Lonchura striata (white-rumped munia): 110468573
Help
Entry
110468573 CDS
T05897
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110468573 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110468573 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsr04147
]
110468573 (VPS36)
Membrane trafficking [BR:
lsr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
110468573 (VPS36)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110468573 (VPS36)
Exosomal proteins of colorectal cancer cells
110468573 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
GRAM
BBL5_2nd
DUF1351
BBL5
DUF5847
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
110468573
NCBI-ProteinID:
XP_021382277
UniProt:
A0A218USV8
LinkDB
All DBs
Position
1:complement(54168155..54187604)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWESMPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTE
YHMQLAKQLAGILQTPLEEQGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLEPLKLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggcgagacgctggtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaattcgatagtggagtttta
ctgctgagcacacacagactgatctggagggaccagaagaatcatgagtgctgcattgct
gtacctctgtctcagatagtatttattgaagagcaagcagctgggataggaaagagtgct
aaaatagtggttcatcttcatcctgcttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcgtacatcaagctttctttcaaagagcatgggcagattgagttctacaga
cgattatcagaagaaatcacacaaaggagatgggagagcatgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagggctgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggagaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacaaggtgacatcactgaggatgagaccattaggttcaagtcctac
ctactcagtatgggtatagctaatccagttacgagggaaacgtatggatctggtacagag
taccacatgcaactggcaaagcaactggctggaatcctgcagacacccttagaggagcaa
ggggggatcatgtctctgactgaagtgtactgcctggtgaatcgtgctcgagggctagag
ttgctgtcaccagaagatttagtaaatgcttgtaaaatgctagaaccactgaaattgcca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacccaaagctaa
DBGET
integrated database retrieval system
