Lonchura striata (white-rumped munia): 110468793 Help Entry 110468793         CDS       T05897                                  Name (RefSeq) cadherin-1   KO K05689   cadherin 1, type 1, E-cadherin Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr04371   Apelin signaling pathway lsr04514   Cell adhesion molecules lsr04520   Adherens junction lsr05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:lsr00001]  09130 Environmental Information Processing   09132 Signal transduction    04371 Apelin signaling pathway     110468793   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     110468793  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     110468793  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     110468793  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:lsr03036]     110468793   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:lsr04515]     110468793    04090 CD molecules [BR:lsr04090]     110468793 Chromosome and associated proteins [BR:lsr03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     110468793 Cell adhesion molecules [BR:lsr04515]  Cadherins   Major cadherins    110468793 CD molecules [BR:lsr04090]  Proteins   110468793 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_4 TM_ErbB1 Motif Other DBs NCBI-GeneID:  110468793 NCBI-ProteinID:  XP_031361736 LinkDB All DBs Position 11:complement(996574..1009195) Genome browser AA seq 1606 aa AA seqDB search MKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPE GALPGTSIMQVTATDADDAVETYNGVIAYSILSQEPREPHPQMFTVNRATGTLSVIASGL DRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKMYEAAVPENAAGQEV ARLAVTDLDEPGTPAWRAVYSILRGNDGGAFAITTDPATNEGILRTAKGLDYEAKQQFVL HVAVANEVPFVVKLPMATATVTVTVEDVNEAPEFVPPVQLATVSEDVPPGQTLTACMAQD PDKAQGQTIKYLVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYIAVLLAVDDGSP PATGTGTLLLTLLDVNDNGPEAEPRDITVCQRSPQPQLLTVTDRDLPPNTGPFRAELTHG SGDSWAVEVGDTGDTVTLQLVAPLEPDTYSVYLRLLDQPGRAQVTIVTARVCACEGQAQG CPQRSQPVTALPFVLATLGALLALLLILLLLLLFMRRRKVTKEPLLLPEDDTRDNIFYYG EEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLK AADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELY GGGEEDDCTGNTGVRAGRDRLPSGRDGAVLGGADTCEEGSGGDRTHLRLRGGSARSLRHQ PAPAMGRRAGCSVPLCLLLLLLQSGQRLCQRAASCQPGFAAETFTLTVPRDGVAAGRALG RVNFVDCGEPRRAAFLPDDTRFKVSRDGIVSATRPLQLQQREITFAVHTWDTMGKKHSAK VTLRQRWHQHRHHERVQQDTVPDTLIFPEHGHGLRRHKRDWVIPPINCPENERGPFPKKL VQIKSNKDKETKVFYSITGQGADTIPAGVFIIERETGWLEVTKPLDREEKDKYVLYSHAV SANGQPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDAINV NNGIIGYSILSEEPKGAQRMFTINAEKGIISVIGTGLDRETTPNYTLIIQAADQEGTGLT NTATAIIKVTDANDNPPVFNPAMYEGLVDENQVGVLVIRLHVTDQDLPGSPAWRAVYRIQ SGDPQGDFEITTDPKTNDGLLKTAKGLDYETQNRYKLVVSVENEAPFTVALNPATANVLV VVTDVNEAPIFKPPVKQVEVMEDVPVGYQVTSYTAQDPDKDQRQKITYRMGSDPAGWLAI DSENGIVTAAQPLDRESAHAINSTYKAIILAIDNGSPNYATGTGTLILLLQDVNDNGPVP DPRSFDICNQQPEEQTLKIIDKDLPPNTHPFKAELMHGSGSNWTASVVQPDEVKLSMKKE LEPGEYSIFLKLLDAQGKEQITQVRAQVCSCEGPAKNCERRAFISGGMGVPAILGILGGI LALLILLLLLLLFARRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLD ARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEG SGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD NT seq 4821 nt NT seq  +upstreamnt  +downstreamnt atgaaagtaacgcagccgctggaccgcgagcacatcgacaagtaccacctcttctcccac gccgtgtctgagaacgggaagcccgtggaggagccgatggagatcatcgtgacagtgacg gaccagaatgacaacaagccccagttcacacaggaggtgttcaggggctctgtgccagag ggagctctgccaggcacctccatcatgcaggtgacagccacggatgcggacgatgcagtg gagacctacaatggtgtcattgcctactccatcctcagccaggagccacgggagccccat ccccaaatgttcactgtcaaccgggccactggcaccctcagcgtgattgccagcggcctc gaccgggagcgtgtgcgggagtacacactgaccgtgcaggcagctgacctggatggtgag ggactgaccaccacagcgctggctgtcatcgagatcgccgacgtcaatgacaatgccccc gagtttgaccccaaaatgtacgaggcggccgtgccggagaacgcggccgggcaggaggtg gcccggctggctgtcaccgacctggacgagcccggcacgccggcgtggcgagccgtctac tccatcctgcgcggcaacgacgggggtgcctttgccatcaccaccgatcccgccaccaac gagggcatcctccgcactgccaagggtctggactatgaggccaagcagcagttcgtgctc cacgtggcagtggccaacgaggtccccttcgtcgtgaagctgccgatggccactgctacg gtgactgtcactgtagaggatgtcaatgaggccccggagttcgtgccacccgtgcagctg gccacggtgtcagaggatgtgcccccggggcagaccctcacagcctgcatggcccaggac cctgacaaggcacagggccagacgatcaagtacctggtggggcacgacccggcgggctgg ctggccgtgcaccctgagaatggcctggtgaccgcacgggaccacctggaccgcgagtcc cccttcgtcaagaacagcacctacatagctgtgctgctggccgtggatgatggctcacca ccggccacgggcacgggcacgctactcctcaccctgctcgatgtgaacgacaacggcccc gaggcggagccacgggacatcacagtctgccagcgcagtccccagccccagctcctcacc gtcaccgaccgggacctgccccccaacaccggccccttccgcgccgagctcacccacggc tcgggggacagctgggctgtggaggtgggggacacaggtgacacagtgacactgcagctg gtggcaccgctggagccagacacctacagtgtgtacctgcggctgctggaccagccgggc agagcccaagtgaccattgtcaccgcacgggtctgcgcctgtgaggggcaggcacagggc tgtccccagaggtcccagcctgtcaccgccctgcccttcgtcctcgccaccctgggcgcg ctgctggccctgctgctcatcctgctgctgctgctgctcttcatgaggaggaggaaggtg acaaaggagccgctgctgctgcctgaagatgacacaagggacaacatcttctactacggg gaggaaggtggcggcgaggaggaccagaactatgacctgcggcagctgcaccgggggctg gacgcccggcccgaggtgatccgcaatgatgtggcccccccgctcatggcggccccccag taccggcctcgccccgccaaccccgacgagatcgggaacttcatcgacgagaacctgaag gcggccgacacggaccccacggcccccccctacgactcgctgctggtgttcgactacgag ggcagcggctcggaggccacctcgctcagctccctcaactcctccgcctccgacggcgac caggactacgactacctcaacgactggggcggccgcttccgcaagctggccgagctctac ggcggcggcgaggaggacgattgtaccgggaatacgggggtgcgggcggggagggaccgc ctcccgtcggggcgggacggggcggttctcggcggggccgacacctgcgaggagggatcg ggaggggaccggacgcacctgcgactccgcggcggcagcgcccgatccctccggcaccaa ccggcaccggctatggggcggcgggcgggctgctccgtccctctctgcctcctcttgctc ctgctccagagcgggcagcggctgtgccagcgagcagcgtcgtgccagcccggcttcgcc gccgagaccttcaccctgacggtgccgcgggacggcgtggcggcgggacgggcactggga cgggtgaactttgtggactgtggcgagccacgccgtgccgccttcctcccggatgacacg cgcttcaaggtgagcagggatggcattgtctctgccacccggcccctgcagctccagcag cgggagatcacctttgctgtgcacacctgggacaccatgggcaagaagcattcagccaag gtgaccctgcgccagcggtggcaccagcaccgacaccacgagcgggtgcagcaggacaca gtgccggacacgctgatcttcccggagcacggacacggcctccggcggcacaagagggat tgggtcatcccccccatcaactgccctgagaatgagcgggggcccttccccaagaagctg gtgcagatcaaatccaacaaggacaaggagaccaaggttttctacagcatcacggggcag ggagcggataccatccccgcgggtgtcttcatcatcgagcgggagacggggtggctggag gtgacaaaacccctggaccgggaggagaaggataaatacgtgctctactcccacgccgtg tcggccaacgggcagcccgtggaagaccccatggagatcatcatcaccgtcactgaccag aacgacaaccggcccgtcttcacccagcaagtctttgttggctacattgaggagaatgca aagccgggcacatctgtgatgaccgtgaacgctacggatgcagatgatgcgatcaatgtg aacaatggcatcatcggctactccatcctcagcgaggagcccaagggtgcacagcggatg ttcaccatcaatgccgagaagggcatcatcagtgtcattggcacaggactggaccgggag actactcccaactacacactgatcatccaggctgcagaccaggaaggcactggcctgacc aacactgccactgccatcatcaaagtcactgatgccaacgacaaccctcccgtcttcaac cctgccatgtacgaggggttagtggatgagaaccaggtgggggtgctggtgatccggctg catgtgacagaccaggacctgccaggctccccggcctggcgcgccgtctaccgcatccag agcggggacccgcagggcgacttcgagatcaccactgaccccaaaacgaacgatgggctc ctgaaaactgccaagggcctggattatgagacccagaaccggtacaagctcgtggtgtca gtggagaacgaggcccccttcaccgtggccctgaatcctgccacagccaatgtcctggtg gtggtcacggacgtgaatgaagccccgatcttcaaacccccggtcaagcaggtggaggtg atggaggatgtgccagtgggataccaggtcacctcctacacagcccaggaccccgacaag gaccagagacagaaaatcacgtatcgcatgggcagcgaccccgcggggtggttggccatt gactctgagaacggcatcgttacggcagcccagccactggaccgggagtcggcacatgcc atcaacagcacctacaaggccatcatcctggccatagacaacgggtcaccaaactatgcc accggcacggggacactgatcctcctgcttcaggatgtgaatgacaacgggcctgtgcca gatccccggagcttcgacatctgcaaccagcagcctgaggagcagacgctgaagatcatc gacaaggacctgccccccaacactcaccccttcaaggcagagctgatgcacggctctggc agcaactggactgccagtgtggtgcaaccagacgaggtgaagctgagcatgaagaaggag ctggagccaggcgagtacagcatcttcctgaagctgctggatgcgcagggcaaggagcag atcacacaggtgcgagcccaggtgtgcagctgtgaggggccagccaagaactgcgagcgg cgagcattcatctccggtggcatgggcgtgcccgccatcctgggcatcctggggggcatc ctggccctgctcatcctcctgctgctgctgctgctcttcgcaaggaggaggaaggtggtg aaggaaccactgctcccacctgaggatgacatgagggacaacgtgtaccactatgacgag gagggcggtggcgaggaggaccaggactacgacctgagccagctgcaccgggggctggac gcccggcccgaggtgatccgcaatgacgtggcccccccgctcatggcggccccccagtac cggcctcgccccgccaaccccgacgagatcgggaacttcatcgacgagaacctgaaggcg gccgacacggaccccacggcccccccctacgactcgctgctggtgttcgactacgagggc agcggctcggaggccacctcgctcagctccctcaactcctccgcctccgacggcgaccag gactacgactacctcaacgactggggcggccgcttccgcaagctggccgagctctacggc ggcggcgaggaggacgattag

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