Lonchura striata (white-rumped munia): 110469216
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Entry
110469216 CDS
T05897
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110469216 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110469216 (MID1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110469216 (MID1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110469216 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
110469216
NCBI-ProteinID:
XP_021383438
UniProt:
A0A218US43
LinkDB
All DBs
Position
1:19924225..20062300
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AA seq
667 aa
AA seq
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METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDEASSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatccttgtctcc
cactgcgccaccaacgagccggtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctccgtcagtgggcccaattcccccagtgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtcctctgccag
ttctgcgaccaggaccctgcccaggaggcggtgaaaacctgcgttacctgcgaggtgtcc
tactgtgaggagtgcctgaaagccactcaccccaataagaagccgttcaccggccaccgt
ctcatcgagcctatcccagactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaatatgtactgtgtgactgatgaccagttaatttgtgccttgtgtaaactg
gtcgggcgacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaacactgaactggaaactctt
ctggcaaaactcattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccaattaattgaaataatccagcaaagacggcaaataatt
ggaaccaaaatcaaagaaggaaaggtggtgaggctgaggaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcgacatccctcatctctcaggctgagcagtcactg
aaggagaacgatcacgcccgcttcctgcaaacagctaaaaatatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaatgatacttttgat
actttcgcacttgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagagctctgtacagcctcctatgataccattact
gtgcactggacatcagatgatgagttcagtgtggtttcttatgagctgcagtacaccatc
ttcactggacaagccaacgttgttagtttatgcaactcagccgacagctggatgattgtt
cctaatatcaaacaaaaccactacacggtgcacgggttacagagtggcacgaagtacatc
ttcattgtcaaggccattaaccaggctggcagccgcagcagtgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgctcatagaaaactgaaagtgtct
catgataacttgacagtggaacgagatgaagcatcatccaaaaaaagtcacacaccagag
cgattcacgagccaagggagctacggagtagctggcaacgtgttcatcgacagcgggcgg
cattactgggaagtggtgataagcgggagcacatggtatgctattggtatttcctacaaa
tcagcaccgaagcacgagtggattggaaagaattctgcctcctgggtgctttgtcgctgc
aataacacgtgggtggtgcggcacaacagcaaagaaatccccatcgagcccgcgccgcac
ctccggcgggtcgggattttgctggactacgacaacggttcccttgccttttatgatgct
ttgaactccctacacctttacacttttgacattacatttggccagccagtgtgccccacg
ttcacggtgtggaataaatgtttgaccattataactggcttgcctatccctgaccaccta
gattcctccgagcagctcgcgtga
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