Lonchura striata (white-rumped munia): 110469107
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Entry
110469107 CDS
T05897
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X2
KO
K13210
far upstream element-binding protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110469107 (FUBP1)
03041 Spliceosome [BR:
lsr03041
]
110469107 (FUBP1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110469107 (FUBP1)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110469107 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
SIMPL
Motif
Other DBs
NCBI-GeneID:
110469107
NCBI-ProteinID:
XP_021383253
UniProt:
A0A218VEJ6
LinkDB
All DBs
Position
8:19128642..19162840
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AA seq
643 aa
AA seq
DB search
MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDQPDAKKVAPQNDSFGNQLPPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDG
PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY
KVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQ
NDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRG
RGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADP
NMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPM
GPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYY
AHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPA
GAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcccgggggaggtggcggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcagcgggctaggcagattgca
gcaaaaattggaggagatgctggcacagcaatgaattcaaacgactacggttacggaggg
cagaaaagacctcttgaggatggagatcaaccagatgctaagaaagttgctccccagaat
gactcttttggaaatcagctaccaccaccgatgcatcagcagcaaaggtctgtgatgaca
gaggagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcag
atctcacgcatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggc
ctgcctgaaagatcatgtatgctaactggaacaccagagtctgttcagtcagcaaaaaga
ctgcttgatcaaatagttgaaaagggaagacctgcacctggatttcatcatggtgatgga
cctggaaatgcagtccaggaaattatgattccagcaagtaaagcaggattagttattggg
aaaggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgatt
caagatggtccacagaacactggtgcagacaagccccttaggataactggagatccttat
aaagttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttaga
gaggtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaata
ccacgatttgctgtaggtattgtaattggaagaaatggagagatgattaaaaagatccag
aatgatgctggtgttaggatccagttcaagccagatgatggaacaactccagatagaata
gcccagatcacagggcctcctgatagatgtcagcatgctgcagaaattattaccgatctc
cttcgcagtgttcaggctggtaaccctggtgggccaggacctggtggtcgaggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggagttcaattttatt
gtccctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtata
agccaacagtctggtgctaggatagaacttcagagaaatcctccacctaatgcagatcca
aacatgaagatgtttactatccgtggaacaccgcagcaaatagattatgcacgacaactt
atagaagaaaagattggaggtccagtgaatccattgggtccacctgttccccatggtcct
catggtgttgttcctggcccgcatggacctcctgggccaccaggtcctggtgctcccatg
ggaccatataatccagctccttataacccaggccctcctggtcctgcacctcatggtcct
ccagctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaac
ccaccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattat
gctcactattatcagcagcaagcacagccaccacctgcagcccctcctggtggaccagct
acaacccaaaccaatggacaaggagatcagccaaatccagcaccagcagggcaggttgac
tataccaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgcccctgct
ggggctcctccaggcgggcagccagattacagcgcagcgtgggctgagtactacaggcag
caggcagcgtactacgctcagacgagtccacagggaatgccacagcatcctccagcacca
cagggccaataa
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