Lonchura striata (white-rumped munia): 110468717
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Entry
110468717 CDS
T05897
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110468717 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lsr04090
]
110468717 (SIGLEC1)
04091 Lectins [BR:
lsr04091
]
110468717 (SIGLEC1)
CD molecules [BR:
lsr04090
]
Proteins
110468717 (SIGLEC1)
Lectins [BR:
lsr04091
]
I-type lectins (Siglecs)
110468717 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
C1-set
Izumo-Ig
C2-set_2
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
110468717
NCBI-ProteinID:
XP_031360505
LinkDB
All DBs
Position
4:complement(70198985..70228800)
Genome browser
AA seq
1626 aa
AA seq
DB search
MPPLPRWHCRSRHHRQGCDPASPVSPSSATMRLPRCLVLLASLVPPALGSWGVSYPESLQ
ASGGSCLVVPCTFSYPADVTTADGIVAIWYKDYDGQRTLVFHSATPQDVDPHFGGRAQLL
GDPMARNCTLLLQGVTPGDSGLYRFRFEIINGDRWSASRDVTLSVSEDLERPSVTGSDEQ
TEGQRSTLECSTPYVCPRGDTVLRWEGYDPQVSEVSSHVQLDTSGVSHQVTLTSSFTWKD
HSKKLLCEISDGSKRASTEVVLRVRHAPKDTQALLSPSSGNIGVGDTVTLSCQVGSSHPP
VSGYRWYKDGVAVATERVLALRGVRREDHGRYHCEAQNALGTSVSPPVTLHVFSAEISAS
PAAEVREGTATTLSCDVPGREGHPEELTYTWYKNGAWLKEGPAHTLLFPAVAAADAGYYS
CQVTNSQGSDTAQAISLSVTYPPRIPTLTLFQETQGGRLVIVHCTVDSHPPATLAIGRDG
TVLATSGAQVALGQRLGITASRNSLRLEIRDAGPRDGGKYGCTATNVHGNASATKVLVTR
AAGLLVQPSAEVTEGTAVTLTCVGTGDTEEEPLYTWYRNGRRLQESSFPTLEFPSVRGDD
AGAFQCQVRGRNGSDTSEAVPLRVLYPPRQPVLSSFLQSQGGRLGIIQCSVESDPESNLT
LRRGDDAIACTQGCPQATSPRVLVTRSYNSLKVEIRDVVVEDEGIYVCQAGNSQGSASAT
VDFKADTANVTVSPSRHVLEGDNATLTCHLSSGSMAVPNVTWYHNGQQISTGSATSLELR
PVRSGDTGLYRCQASTASGSRSSPDVLLDVLYPPRDPLLAAFLEAEQGSLAIFQCSVASN
PPARLALLRDQELVATSAGGSSPRVSVSAVPNSLRVEMREVTPADDGSYRCTAANAHGSA
ERRLYLRVQAARVLISPSSEVLEGDNVSLMCQVAGEPPGDTVYSWYKDSKWLQEGPDSVL
VLSPATSAATGLYHCRARGSAGTSVSPAVTLRVCLATNAHGNASAAGNFSGGAARVWIWP
SPDVREGDTATVTCAVAGGDRDVLSYTWYRNQVWLGTGSSQNLTFPGVTTSDAGSYQCSV
RTPARNHSATPATLNVLYPPRNLRLQSFVESSQGTATILLCAVDSHPPAQLTLLKGGHPV
ASSPPRGGDTPRQSIRASPSPNALRLEFREASEEDEGEYECQARSALGDTHASLTLRVQA
TRVLVRPSAEVAEGTEVTLTCQAPRAQPGTLYTWFKNGRWATEGPEPSLGLRGHRSDAGL
YGCRAGRGPRATPVGLAVLYAPQEPSFVALVEPRGGRQAVLLCSADGVPPPDISVSRGQG
HPPLATSHGSPDPRFEVRATPTSLRVAMAGLEPGDAGLYLCSATNSRGSATAALRLEVPG
VTLAVEPSQEVLEGTRATMSCSATAWGDKGVNYTWYRDGRWLWEGPSGSFVLGRVSSADA
GSYRCQASGTWGTATSVPLSLSVLYPPRAISVSTFLENQNGRGAIVLCTAQSHPPSWLAL
HHRGHLLATSLSPAVTPGVRATPSHNALRVELVAAGTGAGGRYVCVATNALGNATASADL
DVHTLSHLWTFRVLSGLLVAIVAIAIVALLAVKVWPRIRKFRSWSRAEDTLELRSKQDLP
QMDGAS
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgctcccgaggtggcactgccggagccgccaccaccgccagggttgtgacccc
gcgtccccggtgtcccccagcagtgccaccatgcgcctgccccgctgcctcgtgctcctg
gccagcctcgtcccgccagccctcggctcctggggggtctcctaccccgagtcgctgcag
gccagtggtgggtcctgcctggttgtcccctgcaccttcagctaccccgcggatgtgaca
accgccgacggcatcgtggccatctggtacaaggactacgacggccagcggacgttggtg
ttccactccgccacgccccaggatgtggatccccattttgggggtcgtgcccagctcctg
ggggaccccatggcccggaattgcaccctgctgctgcagggggtgacgccgggggacagt
ggcctctacaggttccgcttcgagatcatcaacggcgaccgctggtcggcatcgcgggat
gtgaccctgagcgtttcggaggatctggagcgtcccagtgtcaccggcagcgacgagcag
accgagggacaaaggtccaccttggagtgctccacgccctacgtttgtcccaggggtgac
accgtcctgcgctgggagggctacgaccctcaggtgtccgaagtgtccagccacgtccag
ctggacaccagcggggtcagccaccaggtgaccctgaccagctccttcacctggaaggac
cattccaagaagctgctctgcgagatttccgacggatccaagcgggcgagcacggaggtg
gtgctgcgggtcaggcacgcccccaaggacacacaggcgttgctgagcccttcctcgggg
aacatcggcgtgggtgacacggtgaccctgagctgccaggtcggcagcagccaccccccg
gtctcgggctaccgctggtacaaggacggggtggccgtggccaccgagcgggtgctggcc
ctgcgcggggtgcgccgtgaggaccacgggcggtaccactgcgaggcccagaacgccctc
ggcaccagcgtgtcacctcctgtcaccctccacgtgttctccgcagagatctcggccagc
cccgcggccgaggtgcgcgaggggacagccaccaccttgtcctgcgacgtgcccgggcgg
gagggacatcccgaggagctgacctacacctggtacaagaacggcgcctggctcaaggag
ggcccggcccacaccctcctcttccccgcggtggccgccgctgacgccggctactactcc
tgccaagtgaccaacagccagggcagcgacacggcccaggccatcagcctcagcgtgacg
tatccaccccgaattcccaccctcacgctcttccaggagacccagggtggccggctggtc
attgtccactgcactgtggacagccaccctccggccaccttggccatcggccgcgatggc
accgtgctggccaccagcggggcgcaggtggccctgggccagcgcctcggtatcaccgcc
tcccgcaattccctgcggctggaaatccgggatgcaggaccccgggacggcgggaagtac
ggctgcaccgccaccaacgtccacggcaacgccagcgccaccaaggtcctggtgacccgc
gctgcagggctcctggtccagccctcggcggaggtgacggaggggaccgcggtcaccctg
acctgcgtggggacaggggacacggaggaggagccgctctacacctggtacaggaacggc
cggaggctccaggagagctcattcccgaccttggaattcccgtccgtccgcggggacgac
gccggcgccttccagtgccaggtccggggcaggaacggcagcgacacgtcagaggctgtc
ccgctccgagtgctctaccccccgaggcagccggtgctgagctcgttcctgcagagccag
ggtggacgcctgggcatcatccagtgctccgtagagagcgatcccgagtccaacctcacc
ctccggagaggggacgatgccatcgcctgcacccagggctgtccccaagccaccagcccc
agagtcctcgtcaccaggtcctacaacagcctgaaggtggaaatccgggacgtggtggtg
gaggatgaggggatttacgtgtgccaggctgggaattcccaaggaagcgccagcgccact
gtggatttcaaggcggacactgccaatgtcaccgtgtccccctcccgccacgtgctggag
ggtgacaatgccaccctcacctgtcacctgagcagcggctccatggctgtccccaatgtc
acctggtaccacaacgggcagcagatctccacgggctcggccacgtcgctggagctgcgg
ccggtgcggagcggggacaccgggctgtaccggtgccaggccagcaccgccagtggcagc
cggagctctcccgacgtcctcctggacgtgctctacccccctcgggaccctctcctggcg
gctttcctggaggccgagcagggctccctggccatcttccagtgctccgtggccagcaac
cccccggcccggctggccctgctccgcgaccaggagctggtggccaccagcgccggcggg
agcagcccgcgggtcagcgtctccgctgtccccaactcgctgcgggtggagatgcgggag
gtgacgccagccgacgacggcagctaccggtgcacggccgccaacgcgcacggctccgcg
gagcgacggctctacctgcgcgtgcaagccgcccgagtcctgatctcaccgtcctcggag
gtgctggaaggtgacaacgtgtccctgatgtgccaggtggccggagagccaccgggtgac
accgtctactcctggtacaaggacagcaagtggctccaggagggtcccgacagcgtcctc
gtgctgtcccctgccaccagcgctgccaccgggctctaccactgccgggcccggggctcc
gcggggaccagcgtgtcccccgctgtcaccttgcgcgtctgcttggccaccaacgcccac
ggcaacgccagcgccgccgggaacttctccggaggagccgcccgggtctggatctggccg
tccccagacgtgcgggaaggggacactgccaccgtcacctgcgcggtggcaggaggggac
cgggacgtgctgagctacacctggtaccggaaccaggtgtggctgggcaccggctcttcc
caaaatctcaccttccccggggtcaccacctccgacgccggctcctaccagtgctccgta
cggactccggcccggaaccacagtgccactcctgccaccctcaacgtcctctaccccccc
aggaacctacggctgcaatccttcgtggagagcagccaggggacggccaccatcctgctg
tgcgccgtggacagccaccccccggcccagctcaccctgctcaaggggggacacccggtg
gcctccagcccccccagaggaggtgacaccccccggcagagcatccgcgcgtccccctct
cccaacgcactgcgcttggaattccgggaagcctccgaggaggatgagggtgaatacgag
tgccaggcacggagcgccctcggcgacacccacgcgtccctcacgctccgggtgcaagcc
accagggtgctggtgcgaccctcggccgaggtggcggaggggacagaggtgaccctgacg
tgccaggcccctcgcgcgcagccggggaccctctacacgtggttcaagaacgggcggtgg
gcgacagagggacccgagccctcgctggggctccgtggccaccgctccgacgcggggctc
tacggctgccgggcgggccgggggccccgcgccacccccgtgggcctcgccgtgctctat
gccccgcaggagcccagcttcgtggcgctggtggagccccgcggggggcgacaggcggtg
ctgctctgctccgccgacggtgtccccccgccggacatctccgtgagcaggggacaaggc
cacccacccctggccaccagccacggctcccctgacccccgcttcgaggtccgggccacc
cccacgtcgctgcgggtggcgatggcggggctggagcccggcgacgcggggctctacctg
tgctcggccaccaacagccgcggctcggccaccgcggccctgcggctggaagtgccaggg
gtgacgctggcggtggagccctcgcaagaagtcctcgagggcacccgggccaccatgagc
tgctcggccaccgcgtggggggacaaaggtgtcaactacacgtggtaccgcgacgggcgg
tggctttgggagggaccgagcggctccttcgtcctcggccgcgtgtccagcgccgacgcc
ggctcctaccggtgccaggccagcgggacatggggcacggccacctctgtccccctcagc
ctcagtgtcctctaccctcctcgggccatctcggtgagcaccttcctggagaaccagaac
gggcgcggggccatcgtgctgtgcacagcccagagccacccgccctcctggctggccctg
caccaccgtggccacctcctggccaccagcctgtcccccgctgtcacccccggggtccgg
gccaccccctcacacaacgccctgcgcgtggagctggtggccgcagggacgggggccggg
ggacgctacgtctgcgtggccaccaacgcgctgggcaacgccacggccagcgctgacctc
gacgtccacactctcagccacctgtggaccttccgcgtcctgtccgggctcctcgtggcc
atcgtggccatcgccatcgtggccctgctggccgtgaaggtgtggcccaggatcaggaag
ttccggagctggtcccgtgccgaggacaccctggagctgaggagcaaacaggacctgcca
cagatggatggagcatcctga
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