Lonchura striata (white-rumped munia): 110468827
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Entry
110468827 CDS
T05897
Symbol
CDH15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04514
Cell adhesion molecule (CAM) interaction
lsr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110468827 (CDH15)
04519 Cadherin signaling
110468827 (CDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110468827 (CDH15)
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Major cadherins
110468827 (CDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Big_9
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
110468827
NCBI-ProteinID:
XP_021382665
LinkDB
All DBs
Position
11:complement(1318707..1324759)
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AA seq
778 aa
AA seq
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MGPPLLLACLLAPLCARGASPAQPGAAAPQAWRQHEAPRRVKRAWVIPPISVSENHKRIP
HLLVQIKSDKQQPGGVIYSIKGPGVDEEPLGIFSIDKFSGKVFLNAMLDREEHDRYRLRA
FALDLGGVTLEDPTDLEIIVVDQNDNRPLFRQDVFTGRVLEGAEPGTCVMTVDATDADDP
DTDNAALRYSILEQGAAGMFSINATTGEICTARPGLDRETMGVYNLTVQAADMSGDGLTT
TAVAVIYLEDINDNAPEFTKEEFSMEVEEQAAGVDVGKVFVHDKDLAGSPSWLAKFTILE
GDPEGAFAIRTDPHTNDGVLSVVKPLDHEVRDRFELTVSVQNERPLEPSAPASPRALATV
RVRVRDVNEAPVFRENPRRISVLEGTPPGTPITTYTASDPDTQQIQSLSYALLYDPAGWL
QLDPHAGTVRTKRELLHPSAFLQGGWYIALVLARDDAEPPLSATGTLSIEILEVNDHAPQ
LQPPAGVLCGRPGRGGTLLLGATDDDRPPHGAPFHFQLSPQHPQLARNWSIARFNVTHAV
LAVLAELPEGPYSLPLLLRDSGTPPREQQQQLNVSVCRCGRDGTCLHGALAAASAGAGIT
FGALTIILGSAILLLALAALGAARVRGRRRALRKGLLQRSRDDMRDNILNYDEQGGGEED
QDAYDINQLRHPELFSPRAKPPLRRDAPLSSGTPVAPRRLPSSPSDIEEFINEGLEAADS
DPSVPPYDTALIYDYEGSGSVASPLSSIVSSLTDEDQDYDYLSEWGPRFRRLADLYGH
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggccccccgctcctcctcgcctgcctgctcgcccctctctgcgctcggggtgccagc
ccagcccagccgggggctgcagccccccaggcctggcggcagcacgaggctccccggcgg
gtgaagagggcctgggtgatcccccccatcagtgtctcggagaaccacaagcgcatcccc
cacctcctggtgcagatcaagtcagacaagcagcagcccggcggggtgatctacagcatc
aaagggccgggggtggatgaggaacccctgggcatcttctccatcgacaagttcagcggg
aaggttttcctcaacgccatgctggaccgggaggagcacgaccgctaccggctgagagcc
ttcgcgctggacctgggcggggtcaccctggaggaccccactgacctggagatcatcgtg
gtggaccagaacgacaaccggccgctcttccggcaggacgtgttcaccggccgcgtgctg
gagggggctgagccagggacctgcgtgatgacggtggatgccacggacgccgacgacccc
gacacggataacgcggcgctgcgctattccatcctggagcagggcgctgccgggatgttc
agcatcaacgccaccaccggggagatctgcaccgcacggcccggcctcgaccgggagacc
atgggggtgtacaacctgacggtgcaggcggccgacatgtccggggacgggctgaccacc
acggccgtggccgtcatctacctggaggacatcaacgacaacgctcccgagttcaccaag
gaggagttctccatggaggtggaggagcaggcggccggcgtggacgtgggcaaggttttt
gtgcacgacaaggacctggcgggctcgcccagctggttggccaaattcaccatcctggag
ggcgaccccgagggcgccttcgccatccggaccgacccccacaccaacgacggcgtgctc
tccgtggtcaagccgctggaccacgaggtgcgggaccgcttcgagctgacggtgtcggtg
cagaacgagcggccgctggagccctcggcccccgccagcccccgggcgctggccacggtg
cgggtgcgggtgcgggacgtcaacgaggcgcccgtgttccgcgagaacccgcggcggatc
agcgtcctggaggggacacccccgggcacccccatcaccacctacaccgccagcgacccc
gacacgcagcagatccagagcctctcctacgcgctgctctacgaccccgcgggctggctg
cagctggaccctcacgccggcaccgtccgcaccaagcgggagctgctgcacccgtccgcc
ttcctgcagggcggctggtacatcgccctggtgctcgcccgcgacgacgccgagcccccg
ctctcggccaccggcaccctctccatcgagatcctggaggtgaacgaccacgctccgcag
ctgcagccgccggccggggtgctctgcgggcggccgggacgcggggggaccctgctcctg
ggggccaccgacgatgaccgacccccccatggagcccccttccacttccagctcagcccc
cagcacccccagctcgcccgcaactggagcatcgcccgcttcaatgtgacccacgccgtg
ctggccgtgctggcggagctgcccgaggggccgtactcgctcccgctgctgctgcgggac
tcggggacgccgccgcgggagcagcagcagcagctgaacgtctcggtgtgccgctgcggc
cgggacggcacctgcctgcacggggccctggccgcggccagcgccggggccggcatcacc
ttcggggcgctcacgatcatcctgggcagcgccatcctcctcctcgcgctggcggctctg
ggcgctgcgcgggtgcgcggccgccgccgggccctgcgcaaggggctcctgcagcgctcc
cgggacgacatgcgcgacaacatcctcaactacgacgagcagggcgggggcgaggaggac
caggacgcctacgacatcaaccagctccggcaccccgagctcttctccccccgggccaag
ccccccctgcgcagggacgccccgctcagctccgggacccccgtggccccccgcaggctg
cccagcagcccctccgacatcgaggaattcatcaacgaggggctggaggcggctgacagc
gaccccagcgtgcccccctatgacacggccctcatctacgactacgagggctcgggctcg
gtcgccagccccctcagctccatcgtgtccagcctgacggacgaggaccaggactacgac
tacctgagcgagtgggggccccgcttccgccgcctggccgacctctacgggcactag
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