Lonchura striata (white-rumped munia): 110468587
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Entry
110468587 CDS
T05897
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110468587 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110468587 (GTF2B)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
110468587 (GTF2B)
Prokaryotic type
Archaeal type
TFB
110468587 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
110468587
NCBI-ProteinID:
XP_021382305
UniProt:
A0A218VEH1
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All DBs
Position
8:15502685..15525112
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AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgtttggatgtacttccgagggtgacttgcccaaatcatccagat
tccattttagtggaggactacagagctggtgatatgatttgttctgagtgtgggctagta
gtaggtgaccgggtcatagacgtggggtcggagtggagaacgttcagcaatgacaaagca
accaaagacccatctcgagttggggatacccagaatcctttgctcagtgatggtgacttg
agtacaatgattggcaagggcacaggtgcagcaagttttgatgaatttgggaattcaaag
taccaaaatcgcagaactatgagcagctctgatcgtgcgatgatgaatgcttttaaagaa
attacaaacatggcagacagaatcaacctccctagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcaaaagagcctgaaggggagaagtaatgatgctattgct
tctgcttgtctctacatagcctgtaggcaagagggtgttccaagaacatttaaagaaata
tgtgcagtgtccaggatttcaaagaaagaaataggccggtgttttaaacttatcttgaaa
gctctggaaaccagtgttgatttgattacaactggcgacttcatgtcacgattctgttct
aatttgggtcttcccaaacaagtacaaatggcagcaacacatattgcccgtaaagctgtg
gaattagacttggttcctgggagaagccctatctctgtagcagctgcagctatttacatg
gcgtcacaggcttcttcagagaaaaggacacaaaaagaaattggtgatattgctggtgtg
gctgatgttacaattagacagtcatacaggctgatctatcctcgagctccagatcttttc
ccagcagacttcaagtttgataccccagtagacaagctaccacagctgtga
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