Lonchura striata (white-rumped munia): 110469465
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Entry
110469465 CDS
T05897
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110469465 (MEX3D)
04121 Ubiquitin system [BR:
lsr04121
]
110469465 (MEX3D)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110469465 (MEX3D)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110469465 (MEX3D)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110469465 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
zf-C3HC4_2
zf-C3HC4
KH_DEAH11_2nd
RING_XB3-XBAT31
zf-RING_UBOX
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110469465
NCBI-ProteinID:
XP_021383908
UniProt:
A0A218UR59
LinkDB
All DBs
Position
28:complement(1076611..1088152)
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AA seq
569 aa
AA seq
DB search
MPGSMYQPEPGQPARGPPRCLTLLSPPPPAGQEPPPEPEPGREREGPPGPPAQGEAAALR
FALDQLSLLGLEGAEEPAGGAGPGGLRERERGGGGSPGPAPAPAAGAFGSLAPPLGPPAL
LPEPPASRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFI
VTGRKEDVEMAKREILSAAEHFSMIRATRNKVNGLTGAMQGPPNLPGQTTIQVRVPYRVV
GLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGSF
IDVNADNDFHSNGTDVCLDLQGGAAPWAKAPHPAQRPSAALRNDSLSSLGSGSTESFYSG
RVAAASPTSPYSTFSEPPAPLGSDECDFGFDFLALDLTTPTTTIWSPFERSGNPLQAFSS
CSSINSSQRRNSGPATPRHSPTLPESGAAGLEHPSARRIPSDPAGALAWLPAQGSLSSFS
NSTGYSSSSSLPGSISAASGSPTDSSSSDGHRKSSRECMVCLESEVMAALVPCGHNLFCM
ECALRICGRAQPQCPACHVPATQAIHIFS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctccatgtaccagcccgagcccgggcagccggcccgcggcccgccgcgctgc
ctcaccctgctcagcccgccgccgcccgccgggcaggagccgccgccggagcccgagccc
ggccgggagcgggaggggccgccggggccgccggcgcagggcgaagccgccgcgctgagg
ttcgccctggaccagctctcgctgctggggctggagggcgcggaggagccggcggggggc
gcggggccgggcggcctaagggagcgggagcgcggcggcggcggctccccggggccggcc
cccgccccggccgcgggcgccttcggcagcctggccccgccgctggggccgcccgcgctg
ctgcccgagccgccggcgagcaggaagaagagcgtgaacatgaccgagtgcgtgcccgtg
cccagctccgagcacgtcgccgagatcgtgggccggcaaggctgcaaaatcaaagccctg
cgtgccaagaccaacacgtacatcaagacaccggtcaggggcgaggagccggtgttcatc
gtcactggcaggaaggaggacgtggagatggccaagcgggagatcctctcggccgccgag
cacttctccatgatccgggccacgcgcaacaaagtcaacgggctgacgggggccatgcag
gggccccccaacctgccaggccagaccaccatccaggtgagggtcccctaccgcgtggtg
gggctggtggtgggacccaagggagccaccatcaagcgcatccagcagcagacgcacacc
tacatcgtgacgcccagccgggacaaggagcccgtgttcgaggtgacgggcatgcccgag
aacgtggaccgggcgcgggaggagatcgaggcgcacatcaccatgaggacaggctccttc
atcgacgtcaacgccgacaacgacttccactccaacggcaccgacgtctgcctcgacctg
cagggcggcgcggcgccgtgggccaaggccccccaccccgcccagcgcccctcggccgcg
ctgcgcaacgacagcctgagctccctgggcagcggctccaccgagtccttctacagcggg
cgcgtggcggccgccagccccaccagcccctacagcaccttcagcgagcccccggccccg
ctgggctccgacgagtgcgacttcggcttcgacttcttggccctcgacctcaccacgccc
accaccaccatctggtcgcccttcgagcgctcgggcaaccccctgcaagccttcagcagc
tgctcctccatcaacagctcgcagagacgcaacagcggcccggccacgccgcgccactcg
cccaccctgcccgagagcggggcggcggggctggagcacccctcggcgcgccgcatcccc
agcgaccccgccggcgccctggcctggctgcccgcccagggctcgctctcctccttctcc
aacagcaccggctactcctcctcctcctcgctgcccggcagcatctcggccgcctcgggc
tcgcccaccgactcgagcagctcggacgggcaccgcaagagctcccgggagtgcatggtg
tgcctggagagcgaggtgatggccgcgctggtgccctgcggccacaacctgttctgcatg
gagtgcgccctgcgcatctgcggccgggcgcagccgcagtgccccgcgtgccacgtgccc
gccacccaagccatccacatcttctcctag
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