KEGG   Lonchura striata (white-rumped munia): 110468686
Entry
110468686         CDS       T05897                                 
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1
  KO
K04648  dynactin 1
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04814  Motor proteins
lsr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    110468686 (DCTN1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110468686 (DCTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lsr04131]
    110468686 (DCTN1)
   03036 Chromosome and associated proteins [BR:lsr03036]
    110468686 (DCTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lsr04812]
    110468686 (DCTN1)
Membrane trafficking [BR:lsr04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    110468686 (DCTN1)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     110468686 (DCTN1)
Cytoskeleton proteins [BR:lsr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     110468686 (DCTN1)
SSDB
Motif
Pfam: Dynactin CAP_GLY
Other DBs
NCBI-GeneID: 110468686
NCBI-ProteinID: XP_031360459
LinkDB
Position
4:69889607..69937823
AA seq 1257 aa
MSSEGGTKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRR
YFTCEENHGIFVRQSQIQVFEDGADTTSPETPESAAMKVPKRDSLDATKASKLRGAKPKK
APATRKSTARRPKPTRTPTSSASGGTAGPSGSASASGGEMSSSEPGTPAQTPLVAPVIPT
PSLGSPGAPPVPSPTKEEENLRAQVRDLEEKLETLKIKRNEDKVKLKELEKYKIQLEQVQ
EWKSKMQEQQADLQKRLKEAKREAKDALEAKERYMEEMADTADAIEMATLDKEMAEERAE
SLQQEVDSLKEKVEYLTMDLEILKHEIEEKGSDGAASSYQVKQLEEQNARLKEALVRMRD
LSASEKQEHVKLQKQMEKKNTELESLRQQREKLQEEVKQAEKTVDELKEQVDAALGAEEM
VETLTERNLDLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMATARVREA
EKRVEAAQETVADYQQTIKKYRELTAHLQDVNRELMSQQEASAEKQQQPPPEMFDFKIKF
AETKAHAKAIEMELRQMEVQQANRHVSLLTSFMPDSFLRHGGDHDCVLVLLLIPRLICKA
ELISKQAQERFELSESCAERAGLRGAPGEQLSFAAGLVYSLSLLQATLHKYEQALNRCSV
EVYKKVGSLYPEMSVHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLADQA
EDCTLQLADHIKFTQSALDCMGVEVCRLRAFLQAGQEAADLAILLKDLETSCSDIRQFCK
KIRRRMPGTDAPGIPAALGFGAQVSDTLLECRKHLTWVVAVLQEVAAAGAQLIAPLAENE
GLPAPRLEELAFKVSEQIYGSQGINPYECLRQSCSILMATMNKMATAMQEGEYDADRPQS
KPTPPAELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEK
KLDSASKDADDRVEKIQTKLDETQTLLKKKEKEFEETMDALQADIDQLESEKVELKQRLN
NQSKRTIEGLRGVPASGVASIVSGIAGEEQQRGGGAGQVPGGGSGPVQVKDSPLLLQQID
ALQLSLKHLKNENNLLKGAQLRMELASLAPLQVPRVARPPEGLPTQSLYRKTTQLLETLY
QLSANAKVLDVRQSKSTRSSSARLLEQTARLCALKNSIDALKDDTLREMVQQQPGAGVST
TFGTFPSSSFLKAKQEQARGPALCGRVTIPCAPGHGQAHRVLLTPDLLQHLRQHFVA
NT seq 3774 nt   +upstreamnt  +downstreamnt
atgagctccgagggtggcaccaagcccctcaaggtgggctcccgcgtggaggtcatcggc
aagggccaccgcggcaccgtggcctacgtgggggccaccctgttcgccaccggcaaatgg
gtcggggtcatcctggacgaggccaagggcaagaacgacggcacggtgcagggcaggagg
tacttcacctgcgaggagaaccacggcatcttcgtcaggcagtcccagatccaggtgttt
gaggatggagcggacacaacatccccagaaaccccggaatctgctgccatgaaggtccct
aagagagattccctcgatgccaccaaggccagcaaactgcgcggagccaagcccaaaaag
gccccggccacacgcaagagcaccgcccgccgacccaagcccacccggacccccacatcg
tcggcgtccggcggcaccgccgggccctcgggctcggcctcggcgtccggcggggagatg
agcagcagcgagcccggcacgcccgcccagaccccgctggtggcccccgtcatccccacg
ccctccctcggctccccgggggcacctcccgtcccctcgcccaccaaggaggaagagaat
ctccgtgctcaggtcagggaccttgaggagaagctggagacactgaaaatcaagaggaat
gaggacaaggtgaagctcaaggagctggagaagtacaagatccagctggagcaggtgcag
gaatggaagagcaaaatgcaggagcagcaggctgacctccagaagcgcctgaaggaggcc
aagagggaagccaaggatgccctggaggccaaggaaaggtacatggaggagatggcggac
acggcggacgccatcgagatggccacgctggacaaggagatggctgaggagcgggcagag
tccctgcagcaggaggtggattccctcaaggagaaggtggaatacctcaccatggacctg
gagatcctcaagcacgagattgaggagaaaggctccgatggagcagcatccagctaccag
gtcaaacagctggaggagcagaatgccaggctcaaggaggctctggtcaggatgagggat
ttgtctgcctcggagaagcaggagcacgtgaagctccagaagcagatggagaagaagaac
acggagctggagtcgctgcggcagcagcgggagaagctgcaggaggaggtgaagcaggcg
gagaagacggtggatgagctcaaggagcaggtggacgcagcgctgggtgctgaggagatg
gtggagactctgaccgagagaaacctggatctggaggagaaggtccgggagctgcgggag
accgtcggggacctggaagccatgaacgagatgaacgatgagctgcaggagaacgcccgg
gagacggagctggagctgcgggagcagctggacatggccacggcgcgcgtgcgcgaggcc
gagaagcgcgtggaggccgcgcaggagaccgtggccgactaccagcagaccatcaaaaag
taccgcgagctcacggctcacctgcaggatgtgaaccgggagctgatgagccagcaggaa
gcatctgcggagaagcagcagcagccgccccccgagatgttcgacttcaagatcaaattt
gcagagacgaaagcccacgccaaggccatcgagatggagctgcggcagatggaagtgcag
caggccaaccgccacgtgtccctcctcacctccttcatgcccgacagcttcctgcggcac
ggcggcgaccacgactgcgtcctggtgctcctgctcatcccacgcctcatctgcaaggcc
gagctgatcagcaaacaggcgcaggagaggttcgagctgagcgagagctgcgcggagcgg
gcggggctgcgcggagctcccggggagcagctcagcttcgccgccggcctcgtctattcc
ctgagcctgctccaggccactctccacaaatacgagcaggccctgaaccgctgcagtgtg
gaggtgtacaagaaggtggggagcctgtaccccgagatgagcgtccacgagcgctccctg
gacttcctgatcgagctgctccacaaggaccagctggacgagaccgtcaacgtggagccg
ctcaccaaagccatcaagtactaccagcacctgtacagcatccacctggctgaccaggct
gaggactgcaccctgcagctggccgaccacatcaagttcacccagagtgccttggactgc
atgggggtggaggtgtgccggctgcgggccttcctccaggccgggcaggaggcggccgac
ctggccatcctgctcaaggacctggagacgtcctgcagcgacatccgccagttctgcaag
aagatccggcgccgcatgccgggcacggacgcgccgggaattccggcggccctgggcttc
ggagcgcaggtgtcggacacgctgctggagtgccggaagcacctgacgtgggtggtggcc
gtgctgcaggaggtggcggcggccggggcgcagctgatcgcgccgctggccgagaacgag
gggctgccggccccgcgcctcgaggagctggccttcaaagtcagcgagcagatttatggc
tcccagggcatcaacccctacgagtgcctgcgccagtcctgcagcatcctcatggccacc
atgaacaagatggccacggccatgcaggagggcgagtacgacgccgaccgcccgcagagc
aagcccacgccgccagcagagctccgggcggctgcgctccgggcggagatcacggatgcg
gagggtctggggctgaagctggaggacagggagacggtcatcaaggagctgaagaagtcc
ctcaagatcaagggcgaggagctcagcgaggccaacgtgcggctcagcctgctggagaag
aagctggacagcgcctccaaggacgccgatgaccgcgtggaaaagatccagaccaagctg
gatgagacccagaccctgctcaaaaagaaggagaaggagtttgaggagaccatggacgct
ctccaggctgacattgaccagctggagtcggagaaggtggagctgaagcagcgcctgaac
aaccagtccaagagaaccatcgaggggctgcggggcgtgccggcctcgggcgtggcctcc
atcgtgtcgggcattgctggagaggaacagcagcgaggcggcggtgccgggcaggtgccg
ggaggcggctccggccccgtgcaggtgaaggattcgccgctgctgctgcagcagatcgac
gccctgcagctctccctgaagcacctcaagaacgagaacaacctgctcaagggtgcccag
ctgaggatggagctggccagcctggccccgctgcaggtgccccgcgtggcgcggccgccc
gaggggctgcccacgcagagcctctaccgcaagaccacgcagctcctggagaccctctac
cagctcagcgccaacgccaaggtgctggacgtgaggcagagcaaatccacgaggagctcg
tcggcgcggctgctggagcagacagcccggctctgcgccctcaagaactccatcgacgcc
ctgaaggacgacacgctgcgggagatggttcagcagcagccgggcgccggcgtctccacc
accttcggcaccttcccgtcctcttccttcctgaaggcgaagcaggagcaggcgcggggc
ccggcgctgtgcgggcgggtgacgatcccgtgcgcgccggggcacggccaggcccaccgg
gtgctgctcacccccgacctgctccagcacctccgccagcacttcgtcgcctga

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