Lonchura striata (white-rumped munia): 110468655
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Entry
110468655 CDS
T05897
Symbol
CARS1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110468655 (CARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110468655 (CARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110468655 (CARS1)
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
110468655 (CARS1)
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
110468655 (CARS1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110468655 (CARS1)
Prokaryotic type
110468655 (CARS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
DUF4484
Motif
Other DBs
NCBI-GeneID:
110468655
NCBI-ProteinID:
XP_021382421
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All DBs
Position
5:complement(47537632..47571715)
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AA seq
831 aa
AA seq
DB search
MAAAASAEHASSYSFILSISEEEARVEALNEYLSTRSYIQGFTFSHADVEVFRKFSGPPV
DQYIHVVRWYRHIEAIYDGSSEKNEPCILQTSKGKRVQPPWSPPEGTKHSRLCLYNSLTR
SKEVFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILRDYFKYDVFYCMNITD
IDDKIIKRARQNHLFERYRESKSTPDQLLEDIRTASELFSVKLNETTDPDKKQMLERIQN
AVKSAFDPLQEALQATLPAEEINRCHETLLEEAKDLLSDWLDTKFGSQVTDNSIFSKLPK
FWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVKKIVDNGYGYVSNGSVYFDTMKFDA
SEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKHSPNDFALWKSSKPGEPSWDSPW
GKGRPGWHIECSAMGGSVLGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHT
GHLTIAGCKMSKSLKNFITIKDALKKHTARQLRLAFLMHSWKDTLDYSNNTMESAIQYEK
FMNEFFLNVKDILRAPTDVTGQFQKWENQEVELNKNFYEKKAAIHEALCDNIDTRSALEE
MRSLVSQSNSYIAAKKSSRQMPNRLLLENISSYLTQMLKIFGAIESDDAIGFPVGGTSQN
TNIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPELGVRFEDHEGLPT
VVKLVDKDTLLKEREEKKKIEEEKKRKKEEAARKKQQQEAAKLEKMKIPPHEMFKLELDK
YSMFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLHKEYLQMVQNGSAN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccgccagcgccgagcacgcttccagctacagttttattctgagcattagt
gaagaggaagccagggtggaggctctgaacgagtacctgagcactcgtagttatatccag
gggttcacattttcacatgcagatgtggaggtgttcagaaagttttcggggccacctgtg
gaccagtatatccatgttgtccggtggtacagacacatagaagcaatctatgatggcagc
agtgaaaaaaatgagccttgtatacttcaaacaagtaaaggcaaacgtgtgcagcccccc
tggtctccccctgaagggacaaaacattccaggctctgcctctacaacagcctgactcgc
agtaaggaagtatttcagcctcagaatggaaaaaaggtcttgtggtattgctgtggtcca
acagtttatgatgcttctcacatgggacatgccaggtcttacatctcatttgatatcctg
agaagaatcttgagggattattttaaatatgatgttttctattgtatgaatattacagat
attgatgacaagatcatcaagagagcaagacaaaatcacctttttgaacgatatagagag
agcaaatcaacaccagatcagctactcgaagatattagaactgcctcagagctcttttca
gttaaactaaatgaaacaacagacccagataagaagcaaatgttggaaagaattcaaaat
gcagtgaagtctgcttttgaccctctacaagaagctctccaagcaacgctccctgctgaa
gagatcaacagatgtcatgagacactgttggaagaagccaaagatttgctgtctgactgg
ttggacacaaaatttggcagtcaggtgactgacaattccatattctcaaagctccccaaa
ttctgggaagcggaatttcataaagatatggaagcactcaacgttttacctccagatgtt
ttaacgcgggttagtgaatatgtgccagaaattgtggattttgtgaagaagattgtggat
aatggttatgggtatgtgtccaatggatctgtatactttgatactatgaaatttgatgcc
agtgaaaaacactcctatgctaagttggtgcctgaagctgtaggtgatcagaaagctctt
caagaaggtgaaggtgacctgagcatctcagctgatcgtttaagtgagaagcattctcca
aatgattttgctttatggaagtcctccaagccaggagagccctcatgggactctccatgg
ggaaagggtcgtccaggttggcacattgaatgttctgccatgggtggatccgttctagga
gagtcgatggacattcatggaggaggctttgatcttcgatttcctcaccatgacaatgaa
ctggcccagtctgaggcatattttgaaaatgatcactgggttcggtattttctgcatact
ggtcacttaacaattgctggctgtaaaatgtccaaatctttgaagaatttcattaccata
aaagatgcactgaagaaacacacagcacgacagttacggctggctttcctcatgcactct
tggaaggatacactggattattcaaataataccatggagtcagctattcaatatgagaag
tttatgaatgagttctttttgaatgtgaaggatattcttcgagctcccactgatgtgaca
ggccagtttcagaaatgggaaaatcaagaagtagagctgaacaaaaatttttatgagaag
aaagcagcaattcatgaagcactatgtgacaatattgacacccgctctgccttagaggaa
atgcggtctttagtcagccagagtaactcctatattgctgcaaagaaatcttccagacag
atgccaaacagacttcttttggaaaacatcagctcctatctcactcaaatgctaaagatt
tttggtgccatagaaagtgatgatgcaattggttttcctgttggagggactagtcaaaac
acaaatattgaatctacagtgatgccatacctccaagttctttctgagttcagagaagga
gtgcgacaaatcgccagagaaaagaaagtaactgaagtgctgcagttgagtgatgctctt
cgggatgacatcctgcctgaacttggagttcgatttgaagatcatgaaggacttccaact
gtggttaaattagtggataaggacacattgttgaaagaaagagaagaaaagaaaaagata
gaagaagagaaaaaaaggaagaaagaagaagcagccaggaaaaaacaacagcaggaagca
gcaaaactggaaaaaatgaagattccaccacatgaaatgtttaaattggaacttgacaaa
tattccatgtttgatgaaaatggatttcccacccatgatacagaaggcaaggaacttagc
aaaggacaaattaagaagctaaagaaactttatgaaacccaagaaaagctacacaaggag
tatctacaaatggttcagaatggaagtgcaaattga
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