Lonchura striata (white-rumped munia): 110468861
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Entry
110468861 CDS
T05897
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110468861 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110468861 (HEATR1)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110468861 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_2
TOR1L1_N
RTP1_C1
CLASP_N
Vac14_Fab1_bd
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
110468861
NCBI-ProteinID:
XP_021382758
LinkDB
All DBs
Position
3:complement(44500628..44535453)
Genome browser
AA seq
2159 aa
AA seq
DB search
MTSLAEQLKRLALPQNDPSLLDRSEVASLLFTCKEAATIDRDTFFAIGCTGLEELMGIDP
SFEEFQSSLFSSTSKGLERSVQTKAVNQQLDKNISLFLIHLSPYFMLKPAQKCLEWLIQR
FHIHLYNQDSLIGCVLPYHETNLFVRVIQLIDIKSPTHKWHWMDPIRKPGVPLARGTVIT
HCYKDLGFMDFICRLVAKSVKVFSECPGNSAQLRVLLVFYASTIVSALGAAEKITDTMVS
LLLPYVQKGLKSSVQDYRAATYMIICQMTVKVTVETSLVHSLMVQISKTLLKVPALIRDG
LACLNLLLQTQKGDKLGEKPFNYLCKTPELVTLLQGLSAGYDISPLLRYLLPHLVHTIVK
SDTEEQEESEETEDDIYIKHLQNILESIPLEKDLDSLLASKFLEEFISHGTEIESDPTKM
AALNQKILPLIRLLEKKYPKALDSVLEKHLEDCTDEADQNLFHQFISLSLSCGKYKFLED
SDTSLLLSLNHPQPAVRVLALQHLKDVIETSKEGFDQAFIEEAIFGRLKDDNRDVVMSAL
SSLETFREQVKPEVIVSSLLNIFQKADLSKDGKWYKVLEQAVKILVKEEILKEKKKLLDA
AVMQLLPFMIITNANSKSADWKMAVCLSESDLCSLHPLLKGWPEALEEAIKSTESTELVG
VANEKIILLLSGNLMSGSPYLLLQMVNDLILVAETESDSVRQKVTTHIIGAVLVQCCCNA
QMKAKYFPVAIRVFRFLDKKIKNLRTCESAEETAISWSVETEEETLVPKDLLSAYIEKLN
SGETAHAEESAMVLFLLKIFINGLKSPLSFSKEESWWNPESLNQDRKDYLHLLLGLFDLL
VSGASEGSNALQYRALMNLLFKVHLKDSEVLFKFLSILWTYSYNLSNQLNYEVSAMLQTQ
ALYIGYALLESETNQKKKQLLSPSSPVVISLLINLVSPVSEVRRAALNCLHSLRGIKESL
FHPVLQHLEQKTEEIVSDPTYIAQIMGTLFEELETQPKQKSQQKKLLESLENLLDCVQSP
IFPSYIARNLMKILHEIHGEIVLSHLLPALARLLGKVFKKAEAMLKDEVILLHLILEKFN
EYSAPLLCKNQQSLDLFIKSLHAAKKIYEEIPPFQITALGQITKPFFAAVSDGVVQQKLL
KVLFDLLLNCKNPLCAQTISSVFKGITVCAEQIVRELEPPEKTKSLATVQQTRRQKMLQQ
RKPHNAELAPSDSRWQRVMLILELLQHKKKLRHPQALVPVLFNLLSRCLEPRASKEENME
YTKQLILSCLLNICQKLSSDGGKVPADILDKEKFNVELIVQCIRISKMPQTHHHALLLLG
AVAGMFPDKVLHNIMPIFTFMGANVLRLDDTYTFQVINKTVQMVIPALIQAEDSDLSESS
GSVEEVVTKIIRVFVDALPHVPEHRRLPILSQLITTVGGDKFLWVLLVLLFEQYVTKTVI
VTLSTEKDAVLEADTEFWISICCEFNVRSQFQSMMKIIQYLTELPENKEVSSTDDPGTKK
LRTCKTKPKNQDGQLFNVESHSDKQLRHFKFLSVSFMSQLLSSQSFVKKIVEYEEPEVLQ
ELEQRLLEEVLHYINTVASSVEGNVDKPTAKFWRVLLSKSYDTLDKVNALLPTETFIPVI
GGLMMNQLPSVRRKAMDLLNNKVQQRTKWQKSQILQLLELVPELIAIVKCKRNEEEEEQA
INRQTALFSLKLLCKGFGTENPAPFVPVLKMAIDLISSEKEEKNVMGSALLCIAEVTCTL
KAQAIPQLPRLMPALLKTLKSKKELVSNEIYLLSAITALLKVAETLPHFLSPYLLECLLQ
VVRLEKIVAEFGPASQISVRVAALKTILATRLAPRILLPAVTKCYSEVLHTRKNCLGPLM
NILKEHIAGMQKEHLISHQPELTAFFMKVLDFRAEHTEDDLEEVGKIEAYIIDCLITMVM
KLSEASFRPLFFKLFDWSKTEATLRDRLLTFHRIADCIADKLKGLFTLFAGHLVKPFAET
LNQVNISKTDEAFFDSDNNTEKSCLLLQFTMDCLHKLFLFDTQKFLSKERAETLMQPLVD
QLENVLGGDEKFQERVTAHLIPCIAQFSVAMADDSLWKPLNYQILLKTRHSSPKVRFAAL
LALIEVAQKLKENYLVLLPESIPFLAELMEDECEEVEQQCQKTIQQLEVILGEPLQSYF
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggcggagcagctgaagcggctggcgcttccccagaacgatcccagcctc
ctggaccgcagcgaggtggcatcgctgctcttcacctgcaaggaagccgccactattgac
agggacacgttttttgccatcggatgcactggcttagaagaactgatgggcattgatcct
tcatttgaagagttccagtccagtttgtttagttccacatccaaaggccttgaacgcagt
gttcagactaaagcagtaaatcagcagctggacaagaatatttcactgttcctcattcac
ctgtccccctactttatgcttaagccagcccagaagtgccttgaatggctgattcagaga
tttcacattcatctctacaatcaagacagtttgattggttgtgttctaccatatcatgag
actaacctatttgtgagagttattcaacttatagatataaaaagcccaactcataagtgg
cattggatggatccaatacggaaacctggagtcccactggcaaggggtactgtcattaca
cactgctacaaagacctgggcttcatggatttcatctgcaggctggtggcaaaatctgtg
aaggtcttttcagagtgtcccggcaactcagctcaactgagagttctccttgtgttttat
gcttccaccattgtgtcagctcttggagctgcagagaagataacagacactatggtctct
ttgctgctgccttatgtccaaaagggcttgaaatcctctgtacaggattacagagctgca
acatacatgataatctgccagatgacagtaaaagtgacagtggagacttccttggtgcat
tccttgatggtacagataagcaagacattactgaaagtgcccgcattaatcagggatggg
ctggcttgcttgaacctacttctgcaaactcagaaaggagataaacttggggaaaagcca
tttaattatctgtgcaaaaccccagaactggtaacacttttgcaaggcctgtcagcgggc
tatgatatctctcctctcctccgctacctgttgcctcaccttgttcacaccattgtgaaa
agtgatacagaggagcaagaagaatctgaagagacagaagatgacatttacatcaagcat
cttcaaaatattcttgagagtataccactagaaaaggatttagattccctgttggcttcc
aagtttcttgaagagtttatctcgcatggtacagagattgaatctgatcccaccaaaatg
gctgcactcaatcaaaagatccttcctctcatcagacttcttgagaaaaagtatcctaaa
gccttagactctgtgttggagaagcacctggaagattgcacagatgaggctgaccaaaat
ctttttcatcaatttatttctctttcattaagctgtggcaagtacaagtttctggaagac
tctgatacctcccttctgcttagtttgaatcatcctcagcctgctgtgcgggtcttggct
cttcagcatttgaaagatgttattgaaacttcaaaggaaggctttgatcaggctttcata
gaagaagcaatttttggacggctcaaggatgacaacagagatgttgttatgtctgctctc
agttctttggagactttcagggaacaagtcaagccagaagtaatagtatcaagtcttttg
aacattttccagaaagctgatctttcaaaggatggaaaatggtacaaggttttggagcaa
gcagtaaaaattttagtcaaagaggagattttgaaagagaagaaaaaactgctagatgca
gcagtaatgcagttgttaccttttatgataatcactaatgcaaattcaaaatctgcagat
tggaaaatggctgtgtgtttgtcagagtctgatctctgctccttgcatcctttactgaaa
ggctggccagaagctcttgaggaggcaattaaatctacggagtctacagagttggttgga
gtggccaatgagaaaattattctgctactttctggaaatttgatgtcagggagcccttac
ttactattgcagatggttaatgacctgatactcgttgctgaaacagaatctgacagtgtg
agacagaaagtaactactcatataattggtgcagtgcttgttcagtgctgctgcaatgca
cagatgaaggcaaagtattttccagtggctatcagagtatttcgcttcttggataaaaaa
atcaagaatctcagaacttgtgaatctgcagaggaaactgccataagctggtctgttgaa
acagaagaggaaactttggtgcctaaggacttgttaagtgcatatatagaaaagctcaac
agtggtgagactgctcatgcagaggagtcagctatggtcctgttcttattgaaaatcttc
attaatggcctaaaatctcccctgtccttttcaaaagaggaatcttggtggaatcctgaa
tctctgaatcaagataggaaagactacctgcacctccttttggggctgtttgacctgctt
gtcagcggagctagtgagggaagcaatgctcttcagtacagagcattgatgaatctctta
ttcaaggtacatctaaaagattcagaggttctcttcaaattcctttccattttatggact
tacagctataacctttcaaatcaactgaactatgaagtcagtgcaatgctacagactcag
gctctgtacattggctatgcactgcttgaatcagaaacgaaccagaaaaagaaacagctg
ctatcaccatcatctccagtggtgatatctttgctaattaacttggttagtcctgtgagt
gaagttcgaagggctgctctcaactgcctccattccttgagaggaataaaggaatctctg
tttcatcctgtccttcagcatttggagcaaaagacagaagagattgtatcagaccctaca
tacatagcgcagattatgggaacgctatttgaggagcttgagacacagccaaaacagaaa
tcccagcagaaaaaattgttggaatctttggaaaacttacttgattgtgtacagagccct
attttcccatcatatattgcaagaaacttaatgaaaattcttcatgaaatccatggtgaa
atagttctttctcacctcttgcctgcactagcccgtctgctagggaaggtctttaagaaa
gctgaggcaatgttaaaagatgaagttattctcctgcatctaatccttgaaaagtttaat
gaatattcagcacccctcctttgcaagaatcagcagagtctggatttattcatcaaaagt
ctgcatgctgccaagaaaatatatgaagaaattccaccatttcagatcacagcacttggg
cagattactaagccattctttgcagctgtgtcagatggagtggtgcaacagaagctgcta
aaagtattgtttgacttactcttaaactgtaagaacccactttgtgcccagacaatcagc
agtgtgtttaaagggattacagtatgtgctgagcagattgtcagagaactggagcctcct
gagaaaaccaaaagtctggccactgttcaacagactagaaggcagaaaatgctgcaacag
agaaagcctcacaatgcagaattggcaccaagtgactccaggtggcagagggtgatgctt
attctggagttactgcagcataagaagaagcttcggcatccgcaggcgttggtacctgta
cttttcaaccttctgagcaggtgtttggaacccagggcatcaaaagaagaaaatatggaa
tatacaaagcagctgatcctcagctgtctgctgaacatctgtcagaaattgtcctcagat
ggtggcaaggtcccagcagatatcctggacaaagaaaaattcaatgtggaactgatagtt
cagtgcatcaggatttctaaaatgccccagacacaccaccatgccctgctgctccttggt
gcagttgctggaatgtttcctgataaagttcttcacaacattatgcccatttttacattc
atgggagcaaatgtcttgcgtctggatgatacctacactttccaagtaattaacaagaca
gtgcagatggttattcctgctcttatacaggctgaagacagtgacttgtcagagtcctcg
ggaagcgtggaggaggtggtgaccaagatcattcgtgtgtttgtggatgccctgccccac
gtgccggagcaccggcgtctgcccatcctgtcccagctgatcactacagtgggaggagac
aaattcctctgggttctcctggtgctgctctttgagcagtacgtgaccaaaactgtgata
gtaacactaagcacagaaaaggatgctgttctggaagcagacactgaattctggatttcc
atctgctgcgaatttaatgtacgttcgcagttccagagcatgatgaagataatccaatat
ctgacagagctgccagagaataaagaagtgtcttcaacagatgatcctgggacaaaaaag
ttaagaacatgtaaaacaaagccaaaaaatcaggatgggcagctctttaatgtggagtcc
cactctgacaaacaactccggcatttcaaattcttgtcagtctccttcatgtcacaactt
ctgtcctctcagagttttgtgaaaaagatagttgaatatgaagaaccagaagtgctgcag
gagttggaacagaggctgttagaagaagttcttcactacataaacactgtggcatcttca
gtggaaggaaatgtggacaagccaacagccaaattttggagggttctgcttagcaagagc
tatgatacgctggataaagtcaacgccttactgccaacagaaaccttcatccctgtaatt
gggggactgatgatgaatcagctgccatcggtgaggcgcaaggccatggacctcctgaac
aacaaggtgcagcagcgcaccaagtggcagaagagccagatcctgcagctcttagagctg
gttcctgagctcattgctattgtcaagtgcaaaagaaacgaggaagaggaggagcaagcc
atcaacaggcagactgctttgttcagcctcaagctgctctgcaaaggttttggcacagaa
aatccagcaccatttgtgcctgttctgaaaatggccattgatctaatttcttcagagaag
gaggaaaaaaatgtgatgggaagtgctttgctctgtatagctgaagtcacctgtacactg
aaagcccaagcaatacctcagcttccaaggctgatgccagcactcttgaagactttaaaa
agtaagaaggagctggtctccaatgagatttacctgctgagtgccatcactgctctgcta
aaggttgcagaaacactgccacacttccttagtccttaccttttggagtgcttgttgcag
gttgtccgcttggaaaagattgtggccgagtttggtcctgcttcccagataagtgtccgt
gtagcagcactgaaaaccatcctagcaacaaggctggcccctcgaatactcctgcctgca
gttaccaagtgttacagtgaagtgctgcatacccgcaagaactgtctgggtccccttatg
aacattttgaaggagcacattgctggtatgcagaaggagcacctgatctcccatcagcct
gaactgacagcatttttcatgaaagttttggacttccgagcagagcatacagaggatgac
ttagaggaagttggtaagatagaggcttacattattgactgtctaatcactatggttatg
aaactttccgaggcttctttcaggcccctcttcttcaagctctttgattggtccaaaaca
gaggctaccctgagagacaggctgctaacattccaccgaatagcagactgcatcgcagac
aagctcaagggtctcttcaccctctttgctggtcatttagtgaagccgtttgctgagaca
ctgaaccaggtcaacatttctaaaactgatgaagctttctttgactctgacaataacaca
gaaaagagctgtctgctgttgcagttcacaatggactgtctgcacaagctcttcctgttt
gatacccagaagttcttgagtaaagaaagagcagaaaccttgatgcagcctctggtcgat
cagctagaaaatgtgcttggaggagatgagaagttccaggaaagagtgacagcacacctg
ataccctgcatagctcagttttcagtggcaatggcagatgattctctttggaaaccactg
aactaccagatcctgctgaagacaaggcacagttctcctaaggtccgatttgccgccctg
cttgctttgatagaagttgcacaaaaactaaaggagaactacctggtcctgctaccagaa
tctattccattcttagctgagcttatggaagatgaatgtgaagaagttgaacagcaatgt
cagaagacaattcaacaactggaagtcattttgggagaaccactccaaagctacttctaa
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integrated database retrieval system
