tttactagatcctctcagatccagaggcattactacatgggcaaccaagctctgaaggtc
tttgcagcaaaaggtgatgagaatgcagcagttgctttttctgcacttgttcgtgcattg
gatgagtcgaaaatggtggctgtagtgcgctatgcttatgatagaagatgcaacccacaa
attggagtagcttttccgtatattaaggatgcatatgagtgtcttatctatgtgcagcta
ccctatatggaagacctaagacaatatgtattttcatccttgaaaaacagtaaaaaatac
tttcctacagtggatcagttatctgctgttgactcactgattgattctatgaatttggtt
catgaagatggagaaacttttgaggacctatttaagcccagcaaaattccaaaccctcat
tttcagaggttatatcagtgtttgcagcacaaggctttttaccctgataagccactgcca
ccaatagaacagcacattttagaaatgctggagatgccttgtgtggtaagagaaaggtgt
cagactcctctggaaagagtaaaagcactttttcccctaaaggaagttggcaagaaaaaa
gaagagaagactgcacaagacatcttcaaagacaacgaagatgaacccggccttaagaaa
ccaaaaattgaagatgaggaagaaagctttagcattatgaaacttgctgaaggcaatatc
acctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaagaaaaat
gctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcagttcttggaaaat
aaaggttcacagtactacatgaaagggatcaactgtatcagagtttttagagaggaggcc
atgaagctgtccaaggtgcagtgctttaatgattttctgcaggccttgaaagcaaagttg
gaagataaagccgtatctgatttctgggagatcatggtacaagaaagaatttctttgatc
actaaagatgaagcagaaggaagtttggtgacgggtgaagaggctgagaagttcttggct
ccaaaagaacagaaaaatgaaactctgcctcctacagatgaaggtggtgatgttgatgat
ctgctggacatgatgtga
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