KEGG   Lonchura striata (white-rumped munia): 110469533
Entry
110469533         CDS       T05897                                 
Symbol
SDC3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04514  Cell adhesion molecule (CAM) interaction
lsr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110469533 (SDC3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110469533 (SDC3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lsr00535]
    110469533 (SDC3)
Proteoglycans [BR:lsr00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   110469533 (SDC3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 110469533
NCBI-ProteinID: XP_021384051
LinkDB
Position
23:complement(1039511..1092169)
AA seq 422 aa
MPGEVPPPAPRGLRSLPLLLLLLLGARAALAQRWRNENYERPVDLEGSGDDDPFGEDELD
DIYSGSGSGYFEPEPGLDTAVSLTTDTLVTLPTTAAVLPVTAAQPVATPLEPSPTPQDTT
PGQATSTFLIPRTTEAPVVPSWKATTTSTTASEPPTTTATTTTTMATTTTTTTTTEATTT
TSSTTVATAKPTTIRRFLPPLATKAATTRATTLETPTTPVPETSMPTEVATARLVPTSMA
KPRALPKPSTSRTAELPEKSTALPPTATTLPPTEAPQMEPGEVTTAPDKEPEVPASSGPS
GDFEIREEEETTRPDLGNEVMAVVTPPAAPGPGRNVETGLMDNTIDSGNSAAQLPQKNIL
ERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQANVTYQKPDKQEEF
YA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcccggggaggtgccgccgccggcgccccgggggctgcggagcctcccgctgctgctg
ctgctgctgctcggcgcccgcgccgcgctggctcagcgctggcgcaatgagaactacgag
aggcccgtggacctggagggctccggggacgacgacccctttggagaagatgagctggat
gacatctactccggctctggctcggggtattttgagccggagccggggctggacacggcc
gtgagcctgaccacggacacgctggtgacgctgcccaccacggcggccgtgctgcccgtc
accgctgcccagcctgtggcaacgcccctggagccatcccccacccctcaggacaccacc
cccgggcaggccaccagcaccttcctcatccccaggaccacagaagcgccggtggtgccc
agctggaaagccaccaccaccagcaccacggccagcgagcccccaaccaccacggccacc
accaccactaccatggccaccaccaccaccaccaccaccaccacggaggccaccacgacc
acgagcagcaccaccgtggccacggccaagcccaccaccatccggaggttcctgcccccc
ttggccaccaaggcagccaccacccgggccaccaccctggagacccccaccacacccgtc
cccgaaaccagcatgccaacagaggtggccacggcacgccttgtccccaccagcatggcc
aagcccagggccctgccaaagcccagcacctcgaggactgcagagctccccgagaaaagc
acggccttgccacccacggccaccacgctgccgcccacagaggctccccagatggagcca
ggggaggtgacaacagcccctgacaaggagccagaggtcccggccagcagcggccccagc
ggggacttcgagatccgggaggaggaggagacgactcgccccgacctcgggaacgaggtg
atggccgtggtgacgccgccggcggcgccggggcccggcaggaacgtggagacagggctg
atggacaacacgatagactcaggcaactcggctgctcagctgccccagaaaaacatcctg
gagaggaaagaggtgttgatagcggtcatcgtgggtggcgtggtgggcgcccttttcgcc
gccttcctggtgatgctgctcatctaccgcatgaagaagaaggacgagggcagctacacc
ctggaggagcccaagcaggccaacgtcacctaccagaagcccgacaagcaggaggagttc
tacgcgtag

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