KEGG   Lonchura striata (white-rumped munia): 110468547
Entry
110468547         CDS       T05897                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    110468547 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lsr01002]
    110468547 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lsr00536]
    110468547 (SHH)
Peptidases and inhibitors [BR:lsr01002]
 Cysteine peptidases
  Family C46: hedgehog family
   110468547 (SHH)
Glycosaminoglycan binding proteins [BR:lsr00536]
 Heparan sulfate / Heparin
  Morphogens
   110468547 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 VldE Ribosomal_S6e Vint
Other DBs
NCBI-GeneID: 110468547
NCBI-ProteinID: XP_021382242
UniProt: A0A218UU38
LinkDB
Position
2:complement(8504672..8514413)
AA seq 422 aa
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSQKLFYVIETRQPRARLLLTAAHLLFVAPQQNQSQAGGGRALFASRVRPG
QRVFVLGEGGRLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHSWAHW
AFAPFRLLQAVLAALGPSAAGSPVGEPAAPGIHWYSRLLYRIGSWVLDGDSLHPLGMMVS
SS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacggccatcactccgaggag
tcgctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtttactacgagtcc
aaagcgcacatccactgctccgtcaaagcagaaaactcagtggcggccaaatccgggggt
tgcttccccggctcggccacggtgcacctggagaaaggtgggaccaagctggtgaaggac
ctgaggcctggagacagggtgctggtggccgacacggagggccgcctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccagaagctcttctacgtgatcgagacg
cggcagccccgggcccggctgctgctgacggccgcccacctgctcttcgtggccccgcag
cagaaccagtcccaggcgggcggcggccgggcgctgttcgccagccgcgtgcggccgggc
cagcgcgtcttcgtgctgggcgagggcgggcggctgctgccggcggccgtgcaccgcgtg
tcgctgcgggaggaggcgtcgggcgcctacgcgccgctcaccgcccagggcaccatcctc
atcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagctgggcgcactgg
gccttcgctcccttccgcctgctgcaggccgtgctggccgcgctcggtccctccgcggcg
gggtcgcccgtgggagagcccgcggcccccggcatccactggtactcccggctcctctac
cgcatcggcagctgggtgctggatggcgactctctgcacccgctgggcatgatggtgtca
tccagctga

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