Lonchura striata domestica (Bengalese finch): 110468390
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Entry
110468390 CDS
T05897
Symbol
OBSL1
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110468390 (OBSL1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
110468390 (OBSL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_5
C2-set_2
Izumo-Ig
Ig_C17orf99
CDC48_2
DUF4945
Motif
Other DBs
NCBI-GeneID:
110468390
NCBI-ProteinID:
XP_031361324
LinkDB
All DBs
Position
7:22305650..22320531
Genome browser
AA seq
2033 aa
AA seq
DB search
MEGFGGAPRFLAYPRAFTVQSGTNAVLSCQIMGDPQPSILWEKDKNTIEPSGRFHMESKG
DLYSLLVSCATPEDSGLYVCRAKNSVGETYTATVLRVEPAEPREGEGCSGSVAPAFLIAP
SSMRVCRGEDVMFTCRVSGQPCPVLEWEKDGHKLSELFESSHFAVGQKPEDWHFLKLFGA
RPQDGGVYVCRARSGSQEALAAAVLLVEPQALLDGLPNGSPAHGPEVLAERQRWRRHAAG
RRMAPETWVPNGVVPARVPGAKAFAVSAGKHAKFRCYVTGKPKPEIIWQKDGEPLAPGRR
HLIYEDREGYFILKVLYCKPQDQGLYMCTASNTAGQTLSAVQLQVKEHRLRFQVQLADVE
VAEREDAVLECQVPLETIPTSWYLEDRELQPSHKYVMEEQGVVRRLTIRDARIDDDGIYL
CQMKDKGRSIAEVSVRGVIVKRLPRKLDVMEGENAVFCVETRDVVEGSCWSRDGLQLRES
PRTVLKSFSRTHLLVLVHVTRQDAGIISFTVGESQTSSQLRVKCVKHDPPSAPVAAEMSV
VETNTALLTWCPAPDSHLRPASHYLLERREAAGGEWVQCLATDLPSCVRVLGDSVPREAD
YCFRISAANKHGRSSPVEFPGSVHLVSATGAQSDCAPAPAARLERGLQDTWVRDGEDAQF
SLELSAAVHGSWFLNGARLREEEDAGGRCSVQRHGMEHSLLIRGARLVDSGAQVTFVSGG
VRDSAILHVQAPQVRIAPVSEAERLRNVPAGMPVLLECQVSTPDAPVCWLKDGKAVPLDD
VIAVQAEGCVRRLLLRSACPSDSAVYTCDAGDDAVSFVVTVTEVPVRIISSNEEVPHAYV
VGQRVELWCQLSRPAVPVHWYKDGEEVEVGESLLLEQEGPQCKLVLPCAQTQDTGEFVCD
AGGDSAFYTITVAEEPVRIVSSNEGASHTYVAGQRVELWCQLSRPAAPVHWYKDGEEVEA
GESLMLEQEGLQCRLVLPCARPQDTGEFVCDAGGDSVFYTVTVAALKVCLTTVLEAEQLQ
ELPAGLPLVLECQASPAHAPVHWLKDSEAMVPAQVLAICSEGCSQGLHTAAAALSDSGVY
TCHARDDAASFRVTASRELPRGFLSSHGTHPAPHLSPAMSPAEAPVRIVSSNKEASHSYV
VGQRVELWCQLSRPVSPVRWYKDSEEVEVGESLVLEQEGLQYRLVLPCARMQDTGEFVCS
ASNASVSYSIFVAEPPVRILQPPQRSLELLVQAPGCVELRCELSAPDAPVHWFKDGLEVD
ETDNLLLLVEGAWRCLFIPKSSAEDAGEYICETKDEAVSFDVKVSEPPVRILQPCRPVPV
MTVSPGETVTLCCELSRADTPVFWAKEGVRLEAGGSLVLEEEGVYRRLLIPAAQAEHSGK
YTCDTANDTVTFTIQVLDSLVRILEKDVLLTHRCCQAMEDLVLEVHLSHSHGEVKWYKDG
EKLQDTGRVRLEEDGVRRSLVILGTTGKDAGEYLCDTGDDSIVFFITVEVPRVVEIIMEL
QSLTVLEGEDATFKCLVSPEDVAVTWQLNGQPVVPGERLLVSRRGQSHSLTLRQCQTGDA
GTVTANAEGLVSTARLNVQEAEVLFVRKLQDVVAEEQGDVCLEVEVSHKAAEVQWLKQGI
LLQPGSKYLLQESGCRRTLTICCLGPADRGTYRCESLHDRTQAKLHVEPRKVSIRTPLTD
METFEKETATFHLELSHPGVTGVWTRDGIRVKPSSTCRISATGCGHSLTLERLALEDSGT
ITFTADTLRCSAHLRVREPPVTMVRVPRDLGVPETGVASFECELSRPNAEVKWFKDGQEL
RPGPNCRIYSAGRRRILQLSRCELTDTGSYTCDAGDCQASAMLHVQGTVTQLPARQVHIV
QELQDVQVQEGDNAVFTCEVSHGDVKGEWFRDGEKIKVSSTVKIRQEGTRHFLLFCGVRP
EDKGFIRFTARTVTSEASLQVEALPIRIVKPLRDKTVLARHKATLECTVSHARGRVRWLR
GDTEIFAGDKYEICNLDCYRTLIIHRVGPEDEDSYTCDAFDDRSTARLLVEGS
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttcgggggagcccccaggttcctggcctatccacgtgccttcacggtccaa
agtggcaccaatgcagtcctgagctgccagatcatgggtgatccccagccaagcatcctc
tgggaaaaggacaagaataccatcgagccctcgggccgtttccatatggagtccaaaggg
gacctgtacagcctgctggtgtcctgtgccacccccgaggacagcggactctacgtctgt
agggccaagaatagtgttggcgagacttacactgccaccgtgctcagggtagagccagcg
gagccgcgagagggggagggatgctcaggcagtgtcgcacctgccttcctcattgccccc
tcgtccatgcgggtgtgccggggggaggacgtgatgttcacctgcagggtgtctgggcag
ccctgccctgtgctggagtgggagaaggatgggcacaagctctccgaactctttgagagc
agccactttgcagtggggcagaaaccagaggactggcacttcctgaagctgttcggtgcc
cggccccaggatgggggtgtgtatgtctgccgggcacgcagcggctcccaggaggccctg
gctgccgccgtgctcctggttgaaccccaggcactgttggatgggctccccaatggctcc
cctgcccacggccccgaggtactggcggagcggcagcggtggcggcggcacgcagcggga
cggcgcatggcaccggagacctgggtgcccaatggcgtcgtgccggccagggtgccaggg
gccaaggcatttgctgtgagcgcagggaagcatgccaagtttcgctgttatgttactggc
aagcccaagccagagattatctggcagaaagatggtgaacccctcgcccctggccgcagg
catctcatctacgaggaccgggagggctacttcatcctcaaggtgctgtactgcaaacct
caggaccaggggctatacatgtgcactgcttccaacactgctggccagaccctcagtgca
gtgcagctgcaggtgaaagagcaccggctgcggttccaggtacagctggcagacgtggag
gtagcagagcgggaggatgcagtgttggagtgccaggtgccactggagacgatccccacc
tcctggtacctggaggacagagagctgcagcccagccacaagtacgtgatggaggagcaa
ggggtggtgcggcgcctgaccatccgcgatgcccgcatcgatgacgatggcatctacctc
tgccagatgaaggacaaaggacgcagcattgccgaggtctctgtccgaggggtgattgtg
aagcggctgccacggaagctggatgtgatggagggggagaatgcagttttctgtgtggag
acacgggatgtggtagagggcagctgctggagccgggatgggctacagctgcgggagtca
ccccgcaccgtgcttaagagcttcagcaggacacacctcctggtgctggtgcacgtcacc
cgccaggacgcgggcatcatctccttcactgtcggggagtcacagacatcctcccagctc
cgagtcaagtgtgtgaagcacgaccctccgagtgcaccagtagcagctgagatgagcgtg
gtggagactaacacagctctgctgacttggtgtcctgcacctgactcccacctccgcccc
gccagccactacctgctggagcgtcgggaggcagcgggaggggagtgggtgcagtgcctt
gccaccgacctgcccagctgcgtgcgggtgctgggtgacagcgtgcctcgcgaggccgac
tactgtttccgcatctctgccgccaacaagcacggcaggagcagccctgtggagttccct
ggatctgtgcatctcgtcagtgccactggggctcagtccgactgtgctccagccccagca
gctcgtctggagaggggtctgcaggacacgtgggtgagggatggtgaggatgcacagttc
tccctggagctgtcagctgcagtgcatggatcctggttcctcaacggtgccaggctgcgt
gaggaggaggatgcaggcggccggtgcagtgtacagcgccatgggatggagcactcgctg
ctgatccgaggagcacgactggttgacagtggggcccaggtcacctttgtgtccggtggt
gtgcgggactcagctatcctgcatgtgcaagccccacaggtccgcattgccccagtgtct
gaggctgaacggctccgaaacgtgccagcagggatgcctgtgctgctagagtgccaggtg
tccaccccggatgcccctgtctgctggctgaaggacggcaaggccgtgcccctggatgac
gttatcgcggtgcaggcagaaggctgcgtgcggaggctgctgctccgctcagcgtgtccc
tcagactctgctgtgtacacctgtgacgctggggatgatgccgtgagctttgtggtgacc
gtgaccgaggtgccggtgaggatcatcagctccaatgaggaagtcccccacgcctacgtg
gtcggacagcgtgtggagctgtggtgccagctgtcccgcccagcagtcccagtgcactgg
tacaaggatggagaggaggtggaggtgggtgagagcctgctgctggagcaggaggggcca
cagtgcaagctggtgctgccctgcgctcagacacaggacacaggagagttcgtctgcgat
gctggtggggactctgccttctacaccatcactgtggcagaggagccggtgaggattgtc
agctccaacgagggggcctcccacacctatgtggccggacagcgtgtggagctgtggtgc
cagctgtcccgcccggcagccccagtgcactggtacaaggacggggaggaggtggaggca
ggtgagagcctgatgctggagcaggaggggctgcagtgccggctggtgctgccctgtgcc
cggccacaggacacaggggaatttgtctgcgacgctggtggggactctgtcttctacaca
gtcaccgtagcagccctgaaggtctgcctcaccacagtgctggaggcagagcagctccag
gagttgccagcagggctgcccttggtgttggagtgccaggcgtcccctgcacatgcccct
gtccactggctgaaggacagcgaggccatggtcccagcacaggtcctggccatctgctca
gagggatgctcccaggggcttcacactgctgcagctgcactgtctgactcaggggtgtac
acatgccatgccagggatgatgctgccagcttcagggtgactgcgagcagggagctgccc
aggggattcctgtcctcacatgggactcacccagcaccacacctgagccctgccatgtcc
ccagcagaggcaccagtgaggattgtcagttccaacaaggaggcctctcactcctacgtg
gtcgggcagcgcgtggagctgtggtgccagctgtcccgccccgtgtccccagtgcgctgg
tacaaggacagtgaagaagtggaggtgggcgagagcctggtgctggagcaggaagggctg
cagtaccgcctggtgctgccctgtgcccggatgcaagacacaggggagttcgtctgcagt
gccagcaatgcatctgtctcctactccatctttgtggcagagccaccagtgaggatcctg
cagcctccacagcgctctctggagctgctggttcaggcaccagggtgtgtggaactgcgg
tgcgagctctctgcgccggatgctcccgtgcactggttcaaggatgggctggaggtggac
gagaccgataacctgctgctgctggtcgagggggcctggcgctgcctcttcatccccaag
agcagtgcagaggatgcaggcgagtacatctgtgagaccaaggatgaggccgtctccttc
gatgtcaaggtgtcagagcctccggtgaggatcctgcagccctgcagacctgtccctgtc
atgacggtgtccccgggggagacggtgacactttgctgtgagttgtcccgtgcggataca
cctgtgttctgggcaaaggagggtgtcaggctcgaggctgggggcagcctggtcctggag
gaagagggtgtctatcgccggctgctcatccctgctgcccaagctgagcactctggaaaa
tacacctgtgacaccgccaatgacacagtgacattcaccatccaagtgttggattcgctg
gtcaggatcctggagaaggatgtcctgctgacccaccggtgttgccaggccatggaggac
ctggtgctggaggtgcacctctcgcacagccatggggaagtgaagtggtacaaggacggg
gagaagctgcaggacacggggcgtgtgaggctggaggaggacggggtgcgcagatccctt
gtgatcctgggcactacgggcaaggatgctggggagtatctctgtgacactggtgatgac
agtatcgtcttcttcatcactgtagaagtccccagggtggtggagatcatcatggagctg
caaagcctgacagtgctagagggggaggatgccaccttcaagtgcctggtatcccccgaa
gatgtggctgtgacgtggcagctgaatggccagcccgtggtccccggtgagcgcctgctg
gtgtcaaggcgtgggcagagccacagcctcaccctccggcagtgccagacaggtgatgca
ggcactgtgacagccaatgccgaggggctggtgagcacagctcggctgaatgtacaagag
gcagaggtgctgtttgtgcggaagctgcaggatgtggtggcagaggagcagggggacgtg
tgcctggaggtggaggtgagccacaaggctgccgaggtgcagtggctgaagcagggcatc
ctccttcagccgggcagcaagtacctgctgcaggagtcggggtgccggcgcaccctcacc
atctgctgccttggccctgccgaccgcggcacctaccgctgcgagagcctgcacgaccgc
acgcaggccaagcttcacgtggagccccggaaggtgtcaattcggacaccactgacagac
atggagacctttgagaaggagacagccacctttcaccttgaactgtctcaccctggcgtg
accggggtctggacacgggatggcatccgggtgaagcccagcagcacgtgccggatcagt
gccacaggctgcgggcacagcctgacactggagaggcttgcactggaagactcgggcacc
atcaccttcactgctgacactctgcgctgcagtgcccacctgcgtgtgcgggagcctcca
gtcaccatggtgagggtcccacgagacctgggagtcccagagacaggggtcgccagcttt
gagtgtgagctgtctcgccccaatgcagaggtgaaatggttcaaggacgggcaggagctg
cggccagggcccaactgccgcatctactcggcgggacggcgccgcatcctgcagctgagc
cgctgcgagctgaccgacaccggcagctacacctgcgatgcaggtgactgccaggcctct
gccatgctgcacgtccagggtacggtcacccagctcccagcccgccaggtccacatcgtg
caggagctgcaggacgtccaggtgcaggagggtgacaatgcagtcttcacctgcgaggtg
tcacatggggatgtgaagggcgagtggtttcgggacggggagaaaatcaaggtctccagc
acagtgaagatacggcaagaagggacccggcatttcctgctgttctgtggtgtgcgccct
gaggacaagggattcatccgcttcacagccaggacagtcacctcggaggccagtctgcag
gtggaagcactgccaatccggattgtgaagccactgcgggacaagacagtgcttgcaagg
cacaaggcgacactggagtgcaccgtgtcccacgcccggggccgggtgcgctggctccgt
ggggacaccgagatctttgccggtgacaagtatgagatctgcaatctggactgctaccgc
acactcatcattcaccgcgtgggccccgaggacgaggactcgtacacctgtgacgccttt
gatgaccgctccactgcccggctccttgtggaggggagctag
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