KEGG   Lonchura striata (white-rumped munia): 110469078
Entry
110469078         CDS       T05897                                 
Symbol
XPO1
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03008  Ribosome biogenesis in eukaryotes
lsr03013  Nucleocytoplasmic transport
lsr03250  Viral life cycle - HIV-1
lsr05164  Influenza A
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110469078 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    110469078 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110469078 (XPO1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110469078 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110469078 (XPO1)
   03009 Ribosome biogenesis [BR:lsr03009]
    110469078 (XPO1)
   03016 Transfer RNA biogenesis [BR:lsr03016]
    110469078 (XPO1)
   03036 Chromosome and associated proteins [BR:lsr03036]
    110469078 (XPO1)
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110469078 (XPO1)
Ribosome biogenesis [BR:lsr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    110469078 (XPO1)
  Pre-60S particles
    110469078 (XPO1)
Transfer RNA biogenesis [BR:lsr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    110469078 (XPO1)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     110469078 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3
Other DBs
NCBI-GeneID: 110469078
NCBI-ProteinID: XP_021383161
UniProt: A0A218URZ2
LinkDB
Position
3:25643702..25678561
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPACV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGLLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEETAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggattttaac
cagaaactggatatcaatctcttggacaatgtggtgaactgcttgtaccatggagaaggt
gcacagcaaagaatggcacaagaagtgttgactcacttaaaagaacatcctgatgcgtgg
acaagagttgatactattttggagttctctcagaatatgaataccaaatattatggactg
caaatcttggaaaatgtgataaaaacaagatggaagattcttccaagaaaccagtgtgaa
ggtattaaaaaatatgttgttggcctaattatcaagacctcatctgacccagcgtgtgta
gaaaaagagaaagtgtatattgggaaactgaatatgattcttgttcagatcctgaaacaa
gagtggccgaagcactggccgacatttatcagtgacattgtgggagcgagcaggaccagt
gagagcctctgccagaacaacatggtgatcctgaaactgctgagtgaagaagtgtttgat
ttttccagtggccagattactcaagtaaaagctaagcatttgaaagacagcatgtgcaat
gaattctctcagatatttcaactgtgtcagtttgtgatggaaaactcccaaaatgctccc
ttagtccatgcaactttggaaactttgctacgatttctgaactggattcctttgggatat
atatttgagaccaagttaatcagcacactaatatacaagttcttaaatgttcccatgttt
cgcaatgtctctttgaagtgcctcacagagattgcaggtgtcagtgtaagccagtatgaa
gaacagtttgtaacactttttacactgaccatgatgcagttaaaacagatgcttccttta
aataccaatatccgacttgcatactcaaatggaaaagatgatgaacagaacttcattcag
aatctcagtttgttcctctgcacgttcctcaaggagcatggtctacttatagaaaaaagg
ttaaatctgagggaaacactaatggaggctcttcattacatgttgttggtatcagaagtt
gaagaaactgaaattttcaagatttgcctggagtattggaaccatttagcagctgagctc
tacagggaaagtccgttctccacgtcagcttcgccgctgctttcagggagccaacacttc
gatgttcctccaaggagacagctttatttgcctgttttgtccaaggttcgattgctcatg
gtcagccgcatggccaagcctgaagaagtcctggttgtggagaatgatcaaggggaggta
gttcgggaattcatgaaggacacggattccataaacttgtataaaaatatgagagaaacg
ttggtttatctcacacatctggactatgcagacacggaacgaattatgactgaaaagctt
cacaatcaagtgaatggaacggagtggtcgtggaagaatctgaacaccttgtgctgggct
atcggctccatcagtggtgccatgcacgaagaagatgaaaaaagattcctagttacagta
attaaggatctcctgggactctgcgaacaaaaacgaggaaaggacaataaagccattatt
gcatcaaatataatgtatatagtaggtcaatacccccggtttttgagagctcactggaaa
tttttgaagacagtagtcaacaagctgtttgaatttatgcatgaaactcacgatggcgtg
caggacatggcttgtgataccttcataaaaatagcacaaaaatgccgccgacactttgtc
caggttcaggtgggagaggtcatgccatttattgatgaaatcttgaacaatattaacaca
attatctgtgaccttcagccacaacaggtgcacacattttacgaagcagttggatacatg
attggggcacagacagaccaaactgtgcaggagcatctgatagaaaagtacatgttgctg
cccaaccaggtgtgggacagcataattcagcaggcaaccaagaatgttgatattctaaag
gatcctgaaacagttaagcagcttggtagcattctgaaaaccaatgtacgagcatgtaaa
gcagttggccacccctttgtgattcagcttggaagaatttatttagatatgttgaatgtg
tacaagtgcctaagtgaaaatatttctgcagctattcaggctaatggtgagatggtaaca
aagcagcccttgattagaagtatgaggactgtaaaaagggaaactttaaaattaatttct
ggctgggtgagcaggtccaatgatccgcagatggtagctgaaaactttgttcctccgttg
ttggatgcagttctcatcgactaccagcggaatgtgccagctgctcgggaacccgaggtg
ctcagtaccatggctatcattgtcaacaagctggggggacacatcactgctgaaatacct
cagatctttgatgctgtttttgagtgcacactaaacatgatcaacaaggattttgaagaa
tatcctgaacatagaacaaacttcttcttgctacttcaagctgtaaattctcactgcttt
ccagccttcctggccattccacctgcacagttcaaacttgtcttggattctattatttgg
gctttcaaacacacaatgagaaatgttgcagatacaggacttcagatcctttacaccctg
ttgcagaacgttgcacaggaggagactgctgcccagagcttctatcagacatatttctgc
gatatcctccagcacatcttctctgtggtcacagacacctctcacactgcaggtttgaca
atgcatgcatcaatccttgcctacatgttcaacttggtagaagagggaaagataagtact
cctttaaaccctggaaatccagtgaataaccaaatgtttattcaggagtatgtggctaat
ctcctcaaatctgcatttcctcacctgcaagatgcccaggttaagctgttcgtaacagga
ctcttcagtttaaaccaggatattcctgccttcaaggaacacctaagggatttcctggtc
caaatcaaggaatttgcaggtgaagacacatcagacttattcttggaggagagagaaaca
gcccttcgacaggctcaagaggagaagcataaacttcagatgtctgtacctggcatcctt
aatccacatgaaattcctgaggagatgtgtgattaa

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