KEGG   Lonchura striata (white-rumped munia): 110469429
Entry
110469429         CDS       T05897                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsr03036]
    110469429 (KDM4A)
Enzymes [BR:lsr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     110469429 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     110469429 (KDM4A)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110469429 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 110469429
NCBI-ProteinID: XP_021383839
UniProt: A0A218VEF3
LinkDB
Position
8:20477008..20499911
AA seq 1053 aa
MASELESLNPGQRIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKSGKQCAEEMETEEMCKEEVDGDETKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADMAEPHERPTSEFGQQGEERIKLPAHVDAAKFEELKPVKPEVEEEQEAAALD
LSISHASNSTSVLPASKQSAASSIQSSSPSYSSDSESSDLLAKRTLPGPAGVFTVHSYAK
GDASGSDSEQTSGKKASSSVNEQELTEVGKEHVSSVKESKKSKGRRQPLSKLPRHHPLLV
KDCISDDEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQPPYCAVC
MLFQAYQAECEGSSQNSGVTPAAADGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEEDGT
SVLITCKNCHVCVHASCYGVSPDKATEDWMCSRCTENALEEDCCLCSLRGGALQRANDDK
WVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHGRC
PTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKHKN
GRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTDGQ
VYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRFTEIFE
EKEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggcttcggagctggagagcctcaacccggggcagcgcatcatgaccttccgccccacc
atggaggagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccggcctggccaagatcgtgccgcctaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccccgcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaggccatgacggtccgcgagttccgtaggatc
gccaacagtgacaagtactgcacaccccggtacacagactttgaagaccttgaacgaaaa
tactggaagaacctcacgttcaatgcccccatctacggggcggatgttaatggcacgctc
tatgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctagatattgtg
gagaatgaaagtggcataaccattgaaggagtgaatactccttacctatattttggcatg
tggaaaacttcctttgcttggcacactgaggacatggatctctacagcattaattacttg
cattttggggaacccaagtcatggtactccatccctccagagcatgggaaacggctggag
agacttgcaaaagggtttttcccaggaagtgcccaaagctgtgaagcatttctccgtcac
aagatgactctcatctctccatcaattctgaagaaatacggaattccatttgataaggtg
acacaggaggctggagagttcatgataacctttccttacagctatcatgctggctttaac
cacggctttaactgtgctgaatctaccaactttgctactcttcggtggattgagtacggg
aagcagtcggtgctgtgctcatgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagaccgttacaagctctggaaagctgggaaggacgtgactgtc
attgaccatgctcttccaaccccagaggcagcagagttccttaaaggggatctcatgcaa
aaagtcaagagtgggaaacagtgtgctgaggagatggaaacagaagagatgtgtaaagag
gaggtggatggggatgagacaaaaagcatccccaagcaccgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccctaaggaggag
ctgagctccacacagtatgaagcggacatggcagagcctcatgagaggcctacaagtgaa
tttgggcagcaaggtgaagaaaggatcaaacttccagctcatgtggacgcagccaaattt
gaagaattgaaaccggtaaaacctgaggtggaagaagaacaagaagcagcggcactggat
ctctccatttcacatgcttcaaattccacttcagtgttgccagcttcaaagcagagtgct
gcatccagtattcagtccagctcaccttcctattcttcagactcggaatcgtctgatctg
ctggcaaaacgaactctccctgggccagccggggtgttcacagtgcacagctatgcaaag
ggggatgccagcggatccgacagtgagcagacttcagggaagaaagccagctccagtgtc
aatgagcaagaactgacagaggtgggaaaggagcacgtgagctccgtgaaggagagtaag
aagtccaagggtcgtcgccagccgttgagcaaactcccccgtcatcacccgctcctggtg
aaagactgcatcagtgatgatgaggcatcagagcagctaactcctgaagaagaggctgag
gagacagaagcatgggccaagccactgagccagctgtggcagaatcggccgccaaacttt
gaggctgaaaaagaatacaatcgcaccatggcccagcagcccccatactgtgctgtttgt
atgctcttccaggcttatcaggcagaatgtgaaggcagcagtcaaaactctggagtaact
ccagctgctgcagatgggaagatccgaacaaaacccctgattcctgaaatgtgctttact
gcaactggctgcagcactgacctcaatctttcaactccctacctggaggaagatggaacc
agtgtactcatcacctgcaagaactgccatgtctgtgttcatgcaagttgttatggtgta
tcccctgacaaggccactgaagactggatgtgctcccggtgtacagaaaacgcgttagag
gaggactgctgtttgtgttcattacgaggaggagcactgcagagagccaatgatgacaag
tgggttcatgtgatgtgtgctgtggctgtactggaggcaaaatttgtgaacatcgcagag
cggagtcctgtagatgttggcaaaatccccctgcaacgtttcagactgaaatgcatcttc
tgcaagaaaaggagaaagagaattgcaggttgctgtgtacagtgttcacatggccggtgt
cccacatcctttcatgtcagctgtgcccaagcagccggagttatgatgcagcctgatgac
tggccatttgttgtcttcattacctgcttcaggcataagactccatctcaagctgagcga
gctaaggctgcactccaggatctgtcccctggacagatagtcatcagtaagcacaagaat
ggtcgcttctatcaatgtgaagtggtcagccttgcaaaggagactttctacgaggtcaac
tttgatgatggctccttcagcgataacctgtacccagaggacattgtgagtcgagattgt
cttcagttaggtccccctgctgaaggggaagtcgtgcaggtgagatggacagatggacaa
gtttatggagccaagtttgtcgcatcacacgctatccagatgtaccaggtggaatttgaa
gatggttcacagctgatggtgaaaagggatgatgtatatactcttgaagaggagcttcct
aagagagtgaagtcaaggctgtcaattgcttcagatatgcgcttcacagagatcttcgaa
gagaaggaggtcagtcaagagaggaagagacaaagagtgatcaattcgcgctaccgtgaa
gattatattgaacctgccttgtaccgggccatcatggagtaa

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