Lonchura striata (white-rumped munia): 110468330
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Entry
110468330 CDS
T05897
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110468330 (SMARCAL1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110468330 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
OmpA
Motif
Other DBs
NCBI-GeneID:
110468330
NCBI-ProteinID:
XP_021381859
UniProt:
A0A218VC38
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All DBs
Position
7:complement(23811087..23845517)
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AA seq
964 aa
AA seq
DB search
MSSGLTEEQKRRIEENRRLALARRAERLAAQGAGHVGIAAPPQKGQSLGNLGSSKEENNH
VGLTGQHRQNPNTPVEQRSCLQKGYNHYPANQQMAGSHREQQKSCSEDSEQTSGLKQFPA
MIPNSLSYSHKHYLDVGSQEHEQHTSINHGTFQQPKCCPAFKSPTGPPHPRVTDNGHPDG
SKDLQTQNKSAIKYVSPPSSATLSNSEMLININRPTERTGGGFVSQASGGMQKLTSSAGV
ASTFESHKKANVTKGKCVKYGEDRFQVEIGYNAELIAVFKKVPSKAYDPAMKKWNFSMED
YSSVLEAANQLSSVILAPLEGKNMVGLASGSHFVGSGVDVKSLLKMCKNWKKSSALVKGK
CVLISRLRFEVDIGYSAEVIGVFKKMESRNYDMNTRKWNFLLEDYPKLMEVLLSLVSVEV
EPLPEAVIKAFAPQLQRSPSLTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRKGRLLL
ADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFHKWLPSLSPGSTNVIVSGK
DNLTGSLINIISFDLLSRMDKQLKSTFQVVIVDESHFLKNTKTARCQAAMPLLKAAKRVI
LLSGTPAVSRPAELYTQIAAVQPTFFPQFHSFGLRYCDARKMPWGWDYSGSSNLTELKIL
LEESIMIRRLKSDVLSQLPAKQRKMVVVALEGISAKTKAALAAEAKKMAKGYESKQQEKE
GLLVYFSRTAEAKIGSVIEYILELLESGNNKFLVFAHHKIMLDAVAAELKKKHIEHIRID
GSTSSAERQSLCQKFQLAEKHAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQAED
RVHRIGQTSSVNIHYLVAKGTADDYLWPLIQEKIKVLGEAGLSEANFSETAESTNYCPKT
DPKQKTIYDLFQKTFSESRDDADDVLFLEAADAGCEFDSGSALQDREAETCSVSPKKKRR
IEEV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgggccttacagaggagcaaaagagaaggattgaggagaaccgccggctggct
ttggctaggagagcagagaggctggcagcccagggagctgggcacgtgggcatcgctgcg
cctccgcagaaagggcagagtctgggcaatctgggaagctcgaaggaagaaaacaatcat
gtcgggctcaccggccagcaccgacagaatccaaacacgcctgtggagcagaggagctgt
ctccagaaaggctacaaccattacccagcaaaccaacagatggctggctcacacagagag
cagcaaaagagttgttcagaggactcggaacaaacaagtggcctaaagcagttccctgct
atgatcccaaattctctgagttattcccataaacattacttggatgttggtagtcaggaa
catgaacaacacacttcaattaatcatggaacattccagcagcccaaatgctgcccagct
ttcaaaagccccacaggaccacctcatccaagagtcactgataatgggcaccctgatggc
agtaaagatttacaaactcagaacaaatctgccattaaatatgtttcaccaccaagcagt
gccaccctgagcaattcagaaatgctgataaacataaacagaccgacagaaagaacaggg
ggaggttttgtctctcaggccagtggtggcatgcagaagctgaccagctctgctggtgtg
gcctctacctttgaaagtcacaagaaagcaaatgttacaaaaggaaaatgtgtgaaatac
ggggaagaccgattccaggttgaaataggctacaatgctgaacttattgctgtgtttaag
aaggtaccaagcaaagcctatgatcctgctatgaaaaaatggaatttcagcatggaagat
tacagcagtgtcttggaagcagcaaatcaactttcatcagtaattctggcaccactggaa
ggaaaaaatatggttggcttggcatcaggctctcattttgttggcagtggggttgatgtg
aaatccctcttgaagatgtgtaagaactggaagaaatcctcagcccttgtcaaagggaag
tgtgtgcttatctctcgcttgcgatttgaggtcgatattgggtattctgcagaagtgatt
ggggttttcaaaaagatggagtccagaaattatgatatgaataccagaaagtggaatttc
ctgctggaggattaccccaaactaatggaagtgttactgagcctcgtgtctgtagaagtg
gagccactgcctgaagcagtaattaaggcctttgctcctcagctgcagagatctccatca
ctgacagacattcctgatgctgacctttcagtagtggactccaaaattgtgacaagcctc
atgccctttcagcgggaaggtgtgaattttgcaatttccaggaagggacgtttgctcctt
gcagatgacatgggcctgggcaagaccatccaggccatctgcattgctgcctattaccag
caggaatggcccttgctggtggtcactccttcttctgtgagatttacatgggcagaggca
ttccacaaatggcttccatccttgagtccaggaagcaccaatgtcatagtgagtgggaaa
gacaacctaacaggaagcttgatcaacatcatcagttttgatctcctcagcaggatggac
aagcaacttaagagcacattccaagtagttattgttgatgaatctcatttcctgaagaac
acaaaaactgcacgctgccaagctgccatgcctctactcaaggctgccaagagagtgatc
ctgctttcgggaacgccggccgtgtcgcgacccgcggagctctacacgcagatcgccgct
gtgcagccgaccttcttcccacagttccactccttcgggctgcgctactgcgatgccagg
aagatgccatggggctgggattactctggatcatccaacttaacggaactgaaaattttg
ctggaagagtccatcatgatccgacgtctgaaatcagatgtgctttcccagcttccagca
aagcaacgcaaaatggtcgtggtggctcttgaaggcattagtgcaaagaccaaagctgcc
ttggcagccgaagcaaagaagatggccaaaggatatgaaagtaaacaacaggagaaggaa
ggccttctcgtctacttcagcagaacagcagaagctaaaatcggctcagtcatagagtac
atcctggagttactggaaagtgggaataataaattcctggtgtttgcacatcacaagata
atgctggatgcagtagctgcagagttgaagaagaaacacatcgagcacattcgcattgat
ggctccacatcttcagctgagcggcagtctctgtgccagaagttccagctggcagagaag
catgctgtggctgtcctttcccttactgctgcaaacatgggcctgacactgtctgctgca
gatctggtggtgtttgcagagctcttctggaacccagggattttgatccaagcagaagat
cgggtacaccgaattggccagaccagctccgttaacattcactacctggtggctaaaggc
acagcagatgactacttatggccattgattcaggagaagatcaaagtgctgggtgaagct
ggtctttcagaagccaatttctctgaaacagctgagtcaactaattactgtcctaagaca
gacccaaagcagaagacaatctacgaccttttccaaaagaccttctctgagagcagagat
gatgctgatgatgttttgtttttggaggcagctgatgctggctgtgagtttgactctggc
agtgccttgcaagacagagaagcggagacatgttcagtgagtccaaaaaaaaagcggcgt
attgaggaagtgtaa
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