Lonchura striata (white-rumped munia): 110468972
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Entry
110468972 CDS
T05897
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110468972 (RTEL1)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110468972 (RTEL1)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110468972 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
SNF2-rel_dom
T4_Rnl1_C
Motif
Other DBs
NCBI-GeneID:
110468972
NCBI-ProteinID:
XP_021383009
LinkDB
All DBs
Position
20:2410963..2450364
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AA seq
1246 aa
AA seq
DB search
MPRITLNGITVDFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGVELFPDRPLSSWGTAATDGDVPTYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKICVLGSREQLCINPEVKRQEGNHMQIYMCRMKVMARACHFYNNVEE
KSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRKSHNL
DLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASAMDAINVVLEEQAKVVQQNEINAEFN
MELASSGLNMELEDIAKIKKILLQLESAIDAVELPANGNGVTKEGSYIFDLFAEAQITLQ
TKSSLLESLEQILQFLSGRTGIFVNTSGLHKVSDIIQTVFSMDPPEGVTTGFLPRQAISK
YYKVHIHVDNGNQKKKQRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVRQGVRTIILTS
GTLSPLSSFTMEMQIPFPVCLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERRFSEDYLS
SLGKTIGNLVRLVPHGMLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFS
EVIDAYYDKVACPKSNGAAFLAVCRGKASEGLDFADINGRGVIITGLPFPPRMEPRVILK
MQFLDEMRRSGAGAQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTCDV
RGKLPSWVRPYVNVYDNFGHAVRSVSLFFRVAQEIMPPPLPQCPPGRAGSLSESNAAPST
SSEQSLSLQKAKNLDDHVPSLKRKRKGNGDGAPSLCVEYEQEFVSPRRKCVGLLDALERS
EKSSEDAEEETDLLGEEKAHRLSTLSLQYEKRLTDEQKGGRKKIKLISNTQERSAEPAEP
KKARATFYIATVKDTLSQQNYELFSKALQQYKKTDDFHAMLSQMSSLFVEDVKKHVLLRD
FYQFVRPQHKKQFDEACCNLTGVGCGYKPEHSLPREEREMLAKRMEEKQSQQKSTFSKAS
CAQLNPGLHLNQGGSHLTTGLNSAGQNASAAPRKEAEKAPGCRREHHQALRTAYLSDVQR
ALDKSSYRQFYEALLAYKKTDNYNAMVSVIATLTTERPQDFHLLQRFYMFVRPHHKEQFR
ELCKDLTGMVCGDGEKQLQQLEQSEGKPQSLESCTKGISHLQDTSTSRSGAPEKIQTKIS
SFCFSQKSELELPKTEVSKETNNVRAPTDSGVVPIFPLEMEPECGR
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatcactctgaacgggatcacggtggatttccccttccagccctacccatgc
caggaagcctacatggccaaggtgctggaatgcctgcaaaagaaggtaaatggcattttg
gagagccccacaggcacagggaagaccctgtgcctgctgtgttccaccctggcctggcgg
gagcacttcaaggacaccatctcagcccggaaaatcgcgcagcgcatgaacggggtggag
ctctttcctgacagaccactgtcctcctggggcactgctgccacagatggagatgtccca
acttattacactgacattccaaaaataatttatgcctccaggactcactcccagcttaca
caggtcattaatgagctaaagaacacagtgtacaggccaaagatttgtgtgctgggatcc
agggagcagctctgcatcaatcctgaagtgaagcgacaggagggcaaccacatgcagatc
tacatgtgcagaatgaaagtgatggctcgtgcttgtcatttctataacaatgtggaagaa
aagagtacagagaaagaactgattgaatcaatcatggatattgaagacttggttaaaaat
ggaaacaagcacagagcttgtccttattatctctctcgaagcctgaagcagcaagcagac
attatttttatgccttacaactatttgctagactcaaagagcaggaaatcacacaacttg
gacctgaaggggactgtggtgatactcgatgaagctcacaatgtggagaagttgtgtgag
gagtcctcttcttttgatttgactccctatgatttggcttcagcaatggatgcaataaat
gttgtcctggaggagcaagccaaagtggttcaacagaatgaaatcaatgctgaattcaac
atggaattggccagttcaggactgaacatggaactggaagatatagcaaagatcaagaaa
attcttcttcaacttgaaagtgctattgatgcagtagagctgccagcaaatggcaatgga
gtcaccaaagagggaagctacatctttgatctgtttgcagaggcccaaataacactgcag
accaaatcctccctcttggagtcactggagcagattttacagtttctttcaggccgtact
gggatatttgtcaatacatctggattgcataaggtctcagatattattcagacagtcttc
agcatggatcccccagaaggagtcacaacagggttcctgccacgtcaggcaatatctaaa
tattacaaggtacatattcatgtggataatggtaatcagaaaaagaaacaaaggacagat
ctctggaactcatcatcttcaaaaagacaagggaagactttaagctattggtgtttcagc
cctgggtacagcatgcatgagctcgttcgacagggagtcaggacaatcatcctcaccagt
gggacactctcccctctctcatcattcacaatggaaatgcagatcccttttcctgtttgc
ctggagaatcctcatgtaattgataaacaccagctctgggttgggatcattccaaagggg
cctgatggaactgtgcttacttccacctatgaaagaaggttttcagaggattatttatct
tctctggggaaaacaattggtaaccttgtgcgacttgtgccacatgggatgttggtgttc
ttcccatcgtatccagtcatggataagagcctggagtactggagagagcatgattttgcc
aaaagaatagaagaagtgaagccaatgtttgtggaacccaggaacaaaggaagcttttca
gaggttattgatgcctattatgataaagttgcctgtcctaagtcgaatggagctgctttt
ttggcagtgtgtcgaggcaaggccagtgaaggcttggactttgcagacataaatggacga
ggagtcatcataactgggcttccatttccccctcgtatggagcccagagtaattttaaag
atgcaattcctggatgagatgaggagaagtggtgcaggtgcacagtatctgtctgggcgt
gagtggtacagtcagcaagcgtcccgggctgtcaaccaggccatcggccgggtcatcagg
caccgccaggactacggggccatcttcctgtgtgaccacaggttcacaacttgtgatgtc
agaggcaaattgccttcatgggtccgtccctacgtgaacgtttatgacaactttgggcat
gcggtcagaagtgtctccctcttcttccgtgtcgctcaagaaattatgcccccacccctg
cctcagtgccctcctggacgtgctggttccctaagtgaaagcaatgcggcaccatctact
tcatctgagcagagcctctccctgcaaaaagctaaaaacctggatgaccatgttccaagt
ttgaagaggaaaaggaaaggaaatggagatggagcacccagcctgtgtgtggaatatgaa
caggagtttgtctcaccccgaagaaaatgtgttgggctcttggatgccttggaacgcagt
gagaagagcagtgaagatgcagaggaggaaactgatttgctaggagaggaaaaggcacat
cgtctgtccacactttcccttcaatatgagaagagattaacagatgagcagaaaggagga
aggaagaaaataaagctaatcagcaatacacaggagcggagcgcggagccggcggagccc
aagaaggcgcgagccacgttttacatcgccaccgtgaaggacaccctgagccagcagaac
tatgagctcttctccaaggctctgcagcagtacaagaagacagatgacttccatgccatg
ctgtcccagatgagctccctctttgtagaggatgtaaaaaagcacgtcttgctgcgagat
ttttaccagtttgttcgaccccagcataaaaagcagtttgatgaagcgtgctgcaatctg
actggagtgggctgtggctacaaacctgagcacagcctcccacgtgaggagagggagatg
ctggccaagagaatggaagaaaaacagagccagcagaaaagtacattctccaaggcctcg
tgtgctcagctgaaccctgggctccacctgaaccaaggaggatcccacttgacaacagga
ctcaatagtgcagggcagaatgccagtgcagctccaaggaaagaggctgaaaaggctcca
ggctgcaggagagagcatcaccaggccctcaggactgcctacctcagtgatgtgcagagg
gctttggacaaaagcagctacaggcagttctacgaggctctgctggcttacaagaagaca
gataattacaatgcgatggtgtcggtgatagcaaccctcaccactgagaggccacaggac
tttcatctgctacaaaggttttacatgtttgtgcgtcctcaccacaaagagcagttcaga
gagctgtgtaaggatttgactggaatggtttgtggtgatggagagaagcaactgcaacag
ctggagcaaagtgaagggaagccccagagcttggagagctgcacaaaaggaatcagccac
ttacaagacacatccacttctaggagtggggcaccagaaaaaattcagactaagatttcc
tccttctgctttagccagaaaagtgaacttgagttgccaaagactgaagtgtccaaagaa
accaataatgtgagggcacccacagactctggagttgtgcccatctttcccttagagatg
gagccagagtgtggtaggtag
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