Lonchura striata domestica (Bengalese finch): 110468364
Help
Entry
110468364 CDS
T05897
Name
(RefSeq) AP2-interacting clathrin-endocytosis protein
KO
K10480
BTB/POZ domain-containing protein 8
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110468364
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
110468364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
BTBD8_C
BACK
KLHL33-like_BTB_POZ
Motif
Other DBs
NCBI-GeneID:
110468364
NCBI-ProteinID:
XP_021381958
LinkDB
All DBs
Position
8:complement(14531183..14566297)
Genome browser
AA seq
1738 aa
AA seq
DB search
MARCGGGAAPKGPGPAAAERQRLKEALAEQLRRDLDRLLAEGTHSDVTFRVGGEEVRVHR
AVLLARAPLLCERLAGGQLQLEPAELREFLRILYSSDINLKEIEELFMRKIQESNNPTLQ
IAQKNVHCLGQSKRTPVDQNTPSGAVQKGIVCWPGIEEEIPEAVIDTESNKAAGGHSKVE
TASVLGEELLMLYKKCCCTDINICVEGKHFQAHRAILCARSSYFAAMLSGSWAESSQEHI
TLQGISHAEMNVVLHFIYGAILDFPDEVDAGHMLGIADMYGLDGLKEVAIYILKRDYCNF
FQKPVPGKQQPVLECMAIAHSLGVENLYAACMKWVGKHFARCFSEKSFANLPTELQNNCL
VMLINSLTPENAAFRLMESDRLINSLPRVKWTETAVALASQLHEECVTFIVANFLYVVQS
EGFSVLLQAQAMSSKPDLLELIFNAIEKSINNENSCFLLVAVDMLLDSENVKEMGFTCTI
QALRDKLWVFLVQSFYAVRHTEGWKLMRPDHQQKIQAAAFDKGDDRRLGKKPVFTSSQLN
KTTTASVGLRNTSWAEQSKKDCLGDSSTNRDKMKSDGLGASGHASTNRNTVSKTSKHEDV
KGKDGKKLVSKITKDSKPGEKAALPKARAVIKTKIENNGNVKAESMLTKQDTEKTSSASG
QKNSGSSKGLRNHEGKVAGARPKVLTVTSSMQNKTKPLKKTTGKESPSLVTVAATSSKSA
NSNMDIQTASEQTEEPKEDKSVEEGKKQTVVKTKVSVKVSNGVTTKNKKTELEANATTSS
LTKKATGKGCNEQNVQAVLKKKGNVSMNSAAQQKTQNTPTNSPKNQGPQGESPNSLKSGM
SPKHNEEKNMLQHLVQTTVPEKHPSAKKKSIKQSQTPATKTTSKVTPKTLAPSKNAEITN
SKDPKQKTAVLKSQSSAQKHSRSDCPVVQKNVHTTEHKGSGQKLEKNTANAVADQLHDNK
LLESCQSNRQKLPDSSETVQYKIQSESSPQIAEETIYKLNVSIQNDMETRQIYGDQTGIR
KTEDPDKDDNTAEFHCHAESSNDGYSDFSKETNQKVIVLGELVKDSKATKVCNEQSDQIN
SETSRNYGENVLSSFSQVTNKDDETSSSQIHVEGFLTIDELCDISALTEYKSVATDLDDA
SECSTEQITEKYSPNYTELIEPMEMPENHENAEIPFVDHWNTGAVDPKESPESDTGSATT
SSDDIKPRSEDYDAGGSQDDEGSNERGISKCSTMLCHDFLGRSSSDTSTPEELKIYDSSL
RIEVKVKKESSDVFRVNSTSDDEIPRKIWSHQESSRTTTRESKSSTFSSAQFTQEADQVS
SSADETEDDRSEAENVAENFPPSNVPTQPFQGIDNLAFEDATENDTASQEFSKTKNFKRS
VLLSVDECEELGADDKVETHTSRQHSIDSLTPSEVFDSVSQEHHGTTFYSRYSLETEEGF
LAGKQQKDRDNRLDKIGSSVLHLRGTEIPGKDNQGASMTEQNCPEKVYSAGSPHPGENQQ
VNMKNEVASEFHTCNKYLDNDAKSQERPCHLDLQQRETNSDVQKSSSAKPVEASKNQMLT
QESQVRDSQPATTECANTDLLPGDIDDYDTMAQTCIYEHRPSKTLSPIYEMDVGEAIEQR
MDSETAVLEMDFEDQQFAEQDWTLLRQLLSEQDSNIDFKNSLPEDLNLAQCLINQTLFLA
RDGSNPQGTSQVDTFSRWTELMSPLDDSSASITVASFSSEDCSSPQGEWTILELETHH
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctgcggcggcggcgcggcgccgaagggccccggcccggcggcggcggagcgg
cagcggctgaaggaggcgctggccgagcagctccggcgggatctcgacaggctgctggcg
gaggggacccactccgacgtgaccttccgagtcggcggcgaggaggtgcgggtgcaccgg
gcggtgctgctggcgcgggcgccgctgctctgcgagcgtctggcggggggacagctacag
ctggaacccgcggagttacgggaattcctgcggattctgtattcatctgatataaatctt
aaagaaattgaggagctgtttatgaggaaaatacaagaaagcaacaatcctactcttcag
attgctcaaaaaaatgtacattgtcttggacaaagtaaaagaacaccagttgaccagaat
actccaagtggagctgtgcagaaaggaattgtttgttggcctggtattgaggaagaaatt
ccagaagcagtcattgatacagaaagcaacaaagccgctggaggtcattccaaagtagaa
accgcatctgtgttaggagaagagttattgatgctctacaagaagtgctgttgtacagat
attaatatttgcgtagaaggcaaacattttcaagctcacagggctattttatgtgccaga
tctagttactttgctgccatgctgagtggaagttgggctgagagctctcaagagcacatc
actcttcaaggtataagccatgcagaaatgaatgttgtcttgcattttatatatggagct
attctggacttcccagatgaagttgatgctggtcacatgttgggcattgcagacatgtat
gggctggatggactaaaagaagtagctatctacattttgaaaagagattactgcaatttc
ttccaaaagcctgttcctggcaaacagcaacctgtactagagtgcatggctattgcccat
tcactgggagtggaaaacctatatgctgcttgcatgaaatgggtaggaaaacattttgca
agatgtttttcagagaaaagctttgccaatttacctactgaacttcagaacaattgtctt
gttatgttgattaactctttgacccctgagaatgctgctttccgtttgatggagagtgac
cggctgatcaatagcctgccccgagtgaagtggacagagacagctgtggccttggcatca
cagctacatgaggaatgtgtaacctttattgttgcaaacttcctatatgtagtacaaagt
gaaggcttctctgttttgttgcaggcacaagcaatgagcagcaaacctgacctcctagaa
ctaattttcaatgcaattgaaaaaagcattaataatgaaaatagctgctttcttcttgta
gcagtggatatgttgttggactccgaaaatgtgaaggagatgggttttacgtgcacgatc
caggcgctgcgtgataagctctgggtcttcctggttcagtctttttatgctgttcgtcac
acagaaggctggaagctgatgaggccagaccatcaacagaaaatacaagcagctgcattt
gacaagggtgatgaccgaagacttggcaagaaacctgtattcaccagttctcagctaaat
aaaactactacggcatctgttggtctaaggaatacttcctgggcagaacagagcaagaaa
gattgcttgggagattcttccactaatcgggataaaatgaaatctgatggattaggagca
tctggacatgcatcaaccaatagaaacactgttagtaagacttcaaagcatgaggatgtt
aaggggaaagatggcaaaaaattagtttccaagattactaaggattccaaacctggggaa
aaagctgctctgccaaaggctagagctgttataaagacaaaaatagaaaataatggaaat
gtgaaggctgaaagcatgcttaccaagcaagatacagaaaagacatcatctgcaagtgga
caaaaaaattcaggaagtagcaaaggactaaggaaccatgaaggaaaagttgcaggtgcc
agacctaaagtgctgacagtaacctcaagcatgcagaacaaaacaaagccattgaaaaaa
accacagggaaggaatctccctccttggtgactgtggcagcaacttcaagcaagtcagca
aattcaaacatggacatccagactgcgagtgaacagacagaggaacccaaagaggataaa
tctgtagaggaggggaaaaaacagactgtagtgaaaacaaaggtatctgtgaaggtatca
aatggagtcaccaccaaaaataaaaagactgagcttgaggctaatgccacaacaagcagt
ctgacaaaaaaagcaacaggaaaagggtgtaatgagcaaaatgtacaagctgttctaaag
aaaaaagggaatgtgagtatgaattctgcagcacagcaaaagactcaaaacacacctacc
aattctcccaagaaccaaggacctcagggggaatcaccaaattcactgaaatcaggaatg
tctccaaaacataatgaagaaaaaaacatgttacaacacctggttcagacaacagtccca
gaaaaacatccttcagctaagaagaagagtattaaacaatcacaaacacctgcaacaaaa
accacttcaaaagtaacacctaagactctggctccatcaaaaaatgctgagattacgaat
agtaaagacccaaaacagaaaacagctgtattaaaatctcagtcctctgcccagaagcat
tcaaggagtgattgtcctgttgtccaaaagaatgtgcacaccactgagcacaaaggttca
ggacagaaacttgagaaaaacacagctaatgctgtggcagatcagcttcatgacaataaa
ttgctggagtcctgtcaatccaatagacaaaaattaccagattcttctgaaactgtgcaa
tacaaaatacaatccgaatcttctcctcaaattgcagaagaaactatttataaactgaat
gtttcaatacaaaatgacatggaaacaagacaaatctatggagatcagactggaattaga
aagactgaagatccagacaaagatgataatacagctgaatttcactgtcatgcagagtct
tccaatgatggatattcagacttttccaaggaaaccaatcaaaaggtgattgttttagga
gaactggtaaaagattcaaaagcaacaaaagtctgtaatgaacagagtgatcaaataaac
tctgaaacaagtcgtaattatggtgaaaatgttttgtcaagcttttcccaagtaaccaat
aaagatgatgagacatcatcttctcagatccatgtggaaggatttcttacaattgatgaa
ctgtgtgatatatcagccttgactgaatataaatcagttgcaacagatttagatgatgct
tcagaatgttccacagaacaaataacagaaaaatattcacctaattacacagagcttata
gagcctatggaaatgccagaaaaccatgaaaatgcagaaattccttttgtggaccattgg
aatactggtgctgtagatccaaaagagagtcctgaatccgatactggcagtgcaaccaca
tcatctgatgatataaaaccaagatcagaagattatgatgccggaggctctcaggatgat
gagggatccaatgaacgagggatttctaaatgcagtactatgttatgtcatgattttctt
ggaagaagcagcagtgacacaagtacacctgaggaattaaaaatttatgatagcagccta
agaatagaagtgaaagtgaaaaaagagagttctgatgtctttcgtgttaattcaacaagt
gatgatgaaataccaagaaaaatttggtcccatcaagagagttcacggaccactactaga
gaaagcaaaagttctacatttagtagtgcacagttcactcaggaagcagaccaagtttct
tcttctgctgatgaaactgaagatgacagatctgaagcagagaacgttgcagaaaacttt
cccccgtcaaatgttcctactcaaccgttccaaggaattgataatttagcttttgaggat
gcaacagaaaatgatactgcaagtcaggagttctctaaaactaaaaatttcaaacgctct
gttttactttcagtagatgaatgtgaggaattgggagctgatgataaagtggaaactcac
acttcacgtcagcactcaatagattctcttactccttcagaagtatttgacagtgtttct
caagagcaccacggaacgacattttattcaagatactcattggaaactgaagagggattc
ctggctggcaaacagcaaaaggatagagacaatagattggataaaattggaagttctgtc
ctgcatcttcgtggtactgaaatcccaggaaaggacaatcaaggtgcttcaatgactgaa
caaaattgcccagagaaagtatattcagcaggtagtccacatccaggagaaaaccagcaa
gtaaatatgaaaaatgaggttgctagtgaatttcacacatgcaataagtacttagacaat
gatgcaaaatctcaagaaagaccatgtcatctggatcttcagcagagagaaactaattct
gatgtgcaaaagagcagctctgcaaaacctgtagaagccagtaagaatcagatgctgact
caagaaagtcaagtgagagacagtcaaccagcaactactgaatgcgctaatactgattta
cttccaggagacatagatgattatgacacaatggcacaaacctgcatatatgaacatcgg
ccttcaaaaaccctttctccaatatacgagatggatgttggagaagcaattgagcagagg
atggattcagaaacagcagttctagagatggattttgaagatcaacagtttgcagaacag
gactggactctactcaggcaattgttatctgagcaggactcaaatatagatttcaaaaac
tctcttcctgaagaccttaacttagcacaatgtcttatcaatcagacactgtttctggca
cgcgatggttcgaatcctcagggtacctcacaagttgacacattcagtaggtggactgaa
ctcatgtctccacttgacgactcctcagcaagcattacagtggcaagcttttcatctgaa
gactgttcctcccctcaaggggaatggacaattcttgaactggaaacccatcattaa
DBGET
integrated database retrieval system
