Lonchura striata (white-rumped munia): 110469318
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Entry
110469318 CDS
T05897
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110469318 (CFAP54)
Cilium and associated proteins [BR:
lsr03037
]
Motile cilia and associated proteins
Sperm associated proteins
110469318 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
110469318
NCBI-ProteinID:
XP_031363376
LinkDB
All DBs
Position
1A:complement(19417094..19519633)
Genome browser
AA seq
3139 aa
AA seq
DB search
MAQPAGPPPAAAGPQAPHAAFFGPVARGNPVVDSFEAELRRVLSSLRRLRGAGEAKHDLH
RHGANTLFNIWIKYKPRLPEWYYNERLVKVGDSLVEIKEYKLALLQCYERYLQQFVSVNL
DDVMGDVQRFKSAFFPNGVRDKNAALMFHALQARNVCIYQMVCSRDRNLQNQESLQTCLN
ALTSLRLTMQVALPQENLCWLIYNGTIHIYTICRHLMVMGQSAKVLEYLLWASICMESSI
PLLSVHYLTWRATLYAAVSQCYFDCQAGIHGEIFARRGLIKIDELKQLEDISSSLEHTET
EKIFREATLKMSVMIFKRAVYASRRKSNSFRRESKVNPRKAVNVSWPRTTTERLLVAMFD
GAAAQFLAILEALSDRSRNLLPPHPPVPDEMQIRDVTSELFSAGLEILSGGKSNGTNHFG
IINPSSTLLQLMIAGEKGVSGDAAVKFVKLAFSYEEWNVFYSALEFVDNFLQAQDDPTWK
KAEIELKLLALMQPIVFPGKFERIFSISDDGDSREGSTHQGSEKTQTVRKESLKPGDPFR
DLMILATTVFSYISTSEQNVHPDKEILVDVVMCLWQKCKMELQQIQTSGSHCLEYIHKHQ
AYQWVHILWIMNEIIEKSNIAGTNVMFAEITLCIAVILENVADSTSESKEKEGGSASLLQ
DEACDMPEILMKTPTEQLQIAYEILEKALNDMNTSRLMTLLPDGKSIFDSCCMKVDSNDQ
NLNSVLGCGDDKTGTSNGFVTDLHLELIQAQHRVAVKLLKITQGAQIVDRSPKSSKSHEK
NIEDFQYLSEELILKKIKRNKLSRAIFLMQKAAQKFPEDLTTTSQRQLLEEALTLIEQVE
AEQGALYRSLKEAMSSKKKSSTPPPPLLLSRSHCSMTFKPAPFDSDIQVSWYCILGSVAG
GSNMKVRLNSNKLQNSGEQIPADGKILLEVQGLDANEKYIFAVAAYSSDGKLIGDAIGQM
TKPILAYPPLSATTVRAYLTQAAYQTGNFRLARAAFSPMWDYFVSVSSPLPPNAAVISAS
SNLTISEKRLRFEAVSQTSPITLNLFLRNIFAVSDINVVEGALFCDSICSNEMFYKEQVA
RLAECERMTVAMELSTWLNNPSYILQSVVQCYGLLAPLIYHKIILVPVVQILIKCLAVLQ
EIPSATLQRGQEGCYESIQHMIACASYHTAKVLHSWKEYELSAVIINYGKKLLIPPGVSP
GQSGGVKTEETLTGKKRRSSRSSHLAAMAKAAENLNTLESSLLKLTEPGPGTQLTGKESP
LFLYPVISCWTSERAYTNLLKFRGQKRFLEFFVQLLHKVLNEEKFQCVLEWAEGVEDDLK
RRNKNVLGAEGISTQARSLTLRESTRAAGVQKGKNTSPSKKPKTSPLKKPTKKDVTKKGP
LREYLMKNPDAMNSPETQKKGKDKLKKLAHQTLVMLLSKYVTRNQFCQMCLEEMPWRSQM
NIYLAGAHYHLFKKNLEEQCNIGISGSQHLDSYNILDPEIFSFNNSGTVLAREAVEDNIG
KPTPSLLEKAEVTETQTFTGKSPKTRNKQSRTTQSQTAMTPEEQDEFPSNTILLKHFTSI
FLHLKRAVVLAHRGGHWTLLQNACRELWNYTQEFQLIANQSHSYMDALPITWDFLCNTIW
LPFYFASDMIIDMIIDLQASSSLKIVDHEGDFCIPSCLGGIVDENGGSNLYPQPPLDDVN
VVDLRWICNLILKTIELLYQMKKWEALVHIAVQFNILTHERFTEQVSPLLVYAQRQLLER
IQQFCGSNSHESHFTKYLSDDAQKMRCRNYIGYKLQLPIAHSVSEGVFPGCFFNPPTNND
STDHNQAKALVCVPLDVNDTLKCFTETLEKSKYQSRALRHSRKLLSLFLAHTQENTGRAV
SSHISSRRKLKFSVVDEVIFLPTPCDLSQEKYYFSSMVESRPIPKSKLSVIVSSYEQTIG
ILEMNNQRDLKVQALHELGNLHFYAGNKRAAFKYWCQSLDETLDIADALNTWQELSFPKD
ARDCFAVGISTEMSQKFLSQAGAWGCLHAAVLVAKIAQYITTSKMRLRTKYCYFSAILFK
TLFRASLPHPTSDYDFVQYETNILIPGIDLFSDRYRADISTVVASLNFIMLELHCAKQNL
IILPLFTLYQYIVSEICKDPAKCIEGRILKIKVLADIGFFTEAFHELSLLISGVRIPWKI
PAGYRYTEKMQALQKFDSSKSLMIATNLQVLEDTFKWSLSLTMVPLCNQQIMNKLILAKM
HLIICLAATINNIPEKVEKNVYSVDNSLPEPSKTTASNVKVDADQGSRQQEQRDRMVRLV
DCKDELNMAMLKGILLTEAEESLSYLVQDIQEKYDGDISRYSVEDLEALIEAKLELASIS
QQRHQAALSVALAFSAIRLLQDAKVFSVDIAHFQEEKNGRECLDSTTEGVPFPPRVTARG
HVNVHLWLRCRAMLVTALVTQIYGVGGMKGNDVAERRSVIKEVILEAEAFGDIETQAEMM
VQAAILDLQEKRPAADVKLLLQNIIGLLQEDTFISLPASLTLVKSMLLLADILLLQIVED
SEHCPSAVEPLNLLVLAHKLAIKAIFDCGESIEQQEDSTLTCLVLPIKNIYLPHINLLAQ
VKMKIGQTLAEKVAPTAARHPLQWLHALRHLESALNLCRASATKKLDMEAELLFQIGKVE
RQITETGNNKSSQAVETLLEAIKLSQQHDQKYELIRRSYLEIALLYLYFAENKEDESQTD
ESVPSKSSTFSGDGSSEEAMKSEVYKAQAWIAIRAATQVSEAVLASQLLIGLKSVKEQNM
KDEVQQKIPEFASMDLFSSYRDFISDGYNVISETPEVSSAENKQITEDTFQSESEGTESL
VAKVSQKKDTVTWIHMIRYYNNLKRIYNTNLSGPGSLSARDGHLGLISDTGIVLRIAEMH
SFLEKNLFEYSLCCLENFPEELRDVEMPLSNATDSSEMSLDVSESVSEMSHVLRMPSPVS
VVAEDEKTESRAARAPDKEINIQWYIPSMAKPSNDTEMKVLLLYAYNTNPVKISDISSTS
VFSGHLWIPLARIISLREKLSDVKEQVEILMYGSNSFSASVPASSLVQNETLKRSRSNKS
KRCDRKLHLDDKTEEIIKRCLSEVKALLSVVPALSSPLTEIPFDVTLQSIANLKDMFDLA
YGCIITEGSLFDWIITLLH
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcccgccgggccgccgcctgccgccgccggtccgcaggccccgcacgccgct
ttcttcgggcccgtggcgcggggcaacccggtggtggacagcttcgaggccgagctgcgg
cgcgtcctgagctccctgcggcggctgcgaggcgcgggggaggccaagcacgacctgcac
cgccacggggcaaatactttgtttaacatatggatcaaatataagccacgactaccggag
tggtattacaatgaaagacttgtgaaagttggtgatagccttgttgagatcaaagaatat
aagttggcacttctacagtgttatgaaagataccttcagcagtttgtttctgtaaacctt
gatgatgtcatgggtgatgtgcagcgctttaaatctgccttttttccaaatggtgtcaga
gacaaaaatgcagcacttatgttccatgctttgcaagcaagaaatgtttgcatttatcag
atggtttgcagcagagacagaaatcttcagaatcaagagtccctgcagacctgtctcaat
gccttgacctcattaagactcactatgcaagtggctctacctcaggagaatttgtgttgg
cttatctacaatggtactatccatatctacaccatatgcagacatttgatggtgatgggt
cagtctgctaaggtcctggaatacttactgtgggccagtatatgtatggaatcatccatt
ccactcttatctgtgcattatttgacgtggagagccaccctatatgcggcagtttctcag
tgttattttgattgtcaagctggcattcatggagagatatttgctcgccgtggtttgatt
aagattgacgaactgaagcaattagaagatatcagttcttctctggaacatacagagaca
gaaaagatttttagagaggctactctaaagatgtcagtaatgattttcaagagagcagta
tatgcatccagaagaaagtcaaacagctttcgacgtgagtcaaaagttaacccgagaaaa
gcagtaaatgtgtcatggcctcgcaccactactgagcggctgctggtggcaatgtttgat
ggtgctgcagctcagttccttgccatcctagaagcactgtctgatcgcagcaggaatcta
ttgccccctcatcctcctgttcctgacgaaatgcaaattcgtgatgtcacttctgagctt
ttttctgcaggcctagaaatcctctcaggtggaaagagcaatggcaccaatcactttggt
ataattaatccatcatctactcttctgcagttgatgatagcaggtgaaaaaggggtgtct
ggagatgctgctgtgaaatttgtaaaattagctttcagctatgaagagtggaacgtgttt
tactctgctcttgaatttgttgataattttcttcaggctcaagatgacccaacatggaag
aaagctgaaatagaactcaaacttcttgcattgatgcaacctatagtattcccaggaaaa
tttgaacgtattttttctattagtgatgatggtgatagcagagaaggcagcacacatcaa
gggtctgaaaagacacagacagttagaaaggaatccttaaagcctggagatccttttcgt
gatcttatgattttggcaacaacagtgttttcctacatctctacatctgagcagaatgtc
catcctgacaaagaaatacttgttgatgtagtaatgtgtttgtggcagaagtgtaaaatg
gaacttcagcaaatccaaacaagtggaagtcactgcttagaatatatccacaaacaccaa
gcttaccaatgggttcatatactctggataatgaatgaaataattgagaagagcaacata
gcaggcactaatgtaatgtttgcagagataaccttatgtattgctgtaatactggaaaat
gtagctgattctacaagtgaatctaaggaaaaagaaggaggaagtgcttctcttttgcaa
gacgaagcctgtgatatgcctgaaatactgatgaaaacgcctacagagcaattacaaatt
gcttatgaaattctcgaaaaagcacttaatgacatgaacacgtctcggttaatgactctt
ttaccagatggaaagtcaatatttgacagctgctgtatgaaggtggactcaaatgatcag
aatttgaattctgttttgggatgtggtgatgataaaacaggaaccagtaatggttttgta
acagatttacacttggagctcattcaggcccaacatcgagtagctgtgaaacttcttaaa
attacccaaggtgctcaaattgttgacagaagtcctaagtctagtaagtctcatgagaag
aatattgaagatttccaatacttatcagaggaacttatactaaaaaaaattaaaaggaat
aagctatccagagcgatctttttgatgcaaaaggctgcacagaaattccctgaagattta
actactacttcccaaagacagctactggaggaagcactaactttaattgagcaagttgaa
gctgaacaaggtgcattgtatcgcagtctcaaagaagctatgagcagcaagaaaaaaagc
agtactcctcctcctcctctgttactttctagatcacattgctccatgacatttaaacca
gccccatttgattcagatattcaggtttcatggtactgtattttgggctctgtagcagga
ggaagtaatatgaaagtaaggttaaatagcaataaacttcaaaattcaggagaacagata
ccggcagatgggaaaattctcttagaagtacaagggttagatgccaatgagaaatacata
tttgctgtcgcagcatattcttcagatggaaaacttattggggatgccattgggcaaatg
actaagccaatccttgcctatccacccctttctgctactaccgttcgagcatatctaact
caggcagcctatcagacgggcaattttagattagccagagcagcattttcaccaatgtgg
gattactttgtttcagtttcttctccactgcctcccaatgcagctgtaatttctgcaagt
agtaatttgactatatctgaaaaaaggttacgttttgaagctgtatctcagacttctcct
attaccttgaacctctttttgaggaatatatttgctgtttctgatattaatgttgtggaa
ggagcacttttctgtgattccatctgttccaatgagatgttttataaggagcaagtagct
agattagcagaatgtgaaagaatgactgtggcaatggaacttagcacctggttgaacaat
ccaagttacatcctgcagtctgttgtgcaatgttatggtcttcttgccccacttatttat
cacaagattattttagtgccagtagttcagatcctcattaaatgcttggctgttctccaa
gaaattccaagtgctactttgcaaaggggacaggaaggatgttatgagagtattcagcat
atgatagcttgtgcttcatatcatacagcaaaggtactacattcatggaaagagtatgaa
ctttcagcagttatcattaactatgggaaaaaattgttgatcccaccaggagtttcacct
ggccagtcaggaggtgtgaaaactgaagaaacactcactggcaaaaagagacgttcctca
aggtcatctcatttagctgcaatggcaaaagcagcagaaaatctaaatactcttgaatca
agtctcctcaaactgacagaaccaggtcctggaacgcagcttacaggaaaggaatcgcct
ttgttcctctaccctgtaatttcatgttggacgtcagagcgtgcttatactaatttgctt
aaattcagagggcaaaaacgtttccttgagttctttgttcaacttttgcacaaagtcctg
aatgaagagaagtttcagtgtgttctggagtgggcagagggtgttgaagatgacttgaaa
aggaggaacaagaacgtccttggtgctgagggaatttcaacacaagcaagatctctcact
ctgcgagaaagcacacgtgctgcaggagttcagaaagggaagaatacctcaccttcaaag
aaaccaaagacatcacctttaaagaaaccaacaaaaaaagatgtgactaagaaaggacct
ctcagagagtatttaatgaaaaatccagatgcaatgaattctccagaaacacaaaagaaa
ggcaaggataagttgaagaaattagctcatcaaaccttagtgatgctgctgagtaagtat
gtaacccgaaatcagttttgccaaatgtgtcttgaagagatgccctggaggtctcagatg
aatatctatctggcgggtgcacactaccacctatttaaaaagaacctggaagagcaatgc
aatattggaatcagtggttcacagcatctggacagttacaatattttggatcctgagata
ttctcattcaacaattctggcactgtactggcaagagaagctgtagaggataacatagga
aaaccaactccttctctccttgaaaaggcagaagtgactgaaacccaaacctttacaggt
aaatctcctaaaaccagaaataaacagagtcgaactacacaaagtcaaacagcaatgacc
cctgaagaacaggatgagtttccatcaaataccattttactgaagcattttacaagcatc
ttcttgcatttgaaaagagcagtggtacttgctcaccgtggtggccactggacattgctt
caaaatgcttgtcgagagctttggaactatactcaagaatttcaattgattgctaaccag
tcacattcctatatggatgcattgcccatcacctgggattttctttgcaacaccatctgg
ttgccattttattttgcatcagacatgatcattgatatgataattgacctgcaagcaagt
agttctcttaagattgtggatcacgaaggcgacttttgcattcccagctgtttaggaggt
attgtggatgagaatggtggttctaatctttatccccagcctcccctggatgatgtgaac
gtggttgacctgagatggatatgcaatctgattctcaaaacaatagaattgttatatcaa
atgaagaagtgggaagcactggtgcacatagctgtacaatttaacatacttacacatgag
aggttcacagaacaagtgagtccactgctggtgtacgctcagaggcagctgctggagagg
atacagcagttctgtggctcaaacagccatgaatctcatttcacaaaatatctgtctgat
gatgcacaaaagatgagatgcagaaactacatagggtacaaattacagctgcctattgct
cattctgtcagtgaaggagtttttccaggatgctttttcaatcctccaacaaataatgat
tctacagatcacaatcaagcaaaagccctagtttgtgtgcctcttgatgtgaatgataca
ctgaaatgttttacagaaactctagaaaaatctaaatatcaaagcagagcactgagacac
agcaggaaactactttcattgtttcttgcacatacacaggaaaacactggacgagcagtc
agcagtcatatatcttcaaggagaaagctgaaatttagtgtggtagatgaagtgatattt
ctaccgacaccatgtgacctttctcaagaaaaatattatttctccagtatggttgagagt
agaccaataccaaagtcaaagctttcagtaattgtctcttcatatgaacaaacaatagga
atccttgaaatgaataaccagagagacctcaaggtacaggctctacatgaacttggaaat
cttcacttttatgctggaaataaaagagctgcttttaaatactggtgtcaatcccttgat
gaaacactcgacattgctgatgctcttaacacctggcaagaattaagttttccaaaagat
gctagagactgctttgcagttggaatatcaactgaaatgagtcagaaatttctttctcag
gctggagcttggggatgtttacatgcagcagtcctagtggctaagatagctcagtatata
acaacatcaaagatgagattaagaacaaaatactgctatttttctgcgatactttttaag
accctgtttagagcttctcttccgcatccaacatctgactatgactttgtacaatatgaa
acaaatattcttattcctggtattgacctgttctctgatcgctacagagctgatatctct
actgtagttgcaagtctgaatttcattatgcttgaactacattgtgcaaaacaaaattta
ataattttacctcttttcacattataccaatatattgtatctgagatttgtaaggaccca
gctaaatgtattgaaggaagaatcctcaagattaaagtacttgcagatataggatttttt
acggaggcctttcatgagttgtctttgcttatttcgggagtgagaattccatggaaaata
ccagcaggatacagatatactgaaaaaatgcaggccttacagaaatttgactcctcaaaa
tctctcatgattgctacaaatttgcaggtactggaagatacatttaaatggagtctgtct
ttaaccatggtgccactatgcaaccaacaaattatgaataaattaatcttagccaaaatg
catctcataatttgtcttgctgccacaataaataatatacctgaaaaagttgaaaaaaat
gtatactctgttgacaacagcttgccagagccaagcaaaactactgcatcaaatgtaaaa
gttgatgctgatcagggttcaagacaacaggaacaaagagacagaatggtgcgtcttgtt
gactgtaaagatgaattaaatatggccatgctgaaggggattttattgacagaagctgaa
gaaagtcttagctatcttgtacaggacatacaggaaaaatatgatggggacatatctcgg
tattctgtggaagatttagaggctcttattgaggccaaacttgaacttgcttctatttct
cagcaaaggcatcaggcagctctcagtgttgctttggctttctctgcaattcgacttctc
caagatgcaaaagtttttagtgtggacatagcacattttcaagaagaaaagaatggaagg
gagtgtttggactccaccacggaaggtgttccattccctccccgtgtaacagcacgaggg
catgtgaatgtacatttgtggctgaggtgtcgagcaatgttggtcactgcacttgtgaca
cagatatatggtgttggtggtatgaaaggaaatgatgtggctgagcgcagaagtgtgata
aaagaagtaatattagaggcagaagcctttggtgatattgagactcaggctgaaatgatg
gtgcaagctgctattcttgacctgcaagaaaaacgtcctgcggcagacgttaaacttctt
ttgcagaatatcatcggtttactccaagaggatacatttatttccctgccagcttctttg
actcttgtgaaaagtatgcttctgctggcagacatactgctactgcaaatagtagaagac
tcagaacattgcccttctgcagtggaaccattaaacttgcttgttttggcacataagctt
gccattaaagcaatctttgattgtggtgaatccattgaacagcaagaagacagtacattg
acttgcctggtcttacccataaagaatatctacctgccacatattaacttgctagcccaa
gtcaaaatgaaaattggacaaacattagctgaaaaagtagctcctacagctgcaagacat
cccttgcaatggctacatgctctcagacatttagaatcagcattgaatctttgcagagca
tctgcaacaaagaaattagatatggaagctgaacttctttttcagataggtaaggtagaa
cgccagataactgaaacaggcaataacaagtcatctcaagctgttgaaaccctgttggaa
gctattaagctcagccagcaacatgatcaaaaatatgagttaataagacggtcatacctt
gaaatagcactattatatttgtattttgctgaaaataaggaggatgaatcacagacagat
gagtcggtgccttccaaatcaagtaccttttctggagatgggtcttctgaggaggctatg
aaatctgaagtctacaaagcacaagcctggattgcaataagagcagctacacaggtcagt
gaagctgtgcttgcttctcagctgttaattggattgaagagtgttaaagaacagaacatg
aaggatgaagtgcaacaaaaaatcccagaatttgcttctatggatcttttttcttcatac
agagatttcatatctgatggatacaatgttatctctgaaacacccgaagtatcttctgct
gaaaacaaacaaatcacagaagacacctttcaaagtgaaagtgaaggaacagaaagtctt
gttgccaaggtcagccagaagaaagatacagtaacatggattcacatgattcgctactat
aataatttaaaaagaatttataacacaaacctatctggacctggatcactttctgcaaga
gatggacaccttggtttgatttctgacacaggaattgttctacgcattgcagaaatgcat
tccttccttgaaaagaatttatttgaatattcattgtgttgtcttgagaattttccagaa
gaactacgtgatgtagaaatgccactcagtaatgcaactgattcttcagagatgtctctt
gatgtttctgaaagtgtatcagaaatgtcacatgttctgagaatgccttctccagtttct
gttgttgcagaagatgagaagacagagagtagagcagcaagggctccagataaggaaatt
aacattcaatggtatattccttccatggcaaaaccatcaaatgatacagaaatgaaggtt
ttgttgctttatgcttataatacaaaccctgtcaagattagtgacatcagttcaacgtct
gtgttttcaggccacttgtggattccattggctagaattatttctttaagggagaaattg
tctgatgtgaaggagcaagttgaaatattgatgtatggttctaacagcttttcagcttca
gtacctgcaagttctcttgtgcaaaatgaaactttgaaaagaagtcgttcaaataaatcc
aaaagatgtgataggaaactgcatcttgatgataaaacagaagaaattattaaaaggtgt
ttgtctgaagtcaaagcactgctgtctgttgttccagccctgtcctctccattaactgag
atcccatttgatgttactttgcaatcaatagcaaatttgaaagatatgtttgatcttgca
tatggatgtataataactgaaggaagtctttttgattggatcattactctgcttcattaa
DBGET
integrated database retrieval system
