Lonchura striata (white-rumped munia): 110469471
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Entry
110469471 CDS
T05897
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110469471 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110469471 (REXO1)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
RNases
110469471 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
110469471
NCBI-ProteinID:
XP_021383915
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Position
28:complement(1397973..1440928)
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AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASGASGDPSVGLPLG
HGAERGYDPYNPELPRPSLEVEDGFLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISNTPVSAAGPQNDSFASLEYNPGSYSFNNNSDYNPTPLAAA
GRSSKYTLDSSRSKGSSLEYVPKAVIQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERASDYEDSYSPSRKKLCEDPDDDEVLARFSSSEDEAEVEYKTASC
SSPSKASSESESNEFSSKEQSTKVDGSASQESKEAAQHREDLLNSQKNLAKNSSDKNSKA
AKLCSGKNNKEIENKNKDSKDKTKKKKNDVSKAPGLGEAGKKEKNKNADKDKALKKEEKL
KTKNEEKNCKDKSIKVKTDGNLKKPEKPKSEKVDGYKKEKSKSTTSSSGKSKSEGVTKGT
EKVGSSKKDSQSRTADVKNGKESSGRKNKEKGTKTSLERKKDKVSCAGEGDPKKGRKQQS
LSHVDLFGDESGDEDDKGRPLSSSLLDVSSDLDGTDSGSASDSDKDRRKKVKRSKLSKSS
SSSSTSDDIDYSILEKDVDFETDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKT
EDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRPPTAQEVCYQRIQLAQQQAAQLVG
TVQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATVGGRSVTPSNDSEAPTLPLKPC
TLAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
AGRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGSCIRKEECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIREDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctaaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccacttccgacaccccccggtggcc
ccggcgccgtgcggagcctccggagcctcgggcgaccccagcgtggggctcccgctcgga
cacggcgcagagcgaggctatgatccctacaaccctgagctgcccaggccctcgctggag
gtggaggatggctttctggctgacatcacagatgtcacacctggaattctggagctggag
ctggtcaacaaggccattgaggcagtgaagaacgaagtggagagggagcagaagaagtat
gaggagctgctggaaaccacaaaggagtttggtgcttcagagggctcctcactgatttca
aacacacctgtgtcagctgctgggcctcagaatgattcctttgcctcattggagtacaat
ccagggagctacagcttcaataataactcagactacaaccccactcctctggctgctgct
ggccgatccagtaaatacactttggattcctcccgctccaaagggagctcactggaatat
gtccccaaggctgtaatacagaataaaaaatacagcagcactgtcactaacaacaaatac
gtgattgatgactccaagccttccacagacttggaatatgaccccctttccaattactct
gccaggctgttgggcaaagccacaaccaagggctccaaaagggaaagggcctctgattat
gaggactcctactctccatcacggaagaagctctgcgaagatcccgatgatgacgaggtg
ttggccaggttctcctcctctgaagatgaggctgaggtagaatataaaacagcttcttgt
agttcaccctcaaaagctagttctgagagtgagtcaaacgagttctccagcaaagagcag
agcacaaaagtggatggctctgcttcccaggagagcaaagaagcagcacagcacagggag
gaccttctaaattcacagaaaaaccttgccaagaactcgtccgataagaactcaaaggca
gcgaagttgtgttctggtaagaacaacaaggaaattgaaaataaaaacaaagactccaaa
gacaaaacaaaaaagaagaaaaatgatgttagtaaagcaccaggcctcggtgaggctggg
aagaaggagaaaaataaaaatgcagacaaagacaaagcgctcaagaaagaagaaaaatta
aaaaccaagaatgaagagaaaaactgcaaagacaaaagcatcaaagtgaaaacagatggg
aacttaaagaaacctgaaaaaccgaagtcagaaaaagtggatgggtataagaaagaaaaa
tccaagtccaccaccagcagttcagggaaaagcaagagcgagggtgtcaccaagggcaca
gagaaagtggggagcagcaagaaggattcgcagagcagaacagctgatgtgaaaaatggc
aaggaaagctctggtcgtaaaaacaaggagaaaggaaccaagacctccctggagcgaaag
aaagacaaggtcagttgtgcaggagaaggagaccccaagaagggtcggaagcagcagagt
ttgagccacgtggacctgtttggagatgagagtggagatgaggatgacaaaggccggcct
ttgtcctcctcgttgcttgatgtgagctcggacttggatgggactgactctggctcagcc
tctgacagtgacaaggacaggaggaagaaagtgaagcgctcaaagttgtccaagtcatca
tcatcttcctcaacatctgatgacattgattattccatccttgagaaagatgtggacttc
gagacggatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtgaaaact
gaagacaagggaaggctgggcaaacagccttccaaagaggaagcaaatgaagaaaagaca
gaagataatttaactaccttgtttcctggacaaaaaagaaggatctctcatcttgtcaaa
caaggaaatgcagaggccccgagcaagccggtggtgcggccctaccgtccccccacggcc
caggaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggttggg
actgttcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgcca
aatgcagccctcaccgcagcagccaagcaaagcctcgggagcagtaaggcgactgttggt
ggcaggagtgtcacaccttccaatgactctgaagcccccacccttcctctgaagccttgc
accttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacat
gttccctccttacagagcaccactttacagaggcctgttattcccacagaatttggtgct
aaagtcccaaccaacattcgccagaggtatctcaatctcttcatcgatgagtgcctgaaa
ttctgctcctcatcccaggaagccttcgacaaggccctggcagaggagaaggtggcctac
gagcgcagcaccagtcgcaacatctacctgaacgtggctgtgaacaccctgaagaagctc
cgcagcctcgtgcccaactccccagccagcaccaacaagacaagtaacaagaaggtggtg
tcccacgaggctgtgctgggagggaagcttgctgccaagaccagcttcactctgaaccgc
tcagggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggag
tacctgatgactgaggagcagctcaaggagaacgggtacccaatgcctcaccctgagaag
gctggacgtgctgtgctcttcactgcagaggagaagaaagtgattgactcctcgtgcagg
atctgctgtcgctgtggcaccgagtacatggtctcagcctcggggagctgcatccgcaag
gaggagtgtgtgcatcactgggggcggctgcgcaagcagagagtgccaggtgggtgggaa
acccactacagctgctgctctggagctgtggggtcaccaggctgccaggttgctaaacaa
cacgtgcacgacgggcgcaaggagagcctggatgggtttgtgaagacttttgagaagctg
cccacgactgatggctatcctgggatctacgccttagactgtgaaatgtgctacactaag
caaggactggagctgacaagggtaactgtgatcaactcggagctgaaagtggtgtacgac
acctttgtcaagccagactccaaggtggtggattacaacaccagattctcaggtgtgaca
gaggaggacctggaaaacacgagcatcaccctgcgggatgtccaagccgtcctactgaac
atgttcagtgcagacaccattctgatagggcacagcttggaaagcgacttatttgcacta
aagctgatccatggcaccgtggtggacacagccatcgtgttcccccaccgcctggggctg
ccctacaagcgggccctgcgcacgctgatggccgactacctcaaacgcatcatccaggac
aacgtggaaggacacgactccagtgaggatgccagagcctgcatggagctgatggtgtgg
aagatcagagaggatgccaaggtgaagcgatga
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integrated database retrieval system