Lonchura striata (white-rumped munia): 110468845
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Entry
110468845 CDS
T05897
Symbol
STXBP5
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110468845 (STXBP5)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110468845 (STXBP5)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110468845 (STXBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_Vps41
VPS8_N
Beta-prop_VPS8
WD40_like
Synaptobrevin
Beta-prop_DCAF12
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
110468845
NCBI-ProteinID:
XP_021382696
LinkDB
All DBs
Position
3:complement(47483832..47585936)
Genome browser
AA seq
1114 aa
AA seq
DB search
MRKFNIRKVLDGLTAVSAVASASSAAQQQQAGNRETEIQETLQSEHFQLCKTVRHGFPYQ
PSALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALAD
DTLHLWNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTHDEA
IHSVAWHHEGKQFICSHSDGTLTIWNVKSPTKPFQTITPHGKQLKDGKKPEPCKPILKVE
YKTTRAGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDF
QEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSV
GARQKRQGYSKKEWPISGGNWGVITQSYSEIIITGHADGSIKFWDASAITLQVLYKLKTA
KVFEKSRNKDDRPNTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVTTEV
IPMLEIRLLYEINDIETPDGEQVPPVPTPGTGSNPQSIVPQSHPSTSSSSSDGLRDNVPC
LKVKNSPLKQSPGYQIELVIQLVWVSGEPPQQITSLAINSAYGLVVFGNCNGIAMVDYLQ
KTVLLNLGTIELYGSNDPYRREPRSPRKARQPSGAGLCDINEGTVVPEDRCKSPTSAKMS
RKLSLPTELKPDLDVKDNSFSRSRSSSVTSIDKESREAISALHFCETFTRKADTSPSPCL
WVGTTLGTVLVIVLNLPPGGEQRLLQPVIVSPSGTILRLKGAILRMAFLDTTGSLVPPAH
ETWREHYEDKDEKEKTKKRRPVSVSPSSSQEISENQYAVICSEKQAKVISLPSQNCIYKQ
NITETSFVLRGDIVSLSNSICLACFCANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFC
FTDNGQALYLVSPTEIQRLTYSQETCENLQEMLGELFTLVETPEAPNRGFFKGLFGGGAQ
SLDREELFGESASGKASRSLAQHIPGPGGIEGVKGAASGVVGELARARLALDERGQKLGE
LEEKTAAMLYSADSFSKHAHEMMLKYKDKKWYQF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatttaacatcaggaaggtgctggacggcctgacggcggtctctgccgtcgct
tcggcgtcgtccgccgcgcagcagcagcaggcggggaaccgggagaccgaaatccaggag
acgctccagtccgagcacttccagctctgcaagacggtacgtcacggtttcccctatcaa
ccttcagccttggcatttgatccggttcagaaaatactggccattgggactcagactgga
gcactaaggctctttggtcggccaggagttgaatgctactgtcaacatgacagtggagct
gcagtaatccaacttcagttcctgattaatgagggagctcttgtgagtgccttggctgat
gacaccttacacctgtggaacttgcgccagaagaggccggctattcttcattcactcaaa
tttaaccgggaacggataacattttgtcacctgcctttccaaagcaaatggctatatgtg
ggcactgaaagaggaaacattcacattgtcaatgtggaatcatttactctctcaggctat
gtcatcatgtggaataaagccattgaactgtcatccaaatctcacccaggacctgttgtc
cacattagtgacaatccaatggatgaaggaaagcttctgattggctttgaatctgggacg
gtggtattatgggacctgaagtcaaagaaggcagattacagatatacacatgatgaggct
atccactctgtggcttggcatcatgaaggaaaacaattcatttgtagtcactcagatggt
accttgaccatatggaatgtaaaatctcctaccaaaccattccagacaatcactccacat
ggaaagcagctgaaggatggaaagaagccagaaccctgcaaacctatccttaaggtggaa
tataaaacaactagagctggggagcctttcatcattctctcaggaggcttgtcatatgac
actgtaggaagaagaccctgtttaacagtcatgcatgggaaaagtactgctgtgctagaa
atggattattctattgttgattttctaaccctgtgtgaaacaccttatcctaatgacttt
caggaaccgtatgctgtagttgttctcctagaaaaggacttagtactgattgaccttgca
caaaatgggtaccctatatttgagaatccctatcctttgactatacatgagtctccagtt
acctgttgtgaatattttgctgattgtccagtggatctcatacctgcactctattcagtt
ggtgctcgacagaaacgtcaaggttacagtaagaaggaatggcctatcagtggaggcaac
tggggtgtgatcactcagagctattcagagataattattacagggcatgctgatggatca
atcaagttttgggatgcatcagcaataacgctgcaagtactctataagctaaaaacagcc
aaagtatttgaaaaatcacggaataaagatgacaggccaaacacagatatagtagatgaa
gatccatatgctattcagatcatctcatggtgtccagaaagtagaatgctgtgcatagct
ggagtttctgcacatgtcattatttataggttcagcaagcaggaagtgacgacggaagtc
attccgatgctggaaatacgtctcctatatgaaataaatgatattgaaactccagacggt
gagcaggtgccacctgtaccaactccaggcacaggttccaatccccagtccattgttcct
cagtctcatccatctactagtagcagttcatctgatggacttcgtgataatgtcccatgt
ttaaaagttaaaaattctcctctcaagcagtctccaggctaccaaatcgagcttgttata
cagctggtgtgggtgagtggagaacctcctcaacagataaccagcttagccatcaactca
gcatatggcctagtagtttttggaaactgtaatggtattgccatggttgattacctccag
aagacagtgctcttaaatctaggcactattgaactgtatggctccaatgatccctaccgc
agggagccacgatctccccgaaaagctcggcaaccatctggagcaggtctttgtgatata
aatgaaggtacagtggtgccagaagaccgctgcaagtcacccacgtcagcaaagatgtcc
aggaagctaagtttgccaactgagttaaagcctgatttagatgtcaaagacaactctttc
agtcgatcccggagttctagtgtaactagcattgataaagagtcccgcgaggcaatatca
gctcttcacttttgtgagactttcacaagaaaggccgacacatcgccttccccatgcctg
tgggttgggaccacgctgggtacagtgcttgtcattgtactgaacttacccccaggagga
gagcaaagacttcttcagccagtaattgtttctcctagtggaaccatcctgaggctaaaa
ggggcaatcttgagaatggcttttttggacaccacaggatctttggtcccaccagcacat
gaaacctggagagaacactatgaagataaagatgaaaaagaaaaaacaaaaaagcgacga
ccagtttcagtgtccccttcttcctctcaggaaatcagtgaaaaccaatatgcagtgata
tgttcagaaaagcaagcaaaagttatctcactgccatcccagaactgtatttataagcaa
aatataacagagacttcttttgttcttcgtggagacatagtgtcattgagtaacagtatc
tgccttgcatgtttttgtgccaatggacatattatgacttttagtttgccaagtttaagg
ccattgttggatgtatattacctgccactcaccaatatgcggatagccagaacattctgc
ttcactgataatggacaagcactctatcttgtctcaccaactgaaatacagaggctcacc
tacagccaagaaacgtgtgaaaatcttcaggaaatgttgggtgaactcttcactcttgta
gaaacaccagaagcaccaaacagggggttcttcaaaggcctgtttggaggtggggcacag
tcacttgacagagaagaactctttggagaatcagcatctgggaaggcatcaaggagtctt
gcccagcatattccgggacctgggggtattgaaggtgtcaaaggagcagcgtctggtgta
gttggtgaactggcacgagcccggttggcactggatgaaagaggacaaaaactgggagaa
ctggaagaaaaaactgcagctatgctttatagtgctgattctttctcaaaacacgctcat
gagatgatgttgaagtacaaagacaagaagtggtaccaattctga
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integrated database retrieval system
