Lonchura striata (white-rumped munia): 110468912
Help
Entry
110468912 CDS
T05897
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110468912 (ZC3H12D)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110468912 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
110468912
NCBI-ProteinID:
XP_021382856
UniProt:
A0A218VAZ0
LinkDB
All DBs
Position
3:46585923..46592756
Genome browser
AA seq
606 aa
AA seq
DB search
MALASSISSKEPPPHSRKVSAAGVEVHQSKMDFFCKLGYGKQDICKVLENLGQEALEDDV
LKELIRLGSKPQALENQAQPSQLKLVARGSCSTTPGLKWLGEEESDSSDSLRPIVIDGSN
VAMSHGNKEVFSCWGIQLAVDWFRERGHTYIKVFVPLWRKEPPRQDSPIADQHILEELEK
QSILVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFIEQRL
LMYSFVSNRFMPPDDPLGRHGPTLTNFLSKKPVFPEKKWQPCPYGKKCTYGNKCKFYHPE
KQRHAQLSVADELRAKTKVPFALGKEEERRQCSPCDACTGTLREARGCSGPCCCPGRAPG
SCPEHSFRAWASSPGSDLRLDQRLPQPEPLLEKMSAVSISEDTYGCSWSLCASGDRGVTA
GPQRCSGLRHELLSLHQRRGLERSGCPGCPFPRTGLPRAHGGTCPRHGWARQRPAVPGTG
RGSRSFPGGAQHEQALETPQPLLLQPTAPSPAGVPPHSEPRLQRRQRCFPGPAPGQPAPS
EPSIGTALFQKAHAYPSASYRDYWPSPAQQMNIHRELCSPYPYSGMSQVMTLYPRIQDKG
TGAPPL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcactggccagttcaatttctagcaaagaaccaccaccacactccagaaaagtttct
gcagcaggggtggaagtgcaccagagcaagatggatttcttctgcaagttgggctatggt
aagcaggacatctgcaaagtgctggagaacctgggccaagaggccctggaggatgatgtg
ctgaaagagctgattcggttggggagcaaacctcaggctctggagaaccaggctcagcct
tcccagctaaagctggttgcccgtggatcgtgtagcaccaccccggggctgaagtggctg
ggagaagaggaaagtgattcttccgactccttgaggcccattgtgatcgatggcagcaac
gttgcaatgagtcatggaaacaaggaggtgttctcctgctgggggatccagctggcagtg
gattggtttcgagagagggggcacacttacatcaaggtttttgtcccactctggagaaag
gaaccccctcgacaagacagccccattgcagatcagcacatccttgaggagctggaaaag
caatccatcctggtctacacaccctcccggaaggtgaaaggcaagcgggtggtttgctac
gacgatcgctacatagtgaaagttgcttatgagaaagacggagtcattgtgtccaatgac
cactaccgggatctccaaaatgaaaaccccgagtggaaatggttcattgagcagcgacta
ctcatgtactcttttgtcagcaacaggtttatgcctcccgatgatccattaggccggcat
ggacccaccttgactaacttcctcagcaaaaagccagtgtttcctgaaaaaaaatggcag
ccttgtccttatggtaaaaaatgcacctatggcaataaatgcaaattttaccacccagag
aaacaacgtcacgctcagctttcagttgctgatgagctcagggccaaaacaaaggtcccg
tttgcgctggggaaagaggaggagaggcgccagtgctccccgtgcgatgcctgcacagga
actctgcgggaagccagaggctgctctgggccttgctgctgcccaggcagggccccgggg
agctgccctgagcactccttccgtgcctgggccagcagtcccggctccgacctgcggctg
gaccagcgcttgccgcagccggagccgctcctggagaagatgtcagcggtgtccatcagc
gaggacacctacggctgcagctggtccctgtgcgcctctggggacaggggggtcacggcc
ggccctcagcgctgctctggcctcaggcacgaactgctctcgctccatcagcgccggggc
ttggagcgcagcggctgtcccggctgtcccttcccgcggacggggctcccgcgggcgcac
ggcgggacgtgcccgcggcacggctgggctcggcagcgcccggctgtgcccggaacaggc
cgggggagccgctccttccccggcggtgctcagcacgaacaggccctggagacgccgcag
ccccttctgctgcagcccacagccccgtccccggccggggtccccccgcacagcgagccc
cggctgcagcggcggcagcgctgcttccccggcccggccccggggcagcccgcgccctcc
gagcccagcatcggaaccgccttattccagaaagcccacgcctaccccagtgcctcttac
agggactactggcccagccctgcccagcaaatgaacatccacagggagctgtgctcccct
tatccttacagcgggatgagccaggtcatgactttgtaccccaggatccaggataagggg
actggagcaccgcccctatga
DBGET
integrated database retrieval system