Lonchura striata (white-rumped munia): 110468516
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Entry
110468516 CDS
T05897
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110468516 (PKD2)
04040 Ion channels [BR:
lsr04040
]
110468516 (PKD2)
Cilium and associated proteins [BR:
lsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110468516 (PKD2)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110468516 (PKD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
YVC1_C
Fer4_24
EF-hand_1
EF-hand_7
CNNM
Pex19
Motif
Other DBs
NCBI-GeneID:
110468516
NCBI-ProteinID:
XP_021382188
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All DBs
Position
4:complement(10430571..10457119)
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AA seq
900 aa
AA seq
DB search
MAGGGGCRRGREQLELERLGQAARPGSRPPSPPLSACSRQAWSRDNPGFEPEEDAAAAAG
PVLEMDVEWGSRAASSLGSGAGPAAGGGRRARRGPAGRGGAEGPGRLPGPPDGAAPRRAA
WAKRLARRLRGLWGTRLMEESNTSREQYLKSILRELITYMVFLVVLCVLTYGTVSSSMYY
YTRVMSQLFLETPVSKTEKTDFKTLSTMDDFWKFTEGPLLDGLYWEMWYNNKTMAENKSF
IYYENLLLGVPRIRQLKVRNGSCSIPEDLREEIKDCYDVYSVANEDTAPFGLRNGTAWTY
TNEKDLNGSSHWGLIATYSGAGYYQDLSRTREVTALQIASLKKNLWLDRGTRATFIDFSV
YNANINLFCVIRLLVEFPATGGLVTSWHFQPVRLIHYISTFDFFLAACEMSFCLFVLYYM
VEEILEIHIHRLRYFRSVWNCLDILIIVLSVVAIGISIYRTSTVDMLLKKLLEDQNSFPN
FEPLAYWQMQFNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFAIMFFII
FLAYAQLAYLVFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRILGPIYFTTFVFF
MFFILLNMFLAIINDTFSEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTTVDDISE
SLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKERE
DLDLDRSSLPRPLSSRSFPRSLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRRVD
RMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGKLLDGVTEDERLGRGSETHREQMER
LVREELERWESDDVASQASHRLGTPLGLNGQPRSRNSRPSSSQSDGLDAGAPSGANNIHV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggcggcggctgccggcgcggccgggagcagctggagctggagcggctgggg
caggcggcgcggcccggctcccgcccgccgtcgccgccgctctccgcctgctcgcggcag
gcctggagccgggacaacccgggcttcgagcccgaggaggacgcggcggcggcggcgggg
ccggtgctggagatggacgtggagtggggcagccgagccgcgtcgtcgctgggcagcggc
gcggggccggcggcgggcggcgggcggcgggcgcggcgcggccccgcggggcgcggcggg
gccgaggggccgggccgcctcccggggccgcccgacggagccgcgccccgccgggccgcc
tgggccaagcgcctggcgcggagactgcgaggtctgtgggggacaagactcatggaagag
agcaacaccagcagagagcagtacttgaaaagtattttacgggagctgatcacatacatg
gttttccttgtggtcctgtgtgtcttgacttatggtacagtgagttccagtatgtactat
tatacaagggttatgtcacagctcttcctggaaacacctgtgtcaaaaacggagaaaact
gatttcaaaactttgtccacaatggatgacttctggaagttcacagaaggccctttgctg
gatggtctttactgggagatgtggtacaacaacaaaaccatggcagaaaacaaaagcttc
atttattatgagaacttgctcctaggagtgcctcgcattcggcagctgaaagtcagaaat
ggttcctgctccatacctgaagatttaagggaggaaatcaaagactgctatgatgtctat
tctgtagctaatgaagatactgctccttttggactccggaatggaactgcctggacgtac
accaatgagaaggatttgaatggcagcagccactggggcttgattgccacgtacagcggg
gctggttattaccaagacctctcaaggaccagagaagtgacagctctgcagattgctagc
ctgaagaagaacctgtggctagacagagggaccagagcaaccttcattgatttctctgtg
tacaatgcaaacatcaacctgttctgcgtgatcaggttgctagtagagtttccagctact
ggaggcctggttacatcttggcactttcagcctgtgcggctgattcattacatctccact
tttgatttttttctggcagcctgtgaaatgtccttctgtctttttgttctatattatatg
gtggaagagatcttagaaattcacattcatagactgcgctacttcagaagtgtttggaat
tgccttgatatccttatcattgtgctgtctgtagtagctataggaattagcatctatagg
acatcaactgttgatatgctcctgaagaagctgctggaagatcagaactcattccccaat
ttcgaacccttggcgtattggcaaatgcagtttaacaacattgctgcagtcactgtgttt
tttgtctggattaagcttttcaaatttgttaacttcaacagaacgatgagtcagttatcc
accacgatgtctcgctgtgtcaaggatgtaattggctttgccattatgttttttattatt
ttcttagcatatgctcagttggcctatcttgtctttggcactcaaattgatgacttcagc
actttccaggattgcatatttactcagttccgcatcattttgggagacttcaacttcaca
gaggttgaagaagctaatcgaattttgggacccatttatttcactacatttgtgttcttt
atgttcttcattcttttgaacatgtttttggcaattatcaatgataccttctcagaagtc
aaatcagatatggcacaacagaaggcagaaatggaattgtctgaccttatcaggaagggc
tacaacaaagccatgatcaaacttaaattgaagaaaactactgttgatgacatttcagaa
agtctgagacaaggtggaggaaaactcaattttgatgaactccggcaggatctcaaaggg
aaggggcacacagatgcagagattgaagcaatatttaccaaatatgatcaggatggggac
caggaattgacagaacatgaacatcagcagatgagagatgacctggagaaagagagggag
gatctggacctggataggagctctctaccacgtcctctgagcagccgcagcttcccccgg
agcttggatgactctgaggaggatgaggatgaagacagtggacacagctccaggaggagg
ggcagcagctctagtggggtttcctatgaagagttccaagtactcatgaggcgggtggat
cgcatggagcattccattggcagtatcgtctccaagatcgatgctgttatcgtgaagctg
gaagccatggagagggccaagctaaaaaggagagatgtgttgggaaagctgttagatgga
gtgacagaggatgagaggctgggccggggcagtgaaacgcacagggagcagatggagcgg
ctggtgcgagaggagctggagcgctgggagtcggacgacgtggcctcgcaagcgagccat
cggctgggaacacccctggggctgaacggccagccccgctccaggaactcccgcccctct
tcttcccagtctgatggccttgatgcaggagcgccaagcggggccaacaacatccacgtg
tag
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